A wrapper for Apache UIMA (http://incubator.apache.org/uima/) that connects to the Open Biomedical Annotator (OBA) rest service from the National Center for Biomedical Ontology (http://www.bioontology.org/wiki/index.php/Annotator_User_Guide).

Features

  • Submits text to the OBA rest service and creates UIMA annotations
  • OBA rest service parameters are configurable
  • UIMA installation is not necessary as the maven build installs UIMA dependencies
  • Sample UIMA pipeline configuration is provided

Project Activity

See All Activity >

Categories

Bio-Informatics

License

Public Domain

Follow UIMA Wrapper for the OBA Rest Service

UIMA Wrapper for the OBA Rest Service Web Site

Other Useful Business Software
8 Monitoring Tools in One APM. Install in 5 Minutes. Icon
8 Monitoring Tools in One APM. Install in 5 Minutes.

Errors, performance, logs, uptime, hosts, anomalies, dashboards, and check-ins. One interface.

AppSignal works out of the box for Ruby, Elixir, Node.js, Python, and more. 30-day free trial, no credit card required.
Start Free
Rate This Project
Login To Rate This Project

User Reviews

Be the first to post a review of UIMA Wrapper for the OBA Rest Service!

Additional Project Details

Intended Audience

Science/Research

Programming Language

Java

Related Categories

Java Bio-Informatics Software

Registered

2010-03-12