Search Results for "research database" - Page 6
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Showing 474 open source projects for "research database"
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TopiaryExplorer has moved to GitHub. Find the new project info page here: https://github.com/qiime/Topiary-Explorer. If you need help or would like to add a bug/feature request, please do so there.
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NanocalcFX
Open Source Data Evaluation Software
NanocalcFX is a free and open source evaluation software for a simple yet comfortable solution to deal with thousands of transport kinetics measured with a fluorescence microscope or similar kinetics. Data can be imported from CSV or Excel files or using the dedicated image stack analyser (NISA). You can get sample data at the nanocalcFX homepage. Note that nanocalcFX is currently in a beta state. -
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Framework for text mining, data integration and data analysis. Keywords: ontology and graph alignment, relation mining, warehouse, semantic database integration, bioinformatics, systems biology, microarray, Java.
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E.N.M.L. means Environmental Noise Model Language. The target of the project is the definition of a XML specification model mainly devoted to electronic acoustic data exchange. ENML aims to format ANY kind of noise measurement.
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The Java Context Directory (JCD) is an information system to store and use contextual information. It enables a software developer to create context-aware applications and provides a client for mobile devices.
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The LabLog is a free tool to document projects running in a lab and to manage experimentally obtained data and its metadata. LabLog interfaces to a mySQL database that stores this information. Allows easy searching and retrieval of once recorded data.
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astroDevice
Software platform for the control of astronomical instruments.
astroDevice is a software platform for the control of astronomical instruments (telescope mount, filter wheel, focuser and CCD) through a single interface. This platform manages any astronomical device through plug-ins. It can manage multiple devices of same type (eg two telescope mounts). astroDevice is an alternative to ASCOM and INDI by providing a common interface between each device type and astronomy software such as Starry Night, KStars, Skychart and Stellarium. The platform is based... -
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LExAu: Learning Expectations Autonomously. Library for on-line data driven statistical machine learning.
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Snifflib Numerical Library
Open-source computational library written in pure JAVA
The Snifflib numerical library provides honest-to-goodness N-dimensional array construction and manipulation along with standard linear algebra functionality as well as statistics and computational routines in the JAVA language. -
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locusvu
Tool for genomics;automates data retrieval from db;enables workflows
LocusVu is a novel Java based software tool that accepts a list of genomic loci (positions on the chromosome) as input and automates fetching of related information (cytogenetic band, gene name, OMIM data etc.) from public databases such as the UCSC genome browser database. It then enables multiple workflows on the retrieved results, like comparing multiple datasets (comparative genomics), viewing neighboring genes for a loci from within the tool itself, or graphically representing these... -
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Myrtle
A simple programmable spreadsheet for learning statistics.
Myrtle is a simple programmable spreadsheet and statistical analysis software specifically designed for learning statistics. It provides the standard spreadsheet functionality one would expect like multiple tabbed sheets, relative and absolute row and column referencing in formulas, and a large catalog of built-in functions. Functions specific to logic and computer science, mathematics, probability, and statistics are available. Student's can easily create, customize, and update plots and... -
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is-sfe
Information System "Supercritical Fluid Extraction"
Information System "Supercritical Fluid Extraction" has developed as tool for collecting and analyzing the experimental data from various supercritical fluids experiments. The final target is to help to scientists who worked with supercritical fluids to predict some useful properties such as density, solubility etc. In order to calculate molecular descriptors, parse SMILES and another applied purposes is used Chemistry Development Kit (https://sourceforge.net/projects/cdk). -
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ECG2HRV
import and store ECG, associate to clinical data, automatic HRV
http://www.youtube.com/watch?v=AOzpNMC-FXU This multi-platform application will enable the user to import digital CSV ECGs at any sampling rate and store them in an encrypted local DB along with relevant clinical data of the patient. It also performs automatic QRS complex detection and RR interval classification showing the output in a visual chart that the user can edit to correct sources with artifacts or pats with bad detections. This project was developed using Netbeans 7.3... -
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iBRAIN2 Workflow Manager
A system for automated analysis and data handling for RNAi screens
The iBRAIN2 software system for RNAi high-content screening integrates automated analysis and customizable data management. It enables robust and complex parallel processing on computer cluster infrastructure and allows for reliable storage of primary and resulting data sets. -
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PARSEC - PAtteRn SEarch / Context
PARSEC - PAtteRn SEarch and Contextualization
The characterization of genomic sites is a major challenge in the understanding and exploitation of next generation sequencing data. Most genomic sites are represented by short, degenerated motifs with a scattered distribution and sometimes with biological function (ex: regulation of gene expression, splicing patterns or epigenetics signals). These motifs are associated with a huge amount of noise and thus, the development of a computational platform for accurate detection of genomic sites... -
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CorpusSearch finds syntactic structures in a corpus of annotated sentence trees. It can be used as a research tool on a corpus, or as a development tool for building the corpus.
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Information Retrieval Service Assessment
IRSA is a toolkit for Information Retrieval Service Assessment.
IRSA is a toolkit for Information Retrieval Service Assessment. It builds upon the Grails Web Framework and is developed at GESIS. It implements two main functionalities: (1) A number of showcases that show the implemented services like a so-called Search Term Recommender and different science-model based ranking mechanisms and (2) an IR assessment module that let's one do an interactive evaluation of the retrieval services. All implemented services are available via well-documented... -
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Open-source weather database system for storage of weather/water observations, forecasts, analysis fields, and hindcasts. includes loading program for GRIB files. Visit project website (http://wdb.met.no) for further information. Please note: this project has now moved to http://wdb.met.no
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Technical analysis library with indicators like ADX, MACD, RSI, Stochastic, TRIX... includes also candlestick pattern recognition. Useful for trading application developpers using either Excel, .NET, Mono, Java, Perl or C/C++.
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Semantic query optimization (SQO) is the process of finding equivalent rewritings of an input query given constraints that hold in a database instance. We present a Chase & Backchase (C&B) algorithm strategy that generalizes and improves on well-known methods in the field. The implementation of our approach, the pegasus system, outperforms existing C&B systems an average by two orders of magnitude. This gain in performance is due to a combination of novel methods that lower the complexity...
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Sphaerica
Interactive spherical geometry software.
Sphaerica is an interactive spherical geometry computer software. You can create complex geometric constructions in spherical geometry with this software. It supports orthogonal, stereographic and gnomonic projections to display your construction. It also has a built in scripting language for automated constructions. -
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Onco-STS
A web-based Laboratory Information Management System
Onco-STS is a web-based Laboratory Information Management System for sample and analysis tracking in oncogenomic experiments. The systematic sequencing and analysis of tumour samples, as well other oncogenomic experiments, necessitates the tracking of relevant sample information throughout the investigative process. These meta-data of the sequencing and analysis procedures include information about the samples and projects as well as the sequencing centers, platforms, data locations,...
