Jiddu Krishnamurti's Book of Life|Libro de la Vida
Autoplot is an interactive browser for data on the web
Converts cobol copybooks to Xml/Java objects
Java science library.
Virtual Satellite
Queueing Theory Algorithms
MiRDeep*
An Interactive Visualisation for Tabular Data
Precision Trigonometry: Advanced Calculator for Complex Math
Tools for integration and analysis of heterogeneous immunological data
Spatial Statistics Libraries & Tools for GeoTools, GeoServer, uDig
Open source cross-platform Java Visual Traceroute
The Component Library Sorcerer
ProStack - a platform for image processing and analysis
A powerful simulation for designing femtosecond lasers and amplifiers.
BoPlanets shows planets relatively to an observing planet.
Symja - Java computer algebra language & symbolic math library
JavaScript-Based Molecular Viewer From Jmol
Optical Design Software for simulating systems of lenses, prisms, etc.