Showing 4570 open source projects for "java open source"

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  • 1

    javaGeom

    A geometry library for Java

    A java library for geometry applications. Provides a general framework for manipulating and creating geometric primitives, computing intersection points between shapes, composing them to create new shapes, and performing some measurements. Important note: the repository has now moved to GitHub: https://github.com/dlegland/javaGeom Please update bookmarks!
    Downloads: 4 This Week
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  • 2
    xAffect

    xAffect

    Sensor Middleware

    xAffect is a software framework for online recording, processing and storage of multi sensor data. It was developed at FZI Research Center for Information Technology, Karlsruhe, Germany. xAffect can be used as a flexible, customizable middleware between physiological sensors and applications which require online feature computation (e.g. biofeedback or affective computing). Moreover, it can also be used as a standalone application for data acquisition and visualization.
    Downloads: 0 This Week
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  • 3

    picard

    A set of tools for working with high-throughput sequencing data

    A set of tools (in Java) for working with next generation sequencing data in the SAM/BAM format. Note that development has moved to GitHub at https://github.com/broadinstitute/picard and support is available on the GATK forum at http://gatkforums.broadinstitute.org/categories/ask-the-team
    Downloads: 2 This Week
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  • 4
    Geoportal Server
    Geoportal Server is a standards-based, open source product that enables discovery and use of geospatial resources including data and services.
    Downloads: 0 This Week
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  • 5
    ECMOjo is a simulator and trainer for extracorporeal membrane oxygenation (ECMO). ECMOjo consists of a graphical user interface to allow interaction and train ECMO practitioners.
    Downloads: 3 This Week
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  • 6
    GenoCAD
    ...This application provides a web-based tool to design plasmids, artificial gene networks, and other synthetic genetic systems composed of standard genetic parts. It includes a parts management system, a rule-based design tool, and a simulation engine. This project has morphed into a SaaS model. The open source code is no longer maintained.
    Downloads: 0 This Week
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  • 7

    JUnit Execution & Report Generation Tool

    Runs JUnit Test cases and generate HTML report, keeps past run history

    ...They just need to put their test case folder to the class path - Since it keep the test result data in a database, it can keep history of any number of past execution result. This build is bundled with open source embedded database HSQLDB. User may also use other database or their choice - The HTML report can also include previous run results. Number of last run result to include in report is user configurable - Flexible and de-coupled design
    Downloads: 2 This Week
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  • 8

    Deem

    Analyze time-course data with significance tests, clustering, modeling

    Use statistical methods to analyze time-course data (gene expression microarray and RNA-seq data in particular, but not limited to). Apply significance tests to filter out only significant genes or time series. Cluster time series into similar groups. Generate network models, including linear or non-linear models. Variable selection and optimization routines included. Written in Scala and R. The application is a cross-platform desktop app with a simple GUI and is fully functional...
    Downloads: 0 This Week
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  • 9
    microtransat
    A project to host code developed for the Microtransat challenge, a race between autonomous sailing robots. This project is intended for both supporting code such as tracking systems and robot control systems or parts of robot control systems.
    Downloads: 0 This Week
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  • 10
    novaforjava

    novaforjava

    novaforjava is a general purpose, Celestial Mechanics, Astrometry lib

    novaforjava is a general purpose, double precision, Celestial Mechanics, Astrometry and Astrodynamics library. The intended audience of libnova is java programmers, astronomers and anyone else interested in calculating positions of astronomical objects or celestial mechanics. It is a reimplementation of libnova with is the calculation engine used by the Nova project and most importantly, is free software.
    Downloads: 0 This Week
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  • 11

    InfoSim

    A Java Framework for Simulating Information Theory Concepts

    This is a Java Framework which allows to design and simulate Channels, Cryptography algorithms, Coding algorithms, Noise analysis, Information sources and destinations, etc. It supports both Classical and Quantum Information Theory fields. It also allows to design a new Information Scheme from scratch. It has a big Math library which supports Abstract and Linear Algebra objects e.g Hilbert spaces.
    Downloads: 0 This Week
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  • 12
    Mushrooms

    Mushrooms

    See you and your friends on a map

    (Former project name was Geo5.) It was never easier to share your position with friends. Just open http://jfellow.net/geo5/ and see you and your friends on a map. (http://jfellow.net/geo5/ is a test server. You can download and install your own server. It's open source.) - Build groups, all group members see each other automatically. - No registration, no installation, no spyware. - Advanced: Tracks, routing (planned).
    Downloads: 0 This Week
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  • 13
    Energistics Transfer Protocol

    Energistics Transfer Protocol

    Real-time Low Latency High-Frequency data streaming API

    This project contains the working artifacts for the development of the Energistics Transfer Protocol. There is NO Wiki. To review documentation, clone or download the repository and look in the documentation directory. You can access on line using the [Browse Code] button.
    Downloads: 0 This Week
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  • 14
    G-CNC Sender

    G-CNC Sender

    GCode sender for ramps and marlin firmware for CNC Milling Machine

    GCode sender for ramps and marlin firmware for CNC Milling Machine 3D preview RS232 and RS232 over TCP drivers Full GComands control, disable, replace, pause. Full machine control Remap XYZ coordinates GComands description After install select Help->Check for updates..
    Downloads: 1 This Week
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  • 15
    Open Source project for the development of the IEEE 11073-20601 reference implementation.
    Downloads: 0 This Week
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  • 16
    Agent.GUI

    Agent.GUI

    The Project moved to github https://github.com/EnFlexIT/AgentWorkbench

    The project has moved to github https://github.com/EnFlexIT/AgentWorkbench Agent.GUI is a simulation framework and toolkit based on the JADE framework. It provides functionalities for time aspects, agent-environment interaction, visualization and load balancing, Furthermore, the included application focuses the usability for end users.
    Downloads: 1 This Week
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  • 17
    Open HLA (oh-la) provides an open-source implementation of the HLA RTI spec 1.3, IEEE 1516 and IEEE 1516 Evolved. It also provides a framework to wrap the standard RTI classes and FOM to code generation to make life simpler.
    Downloads: 0 This Week
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  • 18
    CIG-P

    CIG-P

    CIG-P is a simple yet flexible data visualization tool

    CIG-P is a higher order visualization tool for AP-MS which generates intuitive circular diagrams for visually appealing final representation of AP-MS data. CIG-P can be used to compare a) different AP-MS datasets of various baits or b) a particular bait under various perturbations (lenticular section CIG-P). The output of CIG-P is a simple and intuitively easy to grasp visualization of a complex dataset. Publication: CIG-P: Cicular Interaction Graph for...
    Downloads: 0 This Week
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  • 19

    Khawas

    An Arabic Corpora Processing Tool

    The new version is available at https://sourceforge.net/projects/ghawwasv4/
    Downloads: 0 This Week
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  • 20
    vipR is a program to screen for sequence variants (SNPs, deletions) in sequence data generated by high-throughput-sequencing platforms. Information on this and other projects can be found on: http://www.altmann.eu
    Downloads: 0 This Week
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  • 21
    Coulson Plot Generator

    Coulson Plot Generator

    Graphics generator for pie diagram matrix from spreadsheets

    For comparative plus/minus spreadsheet data, Coulson Plot Generator application creates a multiple pie diagram, for a rapid visual comparison of subunit occupancy across a range of entities. Numbers of pies, segments, labels and colours are customisable. Creates an editable PDF from a comma separated text file. Now with zoom capability and more memory, for larger datasets. Save images in several formats including SVG.
    Downloads: 0 This Week
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  • 22
    GeoGit

    GeoGit

    Geospatial Distributed Version Control System

    NOTE: this project has been renamed as GeoGig. Use this URL to get to the GeoGig downloads: https://sourceforge.net/p/geogig Welcome to the GeoGit project, exploring the use of distributed management of spatial data. GeoGit draws inspiration from Git, but adapts its core concepts to handle versioning of geospatial data. Users are able to import raw geospatial data (currently from Shapefiles, PostGIS or SpatiaLite) in to a repository where every change to the data is tracked. These changes...
    Downloads: 0 This Week
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  • 23
    A Java toolkit for the creation of physics simulations and 3D visualizations. Developed as part of the Technology Enabled Active Learning (TEAL) initiative at MIT.
    Downloads: 0 This Week
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  • 24
    xeo is a free (GPLv3) open project management for nanostructures using Java
    Downloads: 1 This Week
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  • 25

    IQuant

    A pipeline for quantitative proteomics based upon isobaric tags

    IQuant is an automated pipeline for quantitative proteomics based upon isobaric tags. It integrates post-processing tool of protein identification and advanced statistical algorithms to process the MS/MS signals generated from the peptides labeled by isobaric tags for quantification. IQuant can run from a graphical user interface (GUI) as well as a command-line interface and work with both Windows and Linux system. This website contains the IQuant software, an example data labeled by...
    Downloads: 0 This Week
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