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Showing 64 open source projects for "proxy http https"
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Elexis Praxisprogramm
An Eclipse RCP program for all aspects of a (Swiss) medical practice
An Eclipse RCP program for all aspects of a medical practice: electronic medical record (EMR), laboratory findings etc., as well as accounting, billing (swiss TARMED-System, other systems to be developped) and other daily work. A fully functional version may be downloaded via http://download.elexis.info/3.1.0. Users may optionally include a demo database to have a playground for experiments. See also http://wiki.elexis.info/Installation_Elexis_3.0_OpenSource Elexis 3.1.0 was released on May, 4 2017. At http://elexis-forum.ch/ users have a place to share their experiences with other peoples. Developers and anybody trying to compile Elexis from scratch should look at https://github.com/elexis/elexis-3-core/tree/master/ch.elexis.sdk The documentation is found under http://wiki.elexis.info/ -
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DORY
For mining KASH proteins (SUN domain-interacting proteins)
....*** Please see the following publication for detail: Zhou X, Graumann K, Wirthmueller L, Jones JDG, Meier I (2014) Identification of unique SUN-interacting nuclear envelope proteins with diverse functions in plants. The Journal of Cell Biology 205(5):677-692. http://jcb.rupress.org/content/205/5/677.full Please see other useful tools for biology research: https://sourceforge.net/projects/cloversystem/?source=directory -
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SmartHMA
Mobile implementation of HMA standardised EO data sources
...Implementation focuses on accessing the ESA Fedeo environment SmartHMA in form of open source software allows complementing the ESA RSS system environment and ESA Fedeo platform (http://wiki.services.eoportal.org/tiki-index.php?page=FEDEO). Please visit wiki pages for more information: http://wiki.services.eoportal.org/tiki-index.php?page=SmartHMA or http://wasat.github.io/smarthma SmartHMA User Manual https://sourceforge.net/projects/smarthma/files/SmartHMA_user_manual.pdf Youtube Manual https://goo.gl/bvP5yz -
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...Includes a PreCapture barcode application refactored from this code base with support from the US National Science Foundation ADBC TCN for New England Vascular Plants NSF #1208835 Precapture Application: http://doi.org/10.5281/zenodo.154176 Migrated to GitHub PreCaptureApp: https://github.com/MCZbase/PreCapture Desktop App https://github.com/MCZbase/DataShot_DesktopApp Web App components: https://github.com/MCZbase/datashot_ejb https://github.com/MCZbase/datashot_web https://github.com/MCZbase/datashot_ee
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Cloud-based help desk software with ServoDeskWhat if You Could Automate 90% of Your Repetitive Tasks in Under 30 Days? At ServoDesk, we help businesses like yours automate operations with AI, allowing you to cut service times in half and increase productivity by 25% - without hiring more staff.
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Virtual Cell
Former home of the Virtual Cell platform (VCell), see http://vcell.org
This project and all source code has moved to GitHub, see https://github.com/virtualcell -
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Abc-Map
http://abc-map.fr
Tutorials and help: http://abc-map.fr New version coming soon ! https://github.com/remipassmoilesel/abcmap2 -
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Visualization of Protein-Ligand Graphs
Compute protein graphs. Moved to https://github.com/MolBIFFM/PTGLtools
NOTE: Project moved to https://github.com/MolBIFFM/PTGLtools. The Visualization of Protein-Ligand Graphs (VPLG) software package computes and visualizes protein graphs. It works on the super-secondary structure level and uses the atom coordinates from PDB files and the SSE assignments of the DSSP algorithm. VPLG is command line software. If you do not like typing commands, try our PTGL web server: http://ptgl.uni-frankfurt.de/ -
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jvqa
Video Quality Assessment in Java
jvqa 1.0-alpha-8 March 3, 2015 Video Quality Assessment in Java. Built upon Java Native Access for Avisynth - jnavi (https://sourceforge.net/projects/jnavi). Based on the Fast Structural Similarity index proposed by Chen and Bovik: http://live.ece.utexas.edu/publications/2011/chen_rtip_2011.pdf Implements the original, variance-based SSIM, Multi-Scale SSIM, Fast SSIM, 2, 3 and 4-Component Weighted SSIM, and Gradient Magnitude Similarity Deviation. -
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Science & Engineering Inventory
Rediscover the Simplicity http://www.atgclabs.com/
Request new Lab Inventory feature or module and receive a free Single User version with new feature. Help us to improve Lab Inventory. We want to hear your feedback! https://www.atgclabs.com/products/li The Lab Inventory System is an innovative, easy to learn full-featured solution for research laboratories. You can quickly and easily upload your existing Excel based inventory and get started in minutes, manage laboratory inventory, place orders and keep track of them in one... -
Smart Business Texting that Generates PipelineTextUs is the leading text messaging service provider for businesses that want to engage in real-time conversations with customers, leads, employees and candidates. Text messaging is one of the most engaging ways to communicate with customers, candidates, employees and leads. 1:1, two-way messaging encourages response and engagement. Text messages help teams get 10x the response rate over phone and email. Business text messaging has become a more viable form of communication than traditional mediums. The TextUs user experience is intentionally designed to resemble the familiar SMS inbox, allowing users to easily manage contacts, conversations, and campaigns. Work right from your desktop with the TextUs web app or use the Chrome extension alongside your ATS or CRM. Leverage the mobile app for on-the-go sending and responding.
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yacas
Computer calculations made easy
NOTE: Yacas and yagy development has moved to github. The new repositories are located at https://github.com/grzegorzmazur/yacas and https://github.com/grzegorzmazur/yagy . The mailing list has been moved over to https://groups.google.com/forum/#!forum/yacas . The downloads section at sourceforge will be kept up to date for the foreseable future. Yacas is an easy to use, general purpose computer algebra system. It uses its own programming language designed for symbolic as well as arbitrary-precision numerical computations. ... -
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Cell Culture
Rediscover the Simplicity http://www.atgclabs.com/
Help us to improve Cell Culture. We want to hear your feedback! Request new Cell Culture feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/fw Cell Culture is a highly specialized protocol-driven system designed to support development of the cell lines. Cell Culture manages activities related to the growth and maintenance of cell lines, provides stable cell lines development and incorporates laboratory methods facilitating... -
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Lab Studies
Rediscover the Simplicity http://www.atgclabs.com/
Help us to improve Animal Studies. We want to hear your feedback! Request new Animal Studies feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/lp The Animal Studies stores and handles three classes of information: animal growth, phenotype screening and genotype analysis. Animal Studies requires minimal computing skills. Genetic and physiological data can be entered either manually or automatically when automated genotyping... -
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Lab Processes
Rediscover the Simplicity http://www.atgclabs.com/
Help us to improve Lab Processes. We want to hear your feedback! Request new Lab Processes feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/lp Lab Processes is a comprehensive and straightforward application specially designed for biologists and chemists who need to conduct a wide variety of tests and experiments on animals. Lab Processes requires minimal computing skills. Genetic and physiological data can be entered either... -
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Lab Storage
Rediscover the Simplicity http://www.atgclabs.com/
Help us to improve Freezer Web Access. We want to hear your feedback! Request new Freezer Web Access feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/fw Freezer Web Access is a user friendly program designed to assist researchers with establishing an efficient system for storing frozen biological samples. FWA can track all of your research, development and process scale-up data in a single data storage platform, providing a... -
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Sample Tracking
Rediscover the Simplicity http://www.atgclabs.com/
Help us to improve Freezer Web Access. We want to hear your feedback! Request new Freezer Web Access feature or module and receive a free Single User version with new feature. https://www.atgclabs.com/products/fw Freezer Web Access is a user friendly program designed to assist researchers with establishing an efficient system for storing frozen biological samples. FWA can track all of your research, development and process scale-up data in a single data storage platform, providing a... -
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SEPIA: Security-oriented PN Framework
Petri net framework for security related modeling and reasoning.
...To support information flow analysis of processes, SEPIA defines so-called IF-Nets, tailored for security-oriented workflow modeling which enable users to assign security-levels (HIGH, LOW) to transitions, data elements and persons/agents participating in the process execution. SEPIA builds upon TOVAL (http://sourceforge.net/p/toval), JAGAL (http://sourceforge.net/p/jagal) and SEWOL (https://sourceforge.net/projects/jawl/). To use SEPIA, make sure these libraries are on the build path. SEPIA encloses the Multi Schema Validator (https://msv.java.net/) and isorelax (http://iso-relax.sourceforge.net/) The documentation can be found under http://doku.telematik.uni-freiburg.de/sepia. -
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SEWOL: Security-oriented Workflow Lib
Java Library for workflow handling
...In order to specify security-related context information, SEWOL provides access control models such as access control lists (ACL) and role-based access control models (RBAC). SEWOL uses and encloses the following libraries: - TOVAL (http://sourceforge.net/p/toval), - JAGAL (http://sourceforge.net/p/jagal), - OpenXES (http://www.xes-standard.org/openxes/), - Spex (http://code.deckfour.org/Spex/) - Google Guava (https://github.com/google/guava), - xstream (http://xstream.codehaus.org/) and - graph-impl and visualization components of Jung 2 (http://jung.sourceforge.net/). ... -
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JAGAL: Java Graph Library
Java graph library
JAGAL provides implementations for directed graphs (weighted and unweighted) and varoius types of transition systems as well as utils for graph traversal and modification. JAGAL builds upon the Java library TOVAL (located at http://sourceforge.net/p/toval). To use JAGAL, make sure the TOVAL library is on the build path. This library uses and encloses jGraphX (https://github.com/jgraph/jgraphx). A documentation for JAGAL can be found under http://doku.telematik.uni-freiburg.de/jagal. -
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HHS Digital Media API Platform
Syndicate text and multimedia content with this API and storefront.
...The Centers for Disease Control and Prevention (CDC) and the Department of Health and Human Services (HHS) Assistant Secretary for Public Affairs office (ASPA) developed these APIs in collaboration with the Food and Drug Administration’s (FDA) Center for Tobacco Products (CTP). The CDC, FDA/CTP, HHS/ASPA, and the National Institute of Health’s National Institute for Allergy and Infectious Diseases (NIH/NIAID) use these platforms. https://syndication.hhs.gov http://tools.cdc.gov http://tools.niaid.nih.gov http://tools.fda.gov -
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Biogenesis X Mod
Mod of the evolution simulation and artificial life program Biogenesis
...Biogenesis discussion forum: https://sourceforge.net/p/biogenesis/discussion/ -
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Chordalysis
Log-linear analysis (data modelling) for high-dimensional data
...Chordalysis makes it possible to discover the structure of datasets with thousands of variables on a standard desktop computer. Associated papers at ICDM 2013, ICDM 2014 and SDM 2015 can be found at http://www.francois-petitjean.com/Research/ YourKit is supporting Chordalysis open source project with its full-featured Java Profiler. YourKit is the creator of innovative and intelligent tools for profiling Java and .NET applications. http://www.yourkit.com -
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SoNIA (Social Network Image Animator)
Social Network Image Animator creates animations of network data
SoNIA (Social Network Image Animator) is a Java-based package for visualizing dynamic or longitudinal network data and rendering it out as animations. The home page with examples is located at http://sonia.stanford.edu Documentation is at https://sourceforge.net/p/sonia/wiki/Main_Page/ -
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TUIT
Taxonomic Unit Identification Tool
For the installation instructions please see Wiki page: https://sourceforge.net/p/tuit/wiki/ IMPORTANT: since version 1.0.4.0 TUIT allows to select RDP-like formatted output to improve out of the box compatability with tools, that assume RDP-formatted input. A new field has been added to the properties.xml, please make sure to update it to contain <OutputFormat format="tuit"/> or <OutputFormat format="rdp"/> in the <BLASTNParameters> section. -
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Mechaglot, Calculate Semantic Similarity
Calculate semantic similarity for any human and human-like languages
...The goal of this project is simple: Input two sentences of the same language, and obtain the number (from 0 to 1) denoting the similarity between the inputted sentences, according to semantic categories. This project models my previous project: https://sourceforge.net/projects/semantics/ Difference is, this project does not use any database and computes any Strings as an input. JAVA was the language of choice, due to availability of modelling tools. This work is licensed under the Creative Commons Attribution-ShareAlike 4.0 International License. To view a copy of this license, visit http://creativecommons.org/licenses/by-sa/4.0/. ... -
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picard
A set of tools for working with high-throughput sequencing data
A set of tools (in Java) for working with next generation sequencing data in the SAM/BAM format. Note that development has moved to GitHub at https://github.com/broadinstitute/picard and support is available on the GATK forum at http://gatkforums.broadinstitute.org/categories/ask-the-team
