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Cloud-based help desk software with ServoDesk
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This project provides a set of libraries written in Java to easily manipulate Multi-Criteria Decision Aid (MCDA) concepts, especially related to outranking methods, and XMCDA files.
A very simple tool to automate benchmarking tests on MySQL DBs.
It fills MySQL tables columns;
perform customized tests; and
outputs the results on CSV format.
It uses Xeger, a java package for generating random text from regular expressions (http://code.google.com/p/xeger/).
Xeger uses dk.brics.automaton java package developed by Anders Møller (http://cs.au.dk/~amoeller/automaton/index.html).
Evoker is a graphical tool for plotting genotype intensity data in order to assess quality of genotype calls. It implements a compact, binary format which allows rapid access to data, even with hundreds of thousands of observations.
PLEASE NOTE: This source repository is no longer active. See the github link above for the latest version.
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***** Discontinued (may still work but will not be updated and supported anymore) *****
This extension connects the simulation platform NetLogo with the statistical analysis software R via Rserve. It adds some new primitives to NetLogo, which offers the interchange of data with R and the call of R functions from NetLogo. See the documentation for more details.
There is a similar extension, which use a direct connection to R via rJava/JRI, see http://r-ext.sourceforge.net. This extension is a little bit more complicated to set up but offers some more functionalities (e.g. interactive shell, more plotting functionalities).
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Please have also a look on our info page about other NetLogo extensions at http://www.uni-goettingen.de/en/315075.html.
Integrated Multiprogram Platform for Analyses in ConTest
Graphical User Interface for a software used to assess adaptive evolution in protein-coding genes. Makes use of several known bioinformatics software. IMPACT is free software, targeted to the scientific community.
Maldonado E, Dutheil JY, da Fonseca RR, Vasconcelos V, Antunes A (2011)
IMPACT: Integrated Multiprogram Platform for Analyses in ConTest.
Journal of Heredity, 102 (3): 366-369.
doi: https://doi.org/10.1093/jhered/esr003
OSM XML to CSV conversion. POI only, polygons (and polylines, but not recommended) are approximated by centroid. Result is a 3-column table with lon, lat and value (for a particular key to be chosen beforehand).
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CNV Workshop is a web-enabled platform for analyzing genome variation such as copy number variation (CNV). Learn about CNV Workshop in our associated BMC Bioinformatics manuscript: http://www.biomedcentral.com/1471-2105/11/74
The purpose of this program is to plot the waveforms of the hydrogen wave function. The program has 4 option's. First, plotting the radial function, second, plotting the radial probability, third, 2d wave function,last, 3d wave function.
netcdf-tools is a set of tools for creating netCDF files. It supports command line use on both Windows and Unix as well as use directly as a Java library. Written by CSIRO Australia and funded by the ANDS Australian Research Data Commons Project
Avenzoar is a one-year exploration of renal cell carcinoma morphology and its related single nucleotide polymorphisms (SNPa) as a method of automating diagnosis of cancer by using a computer-aided decision tree controlled by analytical statistics.
The Time Series Toolbox is a set of software components that simplify the task of building applications that record, process, store and publish time series of observations. Current main application area are sensor networks.
Franklin Math is an open source Java symbolic computer algebra system (CAS), with similarities to commercial math packages such as MATLAB or Mathematica. It allows numeric and symbolic calculations, with built-in functions including plotting commands.
EDI-Knight is an integration and translation software focussing EDI (Electronic Data Interchange), CSV (Character Separated Values), and XML. There's a command line tool for batch processing as well as a Java/J2EE conformant API.
A real-time graph plotter. While your application is computing and logging results to a CSV file using the LiveGraph Writer API, the plotter lets you visualise and monitor the results live - by instantly plotting charts and graphs of the data.
JGP is a GUI for gnuplot (http://www.gnuplot.info/).
It is made for all those who just love gnuplot but who found
that organizing a large number of datasets and plots from the command line is inconvenient.
JGP uses gnuplot as plotting engine.
MobileMath is a software written by using J2ME technolology. It turns mobile into calculator supporting many operations such as : evaluate expression, plotting, differentiate & integrate expression... It can run on any mobiles supporting Java.
HyperSpider (Java app) collects the link structure of a website. Data import/export from/to database and CSV-files. Export to Graphviz DOT, Resource Description Framework (RDF/DC), XML Topic Maps (XTM), Prolog, HTML. Visualization as hierarchy and map.