Showing 395 open source projects for "java rad framework"

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  • 1
    Java Neural Network Framework Neuroph
    Neuroph is lightweight Java Neural Network Framework which can be used to develop common neural network architectures. Small number of basic classes which correspond to basic NN concepts, and GUI editor makes it easy to learn and use.
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    Downloads: 26 This Week
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  • 2
    DESMO-J is a framework for rapidly building discrete event driven simulation models in Java, which is not restrained to any particular domain of application. It supports both event-oriented and process-oriented modelling views. See http://desmoj.de.
    Downloads: 2 This Week
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  • 3
    panFMP
    panFMP is a generic framework suitable for harvested XML metadata that is searchable through Apache Lucene without any additional RDBMS. Fields can be defined by XPath allowing for full text queries on all types of fields including numerical ranges. The code was moved to Github: https://github.com/pangaea-data-publisher/panfmp
    Downloads: 0 This Week
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  • 4
    Alevin2

    Alevin2

    Tool for the evaluation of ALgorithms for Embedding VIrtual Networks

    ALgorithms for Embedding VIrtual Networks Software to evaluate Virtual Network Embedding Algorithms.
    Downloads: 0 This Week
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    TEESer

    Tool for Engineering Emergent Selforganizing bEhavioR

    Teeser is a java-based integration framework for engineering emergent self-organizing behavior in distributed systems. It contains tools for analysis, tuning, macroscopic probing and simulations of distributed systems. Library of tools can be extended and everybody is encouraged to provide and share its tools with the community. The main idea is to provide application designers ability to seamlessly use tools which are helpful to design self-organizing behavior.
    Downloads: 0 This Week
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  • 6

    MarDRe

    MapReduce-based tool to remove duplicate DNA reads

    ...Instead, MarDRe takes advantage of the MapReduce programming model to significantly improve ParDRe performance on distributed systems, especially on cloud-based infrastructures. Written in pure Java to maximize cross-platform compatibility, MarDRe is built upon the open-source Apache Hadoop project, the most popular distributed computing framework for Big Data processing.
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  • 7

    HSRA

    Hadoop spliced read aligner for RNA-seq data

    HSRA is a MapReduce-based parallel tool for mapping reads from RNA sequencing (RNA-seq) experiments. RNA-seq analyses typically begin by mapping reads to a reference genome in order to determine the location from which the reads were originated, which is a very time-consuming step. This tool allows bioinformatics researchers to efficiently distribute their mapping tasks over the nodes of a cluster by combining a fast multithreaded spliced aligner (HISAT2) with Apache Hadoop, which is a...
    Downloads: 0 This Week
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  • 8
    FlexibleParser_Java

    FlexibleParser_Java

    Group of multi-purpose Java-converted-from-C# parsing libraries.

    FlexibleParser (Java) is currently formed by the following independent libraries/parts: - UnitParser. It allows to easily deal with a wide variety of situations involving units of measurement. - NumberParser. It provides a common framework for all the .NET numeric types. AUTHORSHIP & COPYRIGHT I, Alvaro Carballo Garcia (varocarbas), am the sole author of each single bit of this code.
    Downloads: 0 This Week
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  • 9
    ILA - teachable voice assistant

    ILA - teachable voice assistant

    ILA is a fully customizable and teachable voice assistant for Java

    ...The goal is to make ILA completely free of Google by improving all aspects of the open source systems. Since version 3.3 users can also write own add-ons to extend ILA. ILA's successor is the SEPIA Framework: https://sepia-framework.github.io/ Hope you enjoy ILA - Florian
    Downloads: 3 This Week
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  • 10
    Numerics for Chemical Engineering

    Numerics for Chemical Engineering

    Numerical models for chemical and process engineering

    NCE Calculation Framework is a library of routines, models and data applicable to chemical and process engineering calculations, written in Java. -- NEW -- www.chesolver.com *ONLINE CALCULATORS*. A set of solvers to perform calculations consistently on any device, from smart-phone to desktop. The project includes the following ready to use software all based on the same core library: * Online Calculators at www.chesolver.com * Extensions for Libreoffice/Openoffice Calc spreadsheet: - NCE: https://extensions.libreoffice.org/extensions/nce - NCE-Units: https://extensions.libreoffice.org/extensions/nce-units Check out also our video channel: https://www.youtube.com/channel/UCt2EGdw33k2u19PnZAi8YJA
    Downloads: 3 This Week
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  • 11
    As of 2018-06-28, this project has moved to https://github.com/AdamaJava. This copy of the code will remain but all new code updates and releases will be from the new site. Java code developed by the Australian ICGC team for operating on next-generation sequencing data. This code is currently being maintained and expanded by the QIMR Berghofer Genome Informatics team (http://www.qimrberghofer.edu.au/lab/genome-informatics/) More details and documentation can be found on the...
    Downloads: 5 This Week
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  • 12
    A shell for using the methods of Contextual Logic to do qualitative data analysis, mathematical research on the theory underlying Conceptual Knowledge Processing, or learning Formal Concept Analysis. It uses the framework provided by the Tockit project..
    Downloads: 0 This Week
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  • 13
    Niche Analyst (NicheA) was developed based on the BAM framework which allows users to create virtual spaces and virtual species, and to analyze ecological niches in both multivariate environmental and geographic spaces, linking views of the niche in the two spaces. The unique functionality in NicheA, not available in other software programs, is estimating Grinnellian niches of species based on environmental variables and occurrence records, but with a clear focus on fundamental ecological...
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    Downloads: 24 This Week
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  • 14

    BisSNP

    Bisulfite-seq/NOMe-seq SNPs & cytosine methylation caller

    Now in Github: https://github.com/dnaase/Bis-tools/tree/master/Bis-SNP BisSNP is a package based on the Genome Analysis Toolkit (GATK) map-reduce framework for genotyping in bisulfite treated massively parallel sequencing (Bisulfite-seq, NOMe-seq and RRBS) on Illumina platform. It uses bayesian inference with either manually specified or automatically estimated methylation probabilities of different cytosine context(not only CpG, CHH, CHG in Bisulfite-seq, but also GCH et.al. in other...
    Downloads: 1 This Week
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  • 15
    KalypsoBASE
    KalypsoBASE is a Desktop-GIS built on Eclipse. It's focus lies on modelling gis data using GML Application-Schemata. Features contain generic dialogs based on GML, maps based on OGC's SLD, and other tools like a charting framework or API for timeseries
    Downloads: 0 This Week
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  • 16
    PLEASE NOTE THAT THIS PROJECT HAS FINISHED. THE FILES ARE HERE AS AN ARCHIVE. MDV: XML data management and presentation framework. For download and instructions please go to mdv.sourceforge.net.
    Downloads: 0 This Week
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  • 17
    CoSMoSim

    CoSMoSim

    Visual & persistent families of models for CA, DEVS, and Statecharts

    CoSMoSim offers an integrated framework for model development, simulation, & experimentation. Its unified logical, visual, and persistence framework supports specifying families of parallel CA, DEVS, Statecharts, and XML-Schema models (see DEVS-Suite simulator).
    Downloads: 3 This Week
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  • 18
    FUMOLA - Functional Mock-up Laboratory

    FUMOLA - Functional Mock-up Laboratory

    An FMI-based co-simulation framework.

    FUMOLA is a co-simulation framework specifically designed to support the features offered by the FMI specification. It provides a flexible platform that allows to configure and execute co-simulation setups in an easy way. FUMOLA is developed on top of the Ptolemy II framework (https://ptolemy.eecs.berkeley.edu) and the FMI++ library (http://fmipp.sourceforge.net). The online documentation of FUMOLA is available here: https://sourceforge.net/p/fumola/wiki/Home/
    Downloads: 0 This Week
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  • 19
    Orkney

    Orkney

    Orkney Testframework

    Orkney is a small but powerful test framework for Java. Orkney executes tests that are structured into test groups, test cases and test steps. Test steps are used like bricks to create test cases while test groups collect test cases and other test groups to create a test suite. Test cases are written in a simple text language thus allowing composition of cases from test steps without deep programming knowledge.
    Downloads: 0 This Week
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  • 20
    A spring-based 3D graph layout tool written in Java. Rendering is performed in OpenGL via the JOGL library.
    Downloads: 0 This Week
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  • 21
    freedomotic

    freedomotic

    Open IoT Framework

    Freedomotic is an open source, flexible, secure Internet of Things (IoT) development framework, useful to build and manage modern smart spaces. It is targeted to private individuals (home automation) as well as business users (smart retail environments, ambient aware marketing, monitoring and analytics, etc). Freedomotic can interact with well known standard building automation protocols as well as with "do it yourself" solutions. It treats the web, social networks and branded frontends as...
    Downloads: 2 This Week
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  • 22
    jalicanto

    jalicanto

    Traveling Salesman Problem "window time based" aproximate solver

    Time based Traveling salesman problem solver. Using iterated local search algorithm, implements xkick perturbation Programmed in Java. A class to use the TSP Suite(Thomas Weise, Raymond Chiong, J ¨org L¨assig, Ke Tang, Shigeyoshi Tsutsui, Wenxiang Chen, Zbigniew Michalewicz, Xin Yao, Benchmarking Optimization Algorithms: An Open Source Framework for the Traveling Salesman Problem. 2014.),is implemented.
    Downloads: 0 This Week
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  • 23
    Welsh Natural Language Toolkit
    ...The WNLT project delivers four core NLP modules; a) Word Segmentation for separating text into words b) Sentence Boundary Disambiguation for finding sentence boundaries c) Part of Speech Tagger for determining the part of speech of each word d) Morphological Analyser for identifying the root form (lemma) of words. The modules are written in JAVA and ‘wrapped’ for execution under the General Architecture for Text Engineering (GATE) framework. The project also includes CYMRIE an adapted version for Welsh of the GATE - ANNIE Named Entity Recognition (NER) application for a range of entities such as Persons, Organisations, Locations, and date and time expressions. Version 2.x The CYMRIE pipeline is accessible via a API, standalone GUI and CLI. ...
    Downloads: 0 This Week
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  • 24
    CalclipseMath

    CalclipseMath

    Java math expression parser and script interpreter

    ...CalM includes a script interpreter which is based on the math parser. The CalM scripting language lets you define your own functions and variables. These may be exported and used in other scripts. The scripting framework supports a component type called MComp (Math Component). MComps are implemented as Java classes and allow further extension to the scripting language. Please visit www.calclipse.com for more information about CalclipseMath and other Calclipse products.
    Downloads: 0 This Week
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  • 25
    GeoWE

    GeoWE

    GeoData Web Editing [core SIG Web]

    ...The main aim of this initiative is to move the strenghts usually linked to desktop GIS to a web environment, by leveraging open source technologies. This is a free software project that is part of the open source GIS world, and it is developed in Java using the Google Web Toolkit framework. The geowe-core is being developed using the following technologies: - GWT (Google Web Toolkit) - JBoss ERRAI Framework - Sencha GXT - GWT-OpenLayers
    Downloads: 0 This Week
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