26 projects for "run time java" with 2 filters applied:

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  • 1

    BBMap

    BBMap short read aligner, and other bioinformatic tools.

    This package includes BBMap, a short read aligner, as well as various other bioinformatic tools. It is written in pure Java, can run on any platform, and has no dependencies other than Java being installed (compiled for Java 6 and higher). All tools are efficient and multithreaded. BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and tolerant of errors and numerous large indels. ...
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    Downloads: 1,791 This Week
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  • 2
    Foreval

    Foreval

    Foreval is parser , compiler , evaluator of mathematical expressions

    Foreval is compiler of mathematical expressions (formulas) (directly to x86-32 CPU/FPU/SSE instructions) given as string at run-time. Present as "dll" library and Delphi sources. Can be compiled in FPC (Lazarus). Can be direct connection to the program (without dll). Сurrent version ( v. 9.1.1.395B): Examples for Delphi, Lazarus , GCC (Codeblock), MSVC. Demo: Fractals Julia; Visualizing of functions of complex variable - complex domain coloring , graph plotting & finding roots F(x), Fourier series. ...
    Downloads: 1 This Week
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  • 3
    Units of measurement for Ada

    Units of measurement for Ada

    Handling dimensioned values in Ada

    The library provides an implementation of dimensioned values for Ada. Unit checks are made at run-time, if not optimized out by the compiler. SI and irregular measurement units are supported. Shifted units like degrees Celsius are supported too. Conversions from and back to strings are provided for all various irregular units. An extensive set of GTK widgets for dealing with dimensioned values is included, though use of GTK is not mandatory for the rest of the library.
    Downloads: 1 This Week
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  • 4
    OSHMI - Open Substation HMI

    OSHMI - Open Substation HMI

    SCADA HMI for substations, IoT and automation applications

    Now with IEC61850 support! This project combines existing open source projects and tools to create a very capable, mobile and cloud-friendly HMI system that can rival proprietary software. This approach makes it possible to join forces of each project (Chromium, SVG/HTML5, PHP, Lua, SQLite, Inkscape, Lib61850, OpenDNP3, Nginx, Vega, PostgreSQL, Grafana,…) to achieve a great set of open, evergreen, modular and customizable tools for building great HMIs for automation projects. This is not...
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    Downloads: 19 This Week
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  • 5
    forevalz

    forevalz

    ForevalZ - compiler of mathematical expressions with complex numbers

    ForevalZ - compiler of mathematical expressions(formulas) with support of complex numbers (directly to CPU/FPU x86-32 comand) given as string at 'run-time'. (dll library and delphi component). Can be compiled in FPC (Lazarus). Examples for Delphi (2009), FPC , C++(Builder(2009), MSVC(2010), GCC (Codeblock)), VB.NET, VB6, FreeBasic. Demo: Fractals Julia; Visualizing of functions of complex variable - complex domain coloring . (math parser, math expression parser, evaluate formula, evaluator, calculate) (v.1.3.5.231) The project IS CLOSED. ...
    Downloads: 0 This Week
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  • 6
    Jack LIRE (Linked Record)

    Jack LIRE (Linked Record)

    Quantum universal object system with referencing and genetics

    Jack LIRE (Linked Record) is a quantum database-backed life-long text record diary with referencing (linking) between records, and a data library for life-long keeping of files such as documents, photographs, music and more. The diary records are fully searchable. Files can be mentioned in diary records to preserve memories, document knowledge and ideas, and more. Massive numbers of diary records and files can be permanently kept. A database located on one computer can be accessed from...
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  • 7
    Digital Logic Simulator (DiLoSim)

    Digital Logic Simulator (DiLoSim)

    Allows you to build your own circuits and test them

    With this software you will be able to build your own circuits and test them. You are allowed to use this easy-to-use tool for educational reasons. Run on Windows: - Install Java: https://java.com/en/download/ - Download the binaries - Open the jar-file with the java runtime Limitations: - Currently only German language supported. - This software requires Java 8 or above to work. Tested with OpenJDK & Oracle Java. For more information check out the project's source code at https://github.com/Crusader99/digital-logic-simulator
    Downloads: 0 This Week
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  • 8
    SoundStepper

    SoundStepper

    A software for ATM telescope automation

    SoundStepper is a "100% software" telescope controller, for Windows, using audio hardware to control step motors at real time. All it requires to operate are external step motor drives, which can be a commercial "pulse/direction" drive or analog current amplifiers. Documentation: http://soundstepper.sourceforge.net/
    Downloads: 0 This Week
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  • 9

    fast_count_multi

    Extremely fast NGS read counter

    ...Files include: fast_count_multi - reports all counts and RPKM, multithreading support fast_count_deseq - reports gene counts in deseq compatible format, multithreading support fast_count - reports all counts with no multithreading support. usage ./fast_count_multi num_threads gtf_file bam_file(s) > output Requires bamtools API library at run time, and c++0x for compile. git clone https://github.com/pezmaster31/bamtools cd bamtools mkdir build cd build cmake .. make export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:path to/lib g++ -I bamtools/include/ -L bamtools/lib/ -o fast_count_multi fast_count_multi.cpp -lz -lbamtools -fpermissive -pthread -std=c++0x
    Downloads: 0 This Week
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  • 10

    Ctrl_GraphWindow

    C# fully live user configurable chart control

    Chart display control featuring various graphical exploitation options (zooms, cursor, statistics) fully configurable by the application end user run time Your feedback values for us, so add a review!
    Downloads: 0 This Week
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  • 11
    CommandCentre

    CommandCentre

    Command Centre

    ...Minor setup- and make reconfiguration bugs, no changes planned. The Command Centre is a Simulation Programming Framework for advanced Command and Control Simulators on Linux/Windows using C/C++ and Java. The Framework integrates with Leading Tools like Visual Paradigm (UML), Net Beans 7.0 (Java), and Code Warrior (C/C++). The codebase supports building Heterogenous Command and Control Consoles and Accelerated User Attached Audiovisuals. The Command Centre Real Time Simulation Framework (under RT Linux) allows designers to build Fast Prototyped Consoles for advanced Simulations running on Local Area Networks.
    Downloads: 0 This Week
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  • 12
    miRNA Temporal Analyzer (mirnaTA)

    miRNA Temporal Analyzer (mirnaTA)

    Differential expression analysis tool for miRNAs in temporal studies

    The microRNA Temporal Analyzer (mirnaTA) is a bioinformatics tool which can be used to identify differentially expressed miRNAs in temporal studies. It is implemented in Perl and R package (>= 2.13.0) and can be run across multiple platforms such as Linux, Mac and Windows. The mirnaTA requires that users provide data from a minimum of two time points and analyze up to 20 time points. To normalize data and remove technical variability, Normal Quantile Transformation (NQT) was used, and the normalized data is analyzed using linear regression model to locate any miRNAs which are differentially expressed in a linear manner. ...
    Downloads: 0 This Week
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  • 13
    GoIFISH

    GoIFISH

    for the semi-automated analysis of IFISH images

    GoIFISH has been developed for the analysis of IFISH (Immunofluorescence + Fluorescence in situ Hybridisation) images, performing nuclear, membrane and spot detection. Users can manually edit segmentation results, perform background adjustments, construct heatmaps, topology maps, and perform cell classification. All results can be exported for further analysis. GoIFISH has been developed in MATLAB, however binaries are provided to run the program outside of the MATLAB environment....
    Downloads: 0 This Week
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  • 14
    XNBC: neurobiology simulation tool

    XNBC: neurobiology simulation tool

    XNBC is a graphic application to simulate biologic neural networks.

    XNBC is a full featured application for computer naive neuroscientists. It simulates biological neural networks using graphic tools to edit neurons and networks, to run the simulation and to analyze results. Written in C, it runs on Unix and Windows. Web site : http://ticemed-sa.upmc.fr/xnbc/ All recent versions are on this site.
    Downloads: 2 This Week
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  • 15
    Impact Finite Element Program
    Impact is an explicit Finite Element Program Suite which simulates dynamic impact events. It has a range of elements, contact handling and different material laws. Models can be created, solved and analyzed with the included pre- and postprocessor. Impact is based on an Explicit Time stepping algorithm. These kind of codes are used to simulate dynamic phenomena such as car crashes and similar, usually involving large deformations.
    Downloads: 4 This Week
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  • 16

    FlyDataAnalyzer

    Software Tool for Processing and Analysis of Propagating Channel Measu

    Software Tool for Processing and Analysis of Propagating Channel Measurements. Fly Data Analyzer is the university project (CTU in Prague). It is used in research measurements for input data validation and time synchronization. Test data you can find in download section.
    Downloads: 0 This Week
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  • 17
    Seqshell

    Seqshell

    A JAVA GUI for performing the function of Tophat and Cuffdiff

    Combines the Tophat and Cuffdiff functions in one GUI interface. tophat and cuffdiff are required to be pre-installed in the system. By modifying the program, it can be used to execute any command line programs even R packages since R can also be run from commandlines. New functions: Batch processing function for Tophat. You can now execute as many mapping jobs as you want with tophat. This program will save the output into separate folders. An alert email will be sent to your email address when the job is done. (You will need to modify the source code to change the content to meet your special needs) Run-time information will be displayed in a JAVA output window.
    Downloads: 0 This Week
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  • 18
    QMC Logic Minimizer

    QMC Logic Minimizer

    combinational logic functions minimization

    QMC Logic Minimizer is a versatile application for fast simplifying truth and reduce lines tables. This program offers a comfortable user interface for generating and minimizing of the combinational logic functions. It is unique for its possibility of minimizing several functions at the same time. This program is intended for practical digital devices constructors as well as formal scholars and academics. Features: - You can minimize up to 16 input variables and up to 16 output...
    Downloads: 1 This Week
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  • 19
    ipmems

    ipmems

    Real-time data acquisition and visualization software

    Cross-platform data acquisition and visualization software with an embedded HTTP-server, binary protocol parsing library, protocol emulation server, remote secure administration server, embedded Groovy scripting facilities and HMI (SCADA) visualization module.
    Downloads: 0 This Week
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  • 20
    Smart Calculator is beautifully designed, having both standard and scientific modes of calculations. It is built to run anywhere, as its written completely in Java. It featured different types of Look and Feels, using Java's Swing PLAF library.
    Downloads: 0 This Week
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  • 21
    BeamFlow

    BeamFlow

    A electric, magnetic, and gravity field physics presentation program

    BeamFlow is a scientific presentation and demonstration program for typical introductory physics problems involving electric, magnetic, and gravity fields in three dimensions. Real-time demonstration of the magnetic field around a wire, the gravity fields around rotating binary stars, and the electric field from multiple point charges are just some of the potential applications.
    Downloads: 0 This Week
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  • 22
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  • 23
    Ex-Crawler
    Ex-Crawler is divided into 3 subprojects (Crawler Daemon, distributed gui Client, (web) search engine) which together provide a flexible and powerful search engine supporting distributed computing. More informations: http://ex-crawler.sourceforge.net
    Downloads: 0 This Week
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  • 24
    A tool for people interested in Special Relativity. Can introduce you to some basics, as the transformations and the 4-vectors. Examples, illustrations and some exercises will be included. With some time, effort, and space on the desk, you can master it.
    Downloads: 0 This Week
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  • 25
    JOrrery simulates the motion of planets moving under gravity. It comes with a number of initial "scenarios" you can run, such as "The solar system", "Earth & Moon" etc. You can also add more planets during a simulation.
    Downloads: 0 This Week
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