Search Results for ".java" - Page 27
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2661 projects for ".java" with 2 filters applied:
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A desktop calculator/scientific calculator. Use as desktop/graphical calculator, web applet, or to show calculator operations: arithmetic, trigonometry, logarithms, complex numbers, memory, statistics. Features four bases, copy and paste, and history
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iPiG
Integrating PSMs into Genome browser visualisations
iPiG targets the integration of peptide spectrum matches (PSMs) from mass spectrometry (MS) peptide identifications into genomic visualisations provided by genome browser such as the UCSC genome browser (http://genome.ucsc.edu/). iPiG takes PSMs from the MS standard format mzIdentML (*.mzid) or in text format and provides results in genome track formats (BED and GFF3 files), which can be easily imported into genome browsers. For more details about iPiG and it's functionallity, please... -
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An integrated bioinformatics toolkit for analysis of ChIPseq data from the Illumina DNA sequencing platform. Includes filtering, quality control, simulation, peakfinding, visualization, and comparison of samples.
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JBoost is a simple, robust system for classification. JBoost contains implementations of several boosting algorithms in an alternating decision tree framework. In addition, JBoost provides extensible software for adding more learning algorithms.
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Build Agents and Models on One PlatformGemini Enterprise Agent Platform is Google Cloud's comprehensive platform for developers to build, scale, govern, and optimize agents and models. Choose from Google's most advanced models and third-party models like Anthropic's Claude Model Family.
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EvoPromoter is a JAVA application that detects promoter regions in aligned nucleotide sequences using phylogenetic hidden markov models.
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This project provides a set of libraries written in Java to easily manipulate Multi-Criteria Decision Aid (MCDA) concepts, especially related to outranking methods, and XMCDA files.
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YANG (Yet Another Network Generator - Java) enables you to generate social networks given various social rules observed in the real population. Uses: generate realistic networks to be used in individual-centric models, teaching or benchmarking.
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PetriNetExec: Java Embeddable Petri Nets
PetriNetExec a library for embedding Petri Nets into Java applications
Briefly said, PetriNetExec is an open-source Java library which allows you to embed Petri Nets into your Java application. Using PetriNetExec you can define places and transitions, connect them using arcs and inhibitors, define the initial marking and then fire events and see how tokens flow into the network. * PetriNetExec does not provide a GUI for editing the network nor will it provide in the near future. -
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JAVA Arabic Stemmer
A JAVA class with a small functionality that is stemming Arabic words
A JAVA Arabic stemmer that is based on Shereen Khoja algorithm. This java class offers a function called stemWrod which takes an arabic word and return the stem of it. -
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jLab est une plate-forme scientifique destinée à être l'outil de travail privilégié des étudiants, enseignants, ingénieurs, scientifiques et chercheurs. jLab est totalement modulaire et facilement extensible via un système de modules
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vtSim
vtSim is a traffic data and simulation management environment
vtSim is a traffic data, simulation and results management environment. It has been created by the Chair for Traffic Engineering and Control, Technische Universität München (http://www.vt.bv.tum.de/). -
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Spantus - signal(speech) analytical tool
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Cherokee is a fully extensible and scriptable automation engine for any and all java applets. To make it work for your favorite java applet the most you have to do is write is two classes.
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JFlightPlanner
Flight Planning tool.
Flight planning tool, designed for General Aviation pilots. Includes Aviation Weather Center METAR and TAFs queries. -
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nebular
Pure Java Fuzzy API
Nebular is a fuzzy logic API written in Java. It is written in pure Java and comprehends fuzzy logic, fuzzy sets and operations, fuzzy control, decision support, type 2 fuzzy logic and type 2 fuzzy intervals. -
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The Blast2SNP is able to pick out synonymous, non-synonymous mutations and indels from draft assembly sequences by performing BLAST search against the reference ORF sequences.
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Galois sub-hierarchy builder
Visualize Galois sub-hierarchy of 2d matrix
GSH builder is a free Galois Sub-Hierarchy visualization tool. The algorithm for calculating GSH is called Pluton and the present Java realization is based on two articles. "Efficiently computing a linear extension of the sub-hierarchy of a Concept Lattice" by Anne Berry, Marianne Huchard, Ross M. McConnell, Alain Sigayret and Jeremy P. Spinrad. "Performances of Galois Sub-hierarchy-building algorithms" by Gabriela Arevalo, Anne Berry, Marianne Huchard, Guillaume Perrot and Alain Sigayret In you're in need of other GSH algorithms or their realizations in C++, you might want to investigate a project called Galicia on sourceforge. ... -
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OmniHelp is a cross-platform, browser-independent, tri-pane help viewer built in pure JavaScript and CSS with HTML 4. Some functions (such as help embedding) may in the future be in Java, C, or C++; CSH is fully supported. All code is under the LGPL.
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Pontos
Pontos calculates distance matrices from DNA sequence alignments.
...R would be 0.5 different from A or G); - ignore ambiguities in each pairwise comparison; - remove all columns, globally, that show any ambiguity. Pontos was written in Linux, but should run in any system where Java works. Pontos is licensed under the GPL version 3. -
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The Harmony of the World
A fair attempt at the Keplerian tradition to explore the solar system
...Apparently his observance of a harmonic law of planetary motion was reason for him to propose a computable system of pitch and harmony deriving from angular velocity. The purpose of the programming project is as a tool to examine his system. With Java 2, it provides an open-source solution for listening to harmonies so generated by planetary motion. This program can run on any computer provided with a Java Virtual Machine (Rev 1.5 or greater). JAVA 2, system independent. Purpose:to encourage research in harmony in astronomy, math and music. Obstacles:math, DSP/synthesis, networks, astronomy. ... -
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PTools is a set of useful tools written in Pascal. It includes: scientific calculator, archiver, text editor, remote adminitration and more. It is designed to be portable across operating systems, specially Java-based mobiles, Windows and Unixes.
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Bracer
Repository has been moved to: http://dtitov.github.com/bracer
Java library for parsing and evaluating math expressions. Javadoc is available at http://bracer.sourceforge.net/javadoc/ P.S. This library depends on Apache Commons Math, so don't forget to include commons-math-2.2.jar to your project. -
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CRF is a Java implementation of Conditional Random Fields, an algorithm for learning from labeled sequences of examples. It also includes an implementation of Maximum Entropy learning.
