Showing 14 open source projects for "linux nvidia"

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  • 1
    oxDNA

    oxDNA

    A code primarily aimed at DNA and RNA coarse-grained simulations

    The oxDNA code has been moved to https://github.com/lorenzo-rovigatti/oxDNA, please go there for new releases.
    Downloads: 13 This Week
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  • 2

    ExCon Imager

    Gigapixel GPU accelerated radio interferometric imager

    ExCon can create images with a very wide field of view (more than billion pixels). It implements novel gridding and image weighting algorithms. It is well suited to make ultra deep radio interferometric images, minimizing aliasing artefacts and PSF variation. NVIDIA GPU acceleration is available. JAVA/SCALA support available.
    Downloads: 0 This Week
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  • 3
    BarraCUDA Fast Short Read Aligner
    Barracuda is a high-speed sequence aligner based on Sanger's BWA and utilizes the latest Nvidia CUDA architecture for accelerating alignments of sequence reads generated by next-generation sequencers.
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    Downloads: 12 This Week
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  • 4
    3DimViewer

    3DimViewer

    3DimViewer is a lightweight 3D viewer of medical DICOM datasets.

    3DimViewer is a lightweight 3D viewer of medical DICOM datasets that is distributed as open source software. The viewer is multiplatform software written in C++ that runs on Windows, Mac OS X and Linux systems. 3DimViewer source codes are available on Bitbucket (https://bitbucket.org/3dimlab/3dimviewer). Video tutorials can be found on YouTube (https://www.youtube.com/playlist?list=PLCvwUmKRw9ZO4YexLKEXmw_2jPo-kXVRn).
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    Downloads: 94 This Week
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  • 5

    Accelerated Feature Extraction Tool

    A fast GPU accelerated feature extraction software for speech analysis

    A fast feature extraction software tool for speech analysis and processing. It incorporates standard MFCC, PLP, and TRAPS features. The tool is a specially designed to process very large audio data sets. It uses GPU acceleration if compatible GPU available (CUDA as weel as OpenCL, NVIDIA, AMD, and Intel GPUs are supported). CPU SSE intrinsic instruction set is used in cases where no compatible GPU present. The output files are stored in HTK format. The software is developed at Department of...
    Downloads: 0 This Week
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  • 6
    MXLib is a C++ wrapper around the Intel® Integrated Performance Primitives (IPP) library and NVidia NPP CUDA library. You can use either IPP code (or a subset of functions that do not require IPP) on the CPU side, or use NPP/CUDA on the GPU side, or use both together. The function syntax is similar to that found in MatLab and the library is designed to make it easy to port your code from MatLab to C++. The idea is to provide Scientists, Engineers, Researchers and other non full-time...
    Downloads: 0 This Week
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  • 7

    FamSeq

    Variant calling on the basis of pedigree information

    It is still challenging to call rare variants. In family-based sequencing studies, information from all family members should be utilized to more accurately identify new germline mutations. FamSeq serves this purpose by providing the probability of an individual carrying a variant given his/her entire family’s raw measurements. FamSeq accommodates de novo mutations and can perform variant calling at chromosome X. To accommodate variations in data complexity, FamSeq consists of three...
    Downloads: 2 This Week
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  • 8
    GeNN
    ==================================== ***** ATTENTION!!! WE HAVE MOVED!!! ***** You will find all future GeNN updates on GitHub at: https://github.com/genn-team/genn THIS PAGE WILL NO LONGER BE MAINTAINED! ==================================== GeNN is a GPU enhanced Neuronal Network simulation environment based on code generation for NVidia CUDA.
    Downloads: 0 This Week
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  • 9
    Point Cloud Library

    Point Cloud Library

    Standalone, large scale, open project for 3D point cloud processing.

    The Point Cloud Library (PCL) is a standalone, large scale, open project for 2D/3D image and point cloud processing. PCL is released under the terms of the BSD license, and thus free for commercial and research use. We are financially supported by Open Perception, Willow Garage, NVIDIA, Google, Toyota, Trimble, Urban Robotics, Honda Research Institute, Sandia, Dinast, Optronic, Ocular Robotics, Velodyne, Fotonic, Leica Geosystems, and MKE. We would also like to thank individual donors and...
    Downloads: 49 This Week
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  • 10

    GPUmat

    GPUmat is a C/C++ GPU engine for Matlab based on NVIDIA CUDA.

    Please download Windows and Linux version by clicking on "Browse All Files". GPUmat allows standard MATLAB code to run on GPUs. The engine is written in C/C++ and based on NVIDIA CUDA. Please contact gpyougroup@gmail.com for any questions. Unfortunately GPUmat was compiled for CUDA 5.0 and we basically stopped any support for other CUDA version because we don't have the resources to do it.
    Downloads: 1 This Week
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  • 11
    All pairs n-body simulation of electromagnetic forces on charged particles, adapted from Nvidia SDK 3.2 sample. Uses Lorentz force from EM fields via the Biot-Savart law for moving charged particles (uses relative velocity). Relativistic.
    Downloads: 0 This Week
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  • 12
    MUMmerGPU is a high-throughput DNA sequence alignment program that runs on nVidia G80-class GPUs. It aligns sequences in parallel on the video card to accelerate the widely used serial CPU program MUMmer.
    Downloads: 0 This Week
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  • 13
    Using the CUDA API this project modifies the AutoDock software to run in parallel on NVIDIA GPUs. Users will be able to download and compile the code and use AutoDock on CUDA capable Graphics Cards. Autodock is located at http://autodock.scripps.edu/
    Downloads: 0 This Week
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  • 14
    The Shallows library is a cross platform C++ layer on top of OpenGL 2.0 and GLSlang (and optionally Nvidia CG). It is designed to ease the task of writing GPGPU applications. Much emphasis is placed on error checking and validation of the OGL pipeline.
    Downloads: 0 This Week
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