Search Results for "submission"
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Showing 34 open source projects for "submission"
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PyRx - Virtual Screening Tool
Virtual Screening software for Computational Drug Discovery
PyRx is a Virtual Screening software for Computational Drug Discovery that can be used to screen libraries of compounds against potential drug targets. PyRx enables Medicinal Chemists to run Virtual Screening from any platform and helps users in every step of this process - from data preparation to job submission and analysis of the results. While it is true that there is no magic button in the drug discovery process, PyRx includes docking wizard with easy-to-use user interface which makes it a valuable tool for Computer-Aided Drug Design. PyRx also includes chemical spreadsheet-like functionality and powerful visualization engine that are essential for Rational Drug Design. ... -
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Image16
Image viewer/editor specialized in astrophotography 16bits processing
Opens/saves TIF, FITS, PNG, XISF, PXM, RAW, JPG, XCF, PSD, WEBP. AsinH, Sqrt, Ln, Exp and Sqr stretching, HSL and RGB adjusting, Levels and Curves adjusting and Background Extraction for Color Balance, Flatness and Gradient Correction. Arithmetic between images. Resizing and croping. Color Balance based on background, selection or stars B-V (after platesolving). Debayering/Bayering. Inversion, mirroring, rotation, barrel/pincushion correction. RGB alignment/shifting. Erode, Dilate, ...... -
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PCB is a tool for the layout of printed circuit boards. PCB can produce industry standard RS-274X and Excellon NC-Drill format output for submission to board manufacturers.
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Web-based software for submission and review of papers to academic conferences. Provides support for the entire life-cycle of the conference review process.
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Meraculous-2D
Eukaryotic Genome Assembler
...Features include: - Efficient k-mer counting and deBruijn graph traversal - Two modes of handling of diploid allelic variation - Improved scaffolding that produces more complete assemblies without compromising scaffolding accuracy. The assembly is driven by a perl pipeline which performs data fragmentation and load balancing, as well as submission and monitoring of multiple task arrays on a GE/SLURM-type cluster or a standalone multi-core server. Manuscripts in submission: https://arxiv.org/abs/1703.09852 https://arxiv.org/abs/1608 -
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Amazon Mobile Analytics SDK JavaScript
Amazon Mobile Analytics JavaScript SDK
The Mobile Analytics SDK for JavaScript allows JavaScript-enabled applications to create and submit events for analysis in the AWS Console and through Auto Export to S3 and Redshift. The library uses the browser's local storage API to create a local cache for the data, allowing your web application to batch and record events even when the app is offline. You can record monetization events to enable reports such as Average Revenue Per User (ARPU) and more. Additional app and environment... -
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iChair is a powerful submission/review server software designed to help the program chair of a conference with: submission collection, assignment of articles to reviewers, review collection, discussions, mailing to authors and reviewers... Release 29 of iChair transitioned from SQLite2 to SQLite3 and can now run on PHP 5.4 and higher. Upgrading from a previous release of iChair will require you to delete all databases.
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L-GRID: a Light portal to access Grid via Web. It provides the control over the complete lifecycle of a Grid Job, from its submission and status monitoring, to the output retrieval. It is client-server application. The L-GRID server is hosted on gridui.sns.it. gridui.sns.it is GRID EGI User Interface for public access which supports "dteam","gridit","infngrid","lhcb","ops","theophys" virtual organizations. if your virtual organization is not in this VOs list, please contact us to add it. === Running You should have received this application as an archive file. ...
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openSEQ
NGS compute distro proloaded with pipeline analysis software
Forked Ubuntu 14.04 minimal install with XOrg and FluxBox desktop environment for web-based pipeline construction and job submission. HOWTO: 1) Set VM network settings to a bridged adapter type. 2) Load VM to client 3) From host: $ ssh -X ubuntu@<foobar> 'firefox && butterfly.server.py --unsecure' --- passwd = 616287xx 5) or ssh into host with X forwarding, and type runme This will launch an X-session of Firefox on the client, which will then be forwarded to the host. ... -
Cut Data Warehouse Costs by 54%BigQuery delivers 54% lower TCO with exabyte scale and flexible pricing. Free migration tools handle the SQL translation automatically.
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Meet#Web is flexible module-based web-solution for organizers of all sorts of meetings from local sessions to international conferences/workshops. Available options are paper submission/review, tutorials, hotel reservation form, invoicing, visa appliance form. Main features include web interface for setup/configuration, collaboration, export, statistics, file uploads, e-mail notifications.
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Knee Laxity Ligament Contribution
Supplementary material for BIO-14-1289
This executable is supplementary material as part of the manuscript submission BIO-14-1289. -
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The Investigation/Study/Assay (ISA) Infrastructure is the first pilot-stage freely available software suite that 1. assists in the reporting and local management of experimental metadata and facilitates submission to international public repositories.
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q pipeline manager
q: integrated platform for pipeline configuration and management
...Data processing pipelines require high-level organization and parallelization of work to optimize resource utilization and decrease the time to results. q (from queue) allows complex job sequences to be efficiently assembled and managed, including dependency tracking, parallelization, and pipeline-level monitoring, error recovery, and data protection. Pipelines are constructed from modular script files, with job definitions and results stored in easily retrieved job files. A web interface facilitates job submission and monitoring, with the complete pipeline exportable for full transparency. -
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Bioinformatic tools for analyzing an orfeome using translated ORFs and compares each ORF to the provided Orfeome/Proteome. Our script uses NCBI BLAST run locally and MySQL as the main engines in a new and interisting way. It is designed specifically for Poxvirus genomes, and provides the VACV-COP nomenclature and Cowpox Ortholog groups per each ORF. The BLAST stats are generated when compared to the Proteome you provide. It can be easily adapted for other genomes.
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DOMjudge programming contest jury system
DOMjudge is an automated judge system for programming contests.
NOTE: DOMjudge has moved to www.domjudge.org and Github for all development. DOMjudge is an automated judge system to run programming contests. Both team and jury side interfaces are web based, with a command line submit tool available as well. It is written in PHP, shell-script and C/C++ and needs MySQL and a webserver. -
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ReadWrapper is a Python toolset to prepare and package raw sequencing data ("reads") for submission to the Sequence Read Archive (SRA, http://trace.ncbi.nlm.nih.gov/Traces/sra/).
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Onco-STS
A web-based Laboratory Information Management System
...The sample tracking system for oncogenomic studies (Onco-STS) is designed to store these data and make them easily accessible to the researchers who work with the samples. The system is a web application, which includes a database and a front-end web page that allows the remote access, submission and updating of the sample data in the database. -
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Timina is a Java web-based application for automation of all steps of a genome sequencing project: submission, assembly and annotation of sequences.
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wwwmap
SVG Based WWW Mapping Module Patch for WebKit
wwwmap is patch codes which adds mapping functions to webkit. This functions are based on the following member submission for W3C. (http://www.w3.org/Submission/2011/04/) -
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NMRShiftDB is an open-source, open-access, open-submission, open-content web database for chemical structures and their nuclear magnetic resonance data.
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A bioinformatics package to analyse ESTs (Expressed Sequence Tags) easily. It contains functionalities of ESTs for EST submission, Batch BLAST and BLAST result parser, etc. easiEST contains JAVA GUI applications for analysing ESTs or other sequences
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BioSunMS, a flexible software platform for submission, management, retrieval of sample and MS data(MALDI or SELDI), and clinical proteomics-related statistical analysis. BioSunMS integrated all functions into a user-friendly desktop RCP application.
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The prototype of a web-based application for the submission of content to a digital object repository according to customizable workflows. The application integrates JBoss jBPM and the Fedora repository.
