Showing 12 open source projects for "stochastic processes"

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  • 1
    Bridge.jl

    Bridge.jl

    A statistical toolbox for diffusion processes

    Statistics and stochastic calculus for Markov processes in continuous time, include univariate and multivariate stochastic processes such as stochastic differential equations or diffusions (SDE's) or Levy processes.
    Downloads: 0 This Week
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  • 2

    Zarja

    Agent-based simulation toolkit

    It is an open source scientific library that is focused on multi-agent simulations on graphs. It prepares basic toolkit for agents, models, timers, graphs, nodes and edges. It is also accompanied with tools for data processing.
    Downloads: 0 This Week
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  • 3
    STochastic Engine for Pathway Simulation
    Stochastic simulator for signaling pathways occuring in biological cells. Handles reaction-diffusion processes in 3D tetrahedral meshes. Please check our new repository: https://github.com/CNS-OIST/STEPS
    Downloads: 0 This Week
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  • 4

    Virus QSP Modeling

    C++ and Python code for simulating RNA virus replication

    Stochastic simulation model of poliovirus Sabin-to-Mahoney genetic state transition (C++ code). Models genotypes, virus populations, and quasispecies cloud. Simulates replication error and copy-choice recombination. Various parameters guiding the model are user-specified. Python code post-processes simulation output to produce report files.
    Downloads: 0 This Week
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  • 5
    SPiM2Eclipse

    SPiM2Eclipse

    Eclipse plugin for Stochastic Pi Machine

    Stochastic Pi Machine (SPiM), created by Microsoft, is a programming language for modeling biological processes. Two tools are available from Microsoft for simulation. A web application Visual SPiM, and a destkop application SPiM Player. Both simulation tools require to be run on a Windows platform. Fortunately Microsoft has also released a command line version for Linux and Mac OS based on OCAML however this version will only output a CSV file for the simulation results. ...
    Downloads: 0 This Week
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  • 6

    simbTUM

    Simulation of stochastic processes and ODE models in biology.

    SIMulation of Biological systems (developed at the TU Munich) This program allows to define ODE-models or stochastic compartemental models of biological processes, to simulate, to fit data and to do some statistics (fitting and statistics for deterministic models only).
    Downloads: 0 This Week
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  • 7
    Java library for Monte Carlo simulation, stochastic processes, finance. Classes define the basic mathematical notions to ease transition from theory to application.
    Downloads: 0 This Week
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  • 8
    T3S Tool

    T3S Tool

    Learning Stochastic Discrete Event Systems

    Stochastic discrete event system analysis and verification are essential in order to ensure reliability in such systems. However, models that cannot be constructed with an hand-made process need to be learned. Thus, the SDES toolbox proposes an automated solution that is embedded in Matlab to learning and analisis generalized semi-Markov processes.
    Downloads: 0 This Week
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  • 9
    The Hybrid Calculus of Wrapped Compartments is a language for the modelling of biological processes; it combines the precision of a stochastic approach with the efficiency of a ODE-based one. HCWC-sim is a OCaml implementation of the HCWC calculus.
    Downloads: 0 This Week
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  • 10
    The aim of this project is to provide platform independent software that supports the visualization of advanced mathematical concepts (e.g. stochastic processes, random walks, percolation, clusters, etc.).
    Downloads: 0 This Week
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  • 11
    ...It provides methods such as the Kalman, unscented Kalman, and particle filters and smoothers, as well as useful classes such as common probability distributions and stochastic processes.
    Downloads: 0 This Week
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  • 12
    KStochastic gives the user the ability to create pictures of stochastic processes based on arbitrary probability distributions. Those pictures can then be used for illustration purposes in various publications treating random phenomena.
    Downloads: 0 This Week
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