Search Results for "joint"
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Showing 36 open source projects for "joint"
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Orca Core
Core Python Controller of the ORCA Hand
...The framework also supports real-time control and testing, allowing users to connect to the device, enable torque, and issue precise joint movement commands programmatically. -
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MuJoCo
Multi-Joint dynamics with Contact. A general purpose physics simulator
MuJoCo, developed and maintained by Google DeepMind, is a high-performance physics engine designed for simulating complex, articulated systems that interact through contact. It is widely used in research fields such as robotics, biomechanics, computer graphics, animation, and machine learning, where fast and accurate physics simulations are essential. The engine provides a robust C API optimized for real-time computation, making it suitable for scientific research and advanced simulation... -
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ANUGA is a software implementation of a hydrodynamic model which is specifically designed to model wetting and drying processes. ANUGA is a joint development project between Geoscience Australia (GA) and the Australian National University (ANU). ANUGA is now being developed on github at https://github.com/anuga-community/anuga_core For information on ANUGA please go to http://anuga.anu.edu.au The ANUGA project is described on http://en.wikipedia.org/wiki/ANUGA_Hydro
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BBMap
BBMap short read aligner, and other bioinformatic tools.
This package includes BBMap, a short read aligner, as well as various other bioinformatic tools. It is written in pure Java, can run on any platform, and has no dependencies other than Java being installed (compiled for Java 6 and higher). All tools are efficient and multithreaded. BBMap: Short read aligner for DNA and RNA-seq data. Capable of handling arbitrarily large genomes with millions of scaffolds. Handles Illumina, PacBio, 454, and other reads; very high sensitivity and... -
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jif3d
3D Joint Inversion Framework
This repository is now outdated. The current version of jif3D is available from https://git.tu-berlin.de/applied-geophysics/jif3d -
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MAF
Bash Framework to combine many preprocessing and alignment tools
DNA and RNA nucleotide sequences are an ubiquitous element of all biological cells and are serving on one hand as a comprehensive library of capabilities for the cells and on the other as an impressive regulatory system to control cellular function. The presented multi-alignment framework (MAF) should give researchers a simple sequence alignment platform as a functional template, flexible enough to adjust all steps but also comprehensive enough to join many different tools and custom... -
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CAMPARI
Software for molecular simulations and trajectory analysis
...We have added a number of new features, most notably a Python interface for interpreting user-supplied code (with the help of ForPy), a novel trajectory storage standard (with the help of libpqxx/PostgreSQL), and a module for performing transition path theory. Naturally, CAMPARI continues to provide the reference implementation of the ABSINTH force field paradigm and implicit solvation model. CAMPARI is a joint package for performing and analyzing molecular simulations, in particular of systems of biological relevance. It focuses on a wide availability of algorithms for (advanced) sampling and is capable of combining Monte Carlo and molecular dynamics in seamless fashion. CAMPARI offers the user a very high level of control over all implemented features. ... -
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FungiRegEx
FungiRegEx
This tool is a web-based search engine for regular expressions in the proteomes, all the information is obtained from the JGI (Joint Genome Institute) database through a scraper for all the available species; therefore this tool only considers fungi organisms. In this version, we use React JS in front-end and NodeJS + Express for back-end. Full Documentation Available on: https://victormiguelterronmacias.slite.page/p/J7BJU3hXhd72EJ/FungiRegEx-Software-documentation If you want to buy me a coffee: https://www.paypal.com/donate/?... -
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JDFTx
Joint Density Functional Theory
JDFTx is a plane-wave density functional theory code designed for electronic structure theory development. One prominent unique capability is the treatment of solvated electronic systems using joint density functional theory. Please see http://jdftx.org for download and compile instructions, tutorials, documentation and citation information. -
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Please see https://github.com/BRIO-lab/Joint-Track-Machine-Learning for the latest version of the JointTrack/JointTrack Auto lineage.
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BPPS-SIPRIS
sequence/structural analysis programs
A suite of statistically-based programs for inferring joint sequence-structural determinants of protein functional specificity written in C/C++ within a linux environment. -
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XML-Print
XML-Print: typesetting arbitrary XML documents in high quality
"XML-Print" is a joint project of the FH Worms (Prof. Marc W. Küster) and the University of Trier (Prof. Claudine Moulin) with support from TU Darmstadt (Prof. Andrea Rapp). Its goal is the creation of a XML formatter designated especially for the needs of the “Digital Humanties”. The project is funded by the DFG. Please visit https://sites.google.com/a/budabe.eu/xmlprint_de/kontakt and let us know, what you think about XML-Print – Does it meet your expectations? -
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An implementation of the Joint Generation Algorithm of Fredman and Khachiyan for the computation of a dual pair of monotone boolean formulas in DNF (hypergraph transversals, extreme rays of polyhedral cones...). User-replaceable oracle.
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CENSLIB
3D simulation library
A 3D simulation library using the bullet physics engine and OpenGL for rendering. -
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Lagrangian Dynamics NF Sims
Articulated-body simulation engine written in C
Articulated-body simulation engine written in C: based on the Lagrangian Dynamics, even if on a modified flavour of it, I deviced to make it more friendly in the context of numerical simulations. The overall simulation procedure (de facto a full 3D, an articulated-body simulaiton engine) is called: "Lagrangian Dynamics' New Flavour Simulations". It is delivered through sample-simulators relying on it. The modified falvour of the Lagrangian Dynamics here proposed is also a bit... -
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MatODE
Matlab interface to the Open Dynamics Engine (ODE)
MatODE is a simple Matlab toolbox for interfacing to the Open Dynamics Engine rigid body physics simulator (ODE, by Russell Smith), created by the Delft Biorobotics Lab (Delft University of Technology, Delft, The Netherlands). The system to be simulated is defined in an XML file, while the joint positions and motor signals can be sensed and actuated from a Matlab script. Examples are provided. Starting at version 0.30, MatODE is only available for Windows and Linux 64-bit. For older 32-bit versions, select "Browse all files". -
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PanelCheck is an easy-to-use software tool for visualization of sensory profiling data using different types of plots. The joint information from the implemented plots provide detailed insight into assessor and panel performance.
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SITools2 is a new CNES generic tool performed by a joint effort between CNES and scientific laboratories. The aim of SITools is to provide a self-manageable data access layer deployed on already existing scientific laboratory databases.
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Fast Alignment Search Tool suite. A fast sequence read mapper suite for short reads generated with the Illumina platform. Contains mrFAST and mrsFAST. Joint development by University of Washington and Simon Fraser University
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The software is developed for calculations of hierarchy big circuits by methods of the tensor analysis of networks and diakoptic. It is planned also to application for joint calculation of circuits and the fields presented by electrical equivalent circuits. For input of circuits editor KiCAD is used.
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RIPE (Regulatory network Inference from joint Perturbation and Expression data) is a novel three-step method that integrates both perturbation data and steady state gene expression data in order to estimate a regulatory network. The ripe package is written in R, with additional functionality provided by a MATLAB executable file. The executable file uses a runtime engine called the MATLAB Compiler Runtime (MCR).
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amici
AMICI enables real-time execution of cyber-physical models (Simulink)
...AMICI includes two main software units that have been developed in C# (Windows) and have been ported on Unix-based systems with the help of the Mono platform. AMICI has been primarily tested in FreeBSD-based systems. AMICI is developed by the European Commission's Joint Research Centre (JRC) For further documentation and acknowledgements please refer to http://ipsc.jrc.ec.europa.eu/?id=819 -
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This program is designed to emulate the Manus Arm created by Exact Dynamics (www.exactdynamics.com) to allow users, hobbiests, Universities, etc. to have an opportunity to develop software for this robotic arm. Please grab the source from SVN.
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Bayesloc
Bayesian Hierarchical Seismic Event Locator
Given a set of seismic arrivals for one or more events, Bayesloc estimates the joint probability of event locations, corrections to travel time predictions, precision of arrival time measurements, and phase labels for the arrival times. Bayesloc also accepts probabilistic prior constraints on any of the input parameters, which can significantly tighten the distribution of all parameters. -
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....: filesystem, JMS, RMI, Smart-Spaces, etc.).Its plugin-based architecture allow users to develop and adopt thei own plugins and configure WSN fuse to better suit their needs. This project has been partially supported by the CHIRON EU research project co-financed by the artemis joint undertaking (http://www.chiron-project.eu/) .
