Search Results for "encode"

...If you're using Sass for instance, you can allow codelyzer to analyze your styles by creating a file .codelyzer.js in the root of your project (where the node_modules directory is). In the configuration file can implement custom pre-processing and template resolution logic. Lint rules encode logic for syntactic & semantic checks of TypeScript, HTML, CSS and Angular expressions source code.

PACKEIS is a software that allows us to assess whether or not a coding sequence represents an extreme solution in terms of backfolding, considering the alternative coding sequences that could have been realized by evolution in order to encode the given peptide sequence based on usage of synonymous codons.

...It also incorporates TCGA CpG methylation (microarrays) and gene expression (RNA-Seq) data, as well as methylation-expression correlation analysis results for 20 human cancer types. ENCODE genome regions annotation data are also integrated in MethyMer

...After mapping, a CAGE peak on the genome indicates the position of an active transcriptional start site (TSS) and the number of reads correspond to its expression level. CAGE is prominently used in both the FANTOM and ENCODE project. MOIRAI is a compact yet flexible workflow system designed to carry out the main steps in data processing and analysis of CAGE data. MOIRAI has a graphical interface allowing wet-lab researchers to create, modify and run analysis workflows. Embedded within the workflows are graphical quality control indicators allowing users assess data quality and to quickly spot potential problems. ...

Crosshub enables multi-way analysis of RNA-Seq, miRNA-Seq and methylome data of The Cancer Genome Atlas (TCGA) project: 1. differential expression analysis (genes, alternative transcripts and miRNA) 2. regulatory miRNA prediction (TargetScan, DIANA microT, mirSVR, PicTar, miRTarBase + co-expression) 3. regulatory TF prediction (ENCODE ChIP-Seq + co-expression) 4. methylation profiling analysis 5. RNA-Seq vs. clinical (TNM, stage, follow-up) correlation analysis Generates Excel summaries. For details, see the manual or article G.S. Krasnov et al. NAR 2016, Pubmed ID: 26773058

Encode Arabic provides tools for encoding and decoding Arabic in Haskell, Python, Perl, or LaTeX. Interprets the ArabTeX notation to generate original orthography or phonetic transcription. Supports Buckwalter and other romanizations. Converts legacy byte encodings into Unicode. http://github.com/otakar-smrz/encode-arabic

Note: This version requires additional SQLite database files. Contact the developers to obtain them. Use http://www.integrativegenomics.org/ for the latest data and analyses. GenomeRunner is a tool for automating genome exploration. It performs annotation and enrichment analyses of user-provided genomic regions (SNPs, ChIP-seq binding sites etc.) against >6,000 (human genome) epigenomic features available from the UCSC genome browser. Input - any genome-wide data data in .bed...

...Object oriented HL7 2.X parser. This was ported from the original HAPI by Bryan Tripp and University Health Network. HL7 parser/encoder written in Microsoft .Net C#. Can encode/decode both XML and Pi

GMM-GMR is a light package of functions in C/C++ to compute Gaussian Mixture Model (GMM) and Gaussian Mixture Regression (GMR). It allows to encode any dataset in a GMM, and GMR can then be used to retrieve partial data by specifying the desired inputs.

Extension library for Ruby to decode/encode WMO GRIB messages.

The IPDR.org reference libraries encode and decode IPDR usage documents in either XML or the binary format. Libraries are available in C and Java.

The algorithm allows any kind of weights (costs, frequencies), including non-numerical ones. The {0, 1, ..., n-1} alphabet is used to encode message. Built tree is n-ary one.The algorithm is based on a set of template classes : Cell(SYMBOL, WEIGHT), Node(

TextCodec can encode texts using simple algorithm and then decode them by using statistical language data.

Nasira is a Java library for reading text files with non-ASCII characters (e.g. documents in German, Swedish,...). To do so, it automatically determines the character encoding (iso-8859-1, utf-8) used to encode the file through user-provided hints.

The LTCodeSimulator (LTCodeS) implements the fountains code LT Code. This kind of codification was developed to obtain a simple algorithm based on the exclusive or operation to encode and decode the message.