Search Results for "gnu/linux" - Page 77
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Showing 17429 open source projects for "gnu/linux"
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lnlc
lnlc calculates linear nlc-width and corresponding expressions
lnlc calculates linear nlc-width and corresponding linear nlc-width expressions. On 2014's computers it works quite well up to graph sizes of about 10 nodes of linear nlc-width 3. The runtime depends on the size of the input graph, its linear nlc-width, and the number of nodes of high degree. The archive also contains the widths and corresponding expressions for the trees of up to 12 nodes. -
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Program wordTabulator is intended for text analysis. It can generate index of word elements extracted from defined text set. Word elements may be words, N-grams or phrases (syntagmes). The program can process texts as in ordinary 1-byte encoding (ANSI), as in multibyte UTF-8 encoding.
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obo An umbrella organization for ontologies and structured shared controlled vocabularies for use across all biological and biomedical domains
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EtherLab EtherCAT Master
IgH EtherCAT Master for Linux
This project has been moved to https://gitlab.com/etherlab.org/ethercat. -
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The main goal of this project is to develop new algorithms of machine learning and collect examples of existing methods. This collection pursues scientific and educational purposes.
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ombakwarna
Spreadsheet based graphical and analysis software
OmbakWarna is a spreadsheet based graphical analysis software utilizing numpy and matplotlib as analysis and graphic tools. Its design is inspired by IgorPro software. It is licensed under GNU General Public License, version 2. This is still works in progress. Some widgets are without functionality. There is no manual yet, but a few videos were uploaded to the files section showing simple tutorials for some plotting capabilities. The videos are also available in youtube: https://www.youtube.com/channel/UCg7yftEQ37fb8z89w9twhaQ -
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COHCAP
City of Hope CpG Island Analysis Pipeline
COHCAP (City of Hope CpG Island Analysis Pipeline, pronounced "co-cap") is an algorithm to analyze single-nucleotide resolution methylation data (Illumina 450k methylation array, targeted BS-Seq, etc.). Please note: 1) The SourceForge version of COHCAP is no longer being updated. Please see the GitHub version: https://github.com/cwarden45/COHCAP This was the source repository for the Bioconductor version, with some changes after the decision to only provide the code through... -
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Combinatorial Game Suite
A computer algebra system for research in combinatorial game theory.
STARTING WITH VERSION 2.0, CGSUITE HAS MOVED TO GITHUB. The latest version can be found at the CGSuite homepage: https://www.cgsuite.org/ This page is preserved for archival purposes only and is no longer being maintained. -
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gsasnp2
PubMed ID: 29562348 / DOI: 10.1093/nar/gky175
... * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data using GSA-SNP2", Nucleic Acids Research, Vol. 46(10), e60(2018). * PubMed ID: 29562348 * DOI: 10.1093/nar/gky175 -> PLEASE MOVE OR MAKE A COPY OF 'DATA' FOLDER INTO YOUR INTENSIVE TEST FOLDER (I.E. LINUX, MAC OR WINDOWS SPECIFIED FOLDER) TO ALLOW THE PROGRAM TO FIND THE PREDESIGNED DATA. * UPDATE NOTE: -> Sep-1-2020: add an update for Ubuntu-20.04. You will need Boost library installed (sudo apt-get install libboost-all-dev) -> Mar-7-2018: revise header terms in the output file -
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We are developing data standards and software tools that implement these standards to develop a systemic approach to modeling, capturing, analyzing and disseminating flow cytometry data.
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FidoCadJ
Simple and intuitive 2D vector drawing for electronics and not only.
A multiplatform vector drawing program with a complete library of electronic symbols. Schematics and drawings are stored in a very compact text format. There is no netlist concept behind the drawings (so no simulation, and this is a choice) but this allows a great graphical flexibility and ease of use, making FidoCadJ the perfect tool for exchange sketches in forum and newsgroup discussions with a few clicks. Drawings can be exported in several graphic formats, such as pdf. Follow the... -
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Artha is a handy thesaurus based on WordNet with distinct features like global hotkey look-up, passive desktop notifications, regular expression based search, etc.. Artha may be used as a free open-source replacement to the proprietary WordWeb Pro.
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The most recent distribution of MyOpenLab can be downloaded from: myopenlab.org Follow us on Facebook as MyOpenLab Colombia https://www.facebook.com/myopenlabcolombia/ Subscribe, like and watch our MyOpenLab videos: https://www.youtube.com/channel/UCet6UPnaHKGjtbytJHIf2jQ Thanks!
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Rainflow
Fast rainflow counting written in C (C99)
Rainflow Counting Algorithm (4-point-method), C99 compliant. "Rainflow Counting" consists of four main steps: 1. Hysteresis Filtering 2. Peak-Valley Filtering 3. Discretization 4. Four Point Counting Method: These steps are fully documented in standards such as ASTM E1049 "Standard Practices for Cycle Counting in Fatigue Analysis" [1]. This implementation uses the 4-point algorithm mentioned in [2]. To take the residue into account, you may implement a custom method... -
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Java library of statistical distribution functions. Classes implement the PDF, CDF, and (usually) quantile and random variate generation for many common distributions.
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Antimony
Antimony is a human-readable, human-writable model definition language
Antimony is a human-readable, human-writable model definition language. libAntimony is a library that will read and write Antimony and SBML files and provides an API for other programs to import Antimony models into their own internal formats. -
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Poli
An easy-to-use BI server built for SQL lovers. Power data analysis
An easy-to-use BI server built for SQL lovers. Power data analysis in SQL and gain faster business insights. Platform independent web application. Single JAR file + Single SQLite DB file. Get up and running in 5 minutes. PostgreSQL, Oracle, SQL Server, MySQL, Elasticsearch... You name it. No ETLs, no generated SQL, polish your own SQL query to transform data. Pixel-perfect positioning + Drag'n'Drop support to customize the reports and charts in your own way. Utilize the power of dynamic SQL... -
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FRUITS
Food Reconstruction Using Isotopic Transferred Signals
Description IMPORTANT NOTICE: The current release of FRUITS (FRUITS 3.1) will be the last as a Windows installer. This version is the closest to the soon to be released R-based ReSources package as part of the IsoMemo initiative. FRUITS is a Bayesian mixing model for diet reconstruction using isotopic data. -
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verilog_code_collection
my personal verilog code collection
some basic stuff, basic building blocks, which might result in some electric drive, DSP, microprocessor code... -
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GapFiller
A de novo local assembler for paired reads
GapFiller is a seed-and-extend local assembler to fill the gap within paired reads. It can be used for both DNA and RNA and it has been tested on Illumina data. GapFiller can be used whenever a sequence is to be assembled starting from reads lying on its ends, provided a loose estimate of sequence length. -
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Jafama
A (Strict)FastMath class with 1e-15ish accuracy.
Jafama (Java Fast Math) consists of fast - but not sloppy - counterparts of java.lang.Math treatments, plus additional ones. They are usually about 2-4 (up to 15) times faster, with about 1e-15 accuracy, and handle special cases (NaN, etc.). Since version 2.1, a StrictFastMath class is also provided. It is a strictfp version of FastMath (and not a fast version of StrictMath): for a same version of this library, its methods always return a same result for same arguments, which might not... -
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A Java library for evolutionary biology and bioinformatics, including objects representing biomolecular sequences, multiple sequence alignments and phylogenetic trees.
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Corona Tracker
Coronavirus tracker app for iOS & macOS with maps & charts
Coronavirus tracker app for iOS & macOS with map & charts. https://coronatracker.samabox.com/ -
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Spectral Python
A python module for hyperspectral image processing
Spectral Python (SPy) is a python package for reading, viewing, manipulating, and classifying hyperspectral image (HSI) data. SPy includes functions for clustering, dimensionality reduction, supervised classification, and more.
