Search Results for "java projects on linux" - Page 68
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Showing 4726 open source projects for "java projects on linux"
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An integrated bioinformatics toolkit for analysis of ChIPseq data from the Illumina DNA sequencing platform. Includes filtering, quality control, simulation, peakfinding, visualization, and comparison of samples.
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jCAE is a JAVA based environment for CAE applications. It provides meshing and visualization capabilities. It is targetted to run on a maximal number of platform.
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JBoost is a simple, robust system for classification. JBoost contains implementations of several boosting algorithms in an alternating decision tree framework. In addition, JBoost provides extensible software for adding more learning algorithms.
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EvoPromoter is a JAVA application that detects promoter regions in aligned nucleotide sequences using phylogenetic hidden markov models.
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CallSim
low-volume read processing base corrector
CallSim is a software application that provides evidence for the validity of base calls believed to be sequencing errors and it is applicable to Ion Torrent and 454 data. CallSim provides a final classification or rescue of a base/indel in reads, where putative variants have been identified via typical SNP/indel workflows. plots rendered by: JFreeChart library http://sourceforge.net/projects/jfreechart/ -
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This project provides a set of libraries written in Java to easily manipulate Multi-Criteria Decision Aid (MCDA) concepts, especially related to outranking methods, and XMCDA files.
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GAMES ESMI
The Energy Sensing and Monitoring Infrastructure of the GAMES project
This is part of the GAMES Project, which consists of a set of innovative methodologies and Open Source ICT tools for designing and managing energy efficiency in IT Service Centres. The ESMI is the monitoring and sensing infrastructure which allows the fine-grained measurement and provides both an event-based and a real-time stream of data conveying information about the energy consumption in the key points of the overall system. It is completed by a set of Nagios plugin and an assessment... -
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YANG (Yet Another Network Generator - Java) enables you to generate social networks given various social rules observed in the real population. Uses: generate realistic networks to be used in individual-centric models, teaching or benchmarking.
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iTLogger
Log and evaluate data from your smartphone and OBD
iTLogger is the result of a software project at TU Ilmenau in 2012. Its aim was to create an app and corresponding desktop programm, so that people could track their journey on forest roads and later evaluate the data on their desktop. With the logged data you can evaluate the quality of forest roads. Available on Google Play: https://play.google.com/store/apps/details?id=de.tui.itlogger -
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An IDE for CellML 1.1 user models developed in UNSW as an open source project. Author: Mitchell Lanesbury 2012
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Tux Resistor
Electronics Tool to interpret Resistor Color Codes and viceversa.
Tux Resistor is an Interactive Electronics Tool which can be used to convert Resistor color bands to Resistor values and vice versa. -
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PetriNetExec: Java Embeddable Petri Nets
PetriNetExec a library for embedding Petri Nets into Java applications
Briefly said, PetriNetExec is an open-source Java library which allows you to embed Petri Nets into your Java application. Using PetriNetExec you can define places and transitions, connect them using arcs and inhibitors, define the initial marking and then fire events and see how tokens flow into the network. * PetriNetExec does not provide a GUI for editing the network nor will it provide in the near future. That is not really a feature :-) but to those of you able to cope with this... -
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Linking Yabi with RDA
This software system enables publication of YABI workflows to the RDA.
Modern life science research requires bringing together Biology and Information technology. To help make this process easier, the CCG has developed YABI, an Internet based workflow application that is aimed at biologists who wish to conduct bioinformatics analysis. YABI integrates bioinformatics tools and data via an intuitive workflow creation and management environment. YABI can be used to access the NCI-SF in Bioinformatics and the tools available through the Embl Australia EBI mirror... -
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CvHMM
Discrete Hidden Markov Models based on OpenCV
This project (CvHMM) is an implementation of discrete Hidden Markov Models (HMM) based on OpenCV. It is simple to understand and simple to use. The Zip file contains one header for the implementation and one main.cpp file for a demonstration of how it works. Hope it becomes useful for your projects. -
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samsn
A tool to handle multi-stage mass spectrometry data
The source code for SAMSN can be found in github at https://github.com/miquelrojascherto/samsn -
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JAVA Arabic Stemmer
A JAVA class with a small functionality that is stemming Arabic words
A JAVA Arabic stemmer that is based on Shereen Khoja algorithm. This java class offers a function called stemWrod which takes an arabic word and return the stem of it. -
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Substitution cipher cracker based on ant colony optimization metaheuristic. Includes GUI. Everything is in czech because this is a school project :(
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jLab est une plate-forme scientifique destinée à être l'outil de travail privilégié des étudiants, enseignants, ingénieurs, scientifiques et chercheurs. jLab est totalement modulaire et facilement extensible via un système de modules
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vtSim
vtSim is a traffic data and simulation management environment
vtSim is a traffic data, simulation and results management environment. It has been created by the Chair for Traffic Engineering and Control, Technische Universität München (http://www.vt.bv.tum.de/). -
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The Open Decision Makes enables you to find the best alternative for a defined goal with the AHP (Analytic Hierarchy Process) method.
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jPeriodic
jPeriodic is a table of elements written in Java
jPeriodic is a simple table of elements coded in Java providing the user with the most common informations about each known chemical element. By clicking an element a popup will apear containing the selected elements attributes. Additionaly jPeriodic offers a small temperature converter which is able to convert between Celcius and Kelvin. Because jPeriodic is coded in Java the software is platform-independent, meaning you can run jPeriodic on Windows, Mac OS, Linux and many other operating systems which are able to run a Java Virtual Machine. -
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QUASR
Cross-platform NGS processing and analysis pipeline in Python
QUASR is a lightweight pipeline written to process and analyse next-generation sequencing (NGS) data from Illumina, 454, and Ion Torrent platforms. Although originally written for viral data, it is generic enough to work on any NGS dataset. Functions include: duplicate removal demultiplexing primer-removal quality-assurance (QA) graphing quality control (QC) consensus-generation minority-variant determination minority-variant graphing The main current version is 6.X, which is... -
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Yet Another Data Mining Platform
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JFlightPlanner
Flight Planning tool.
Flight planning tool, designed for General Aviation pilots. Includes Aviation Weather Center METAR and TAFs queries.
