Search Results for "sql command line" - Page 62
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Showing 2657 open source projects for "sql command line"
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FONZIE is a bioinformatic tool written in Python developed for the genetic cartography speciality. FONZIE allow as well to find markers on a set of sequences than to find associate oligonucleotides. http://www.biomedcentral.com/1756-0500/3/322/abstra
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An R package implementation of a consensus clustering methodology. This package allows users to perform re-sampling statistics based clustering using multiple clustering algorithms to assess the robustness of both clusters and members of clusters.
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GridSim allows modeling and simulation of entities in parallel and distributed computing systems such as users, applications, resources, and resource brokers/schedulers for design and evaluation of scheduling algorithms. http://www.gridbus.org/gridsim
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clac (Command Line Advanced Calculator) evaluates mathematical expressions from the argument list or from stdin and writes the answer(s) to stdout.
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Windows command line utility calculating protein orthologs using best reciprocal hit from BLAST alignment output
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pHaskell is a new lenguaje to develop active libraries in a functional way. pHaskell translate from a haskell like language to C++ template metaprogramming.
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Suite of software tools for transcription factor binding site search, gene annotation, and orthology filtering. Some tools in the CisOrtho package are required along with MAQ for use in MAQGene.
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fick is fluid diffusion simulator (for both liquids and gases): it uses the Flick diffusion laws to drive the evolution of a cellular automata.
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A system for symbolic chemical database for analysis and generation. The main use is to generation the information necessary for a oxidative combustion mechanism to be used in programs for combustion mechanisms.
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Algorithm Based Automatic Contiguation of Assembled sequences (ABACAS) is an integrated platform for quickly contiguating reference based assemblies.
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The E* algorithm is a path planner for (mobile) robotics. Unlike A*, which constrains movements to graph edges, it produces smooth trajectories by interpolating between edges. Like D*, it supports dynamic replanning after local path cost changes.
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Algorithms that optimally & efficiently map atomic reactions. See 1) Atomic Reaction Mapping {Crabtree: amazon, b&n} 2) J. of Exp. Algorithmics, Vol 13 {Crabtree, Mehta} 3) J. Chem. Inf. Model., 2010, 50 (9), pp 1751–1756 {Crabtree, Mehta, Kouri}.
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This project hosts tools used for analysis of Gaussian Mixture Distributions (GMDs) which are used for statistical signal processing. The tools are libraries for implementing GMD operations and programs used to analyze properties of GMDs.
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This is a fast C implementation of Arturo Camacho's SWIPE' pitch extraction algorithm. See the project homepage for more about the advantages of the SWIPE' algorithm. swipe-1.0.tar.gz contains the current source, which should compile quite neatly.
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Text2Genome is a set of scripts to extract nucleotide sequences from scientific articles and to map them to genomes and genes using a local alignment algorithm (BLAST/BLAT)
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Torch5 provides a matlab-like environment for state-of-the-art machine learning algorithms. It is easy to use and provides a very efficient implementation, thanks to a easy and fast scripting language (Lua) and a underlying C++ implementation.
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Worst Cases is a python script that enables calculations on worst case objects. Like a calculator operating on worst cases (e.g. [1,2,3]) rather than on real numbers (2.35) WARNING: This program is released as is, and has never been extensively teste
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The DNA Sequence Read Toolkit is a set of programs to convert data from DNA sequencing instruments into formats suitable for archiving, viewing or for onward processing (for example alignment or assembly).
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All pairs n-body simulation of electromagnetic forces on charged particles, adapted from Nvidia SDK 3.2 sample. Uses Lorentz force from EM fields via the Biot-Savart law for moving charged particles (uses relative velocity). Relativistic.
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FusionMiner is a molecular biology program which accepts genomic alignments in BLAST/BLAT tabular output and attempts to find true fusion transcripts. A single command runs the pipeline and generates results.
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