Search Results for "linux command" - Page 54
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Showing 2463 open source projects for "linux command"
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ODD is a tool for optimal domain decomposition of atomic structure guided by the given molecular dynamics data.
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A set of command-line utilities for annotating and manipulating DNA sequences in FASTA format. Generate restriction fragments, ORF's, translations, reverse complement, etc. . - and tie it all together with Unix pipes for complete virtual cloning.
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DIGIgrain is a general 3D data processing, data reduction program for 3D X-ray Diffraction Microscopy (3DXRD) and High-Energy Diffraction Microscopy (HEDM) measurements. It is designed to be used for analysis of both near-field and far-field images.
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**Decrepit notice** This project is now being replaced by a much snazzier platform that integrates QGIS and GMSH. See https://launchpad.net/meshing for further details. Project goal is to generate a toolkit for 2D and 3D bathymetric mesh generation via an anisotropic adaptive mesh method. Emphasis is on approximation with clearly defined error goals so that the final model is quantitatively useful.
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miRDeep-P,miRDP for short, is a computational tool for analyzing the microRNA (miRNA) transcriptome in plants.
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The Simple Semantic Classifier classifies short chunks of natural language text into broad semantic classes that correspond to the OBO ontologies provided as input.
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Rdd is a forensic copy program developed at and used by the Netherlands Forensic Institute (NFI). Unlike most copy programs, rdd is robust with respect to read errors, which is an important property in a forensic operating environment.
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The aim of our project is to develop a simulation system to calculate the measurement uncertainty corresponding to the 'Guide To The Expression Of Uncertainty In Measurement' (GUM).
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EPSILON is a powerful Open Source wavelet image compressor. The project is aimed on parallel and robust image processing.
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Soaplab is a generator of Web Services providing a programmatic access to command-line (and other) applications on remote computers (an example of its usage is available at http://www.ebi.ac.uk/soaplab/)
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A set of software utilities for processing and analyzing 16S rRNA genes including generating NAST alignments, chimera checking, and assembling paired 16S rRNA reads according to reference sequence homology.
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An R package that performs forward-backward fragment assembling segmentation. Reference: BMC Bioinformatics. 2007 May 3;8:145.
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naga EDA devotes to provide useful electronic design tools in C++ and, especially, Python. The current release contains naga.Verilog, a Verilog parser. Please visit project homepage http://naga-eda.org for more information
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CNC Dynamics Sim is an environment for testing new motion control algorithms, path interpolators, and path planning strategies, and how these affect the dynamics of a CNC machine.
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Imitation of co-evolution with the populations of wolf and sheep.
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Framework for the Analysis and Modification of EDIF netlists (FAME) is a C++ framework, developed at Politecnico di Torino, aimed at automating the analysis and modification of complex circuit netlists described in the standard EDIF 2.0.0 language.
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Ion Chromatography Data Analyzer for analyzing wasted oil. Can parse data file from HW2000 workstation.
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A small command line tool to process streams of numbers and spit out the running total, bin the results or merge duplicates. Supports arbitrary precision numbers. ocdf is named for the cumulative distribution function in probability.
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Simulated annealing for cell tracking (assignment problem in 4D) with scheme for removing low energy nodes from consideration ("quenching").
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SPLITNEURON is a completely new approach to large-scale, biologically plausible, neural-network simulation library based on data structures and methods directly coded into database and conceived to explicitly share load on multiple machines.
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Echoproc is a piece of scientific analysis software used to extract physical ice sheet characteristics from radio echograms from experiments like the Center for the Remote sensing of ice sheets (https://www.cresis.ku.edu/)
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A simple but powerful bulk file statistics calculator. Given operation(s) and a list of files containing identical text fields and corresponding numerical fields this program calculates and outputs a similar file with the numerical op performed.
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This software computes likelihoods for infinitely-many-sites sequence data under multiple merger coalescents. The likelihood can be computed exactly or approximated via importance sampling.
