Search Results for "processing" - Page 20
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Showing 1029 open source projects for "processing"
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Java application for training and deploying text processing applications such as part-of-speech taggers, based on a re-implementation of Brill's algorithm in Java.
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PipeDream is a *nix processing pipeline for analysis of large single or multi-modality neuro-imaging data sets. PipeDream is no longer being updated in this repository. Code will remain here as an archive of processing methods that were applied to published data using PipeDream. If you are looking for data organization and pre-processing code, please see the new version of PipeDream on GitHub: https://github.com/cookpa/pipedream It is still very much a work in progress but has dicom2series, dicom2nii, nii2dt. ...
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Point Cloud Library
Standalone, large scale, open project for 3D point cloud processing.
The Point Cloud Library (PCL) is a standalone, large scale, open project for 2D/3D image and point cloud processing. PCL is released under the terms of the BSD license, and thus free for commercial and research use. We are financially supported by Open Perception, Willow Garage, NVIDIA, Google, Toyota, Trimble, Urban Robotics, Honda Research Institute, Sandia, Dinast, Optronic, Ocular Robotics, Velodyne, Fotonic, Leica Geosystems, and MKE. -
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FlowVR is an open source middleware tailored for high performance in situ data processing and analytics running on large parallel machines
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BioDare
BioDare is Biological Data Repository focused on timeseries data
BioDare (Biological Data Repository) was developed under the multi-site ROBuST project (http://hallidaylab.bio.ed.ac.uk/ROBuST.html) to support data exchange inside the project. It is a web application which allows data-sharing (including public dissemination), data-processing and analysis, with the main focus on time-series data produced in circadian experiments. The main features of BioDare are: - an online repository for experimental data accompanied by extensive metadata - generation of secondary data (normalized, detrended, averaged …) - graphical output of data, secondary data and rhythm analysis - simple text-based search throughout metadata - biology- and conditions-aware search for data - data aggregation and export - group-based privacy settings for collaborative research -
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AstroAviBrowser
Editing tool for astronomical videos
AstroAviBrowser is a small tool for astronomy imaging capture/processing. With AstroAviBrowser, you may open a video file, select the good frames and save the new sequence in a new avi file. It also debayer your raw sequences. -
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A Perl module and selection of scripts to aid processing of NEXUS-based tree files ready for supertree construction in programs like PAUP*.
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LinqYedict
Translate Chinese to English
Translate Chinese to English using CEDICT (cantonese dictionary). Demonstrate the speed of C# and Linq. Copy the chinese text from any browser/application to Windows clipboard and see the translation. -
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PolyCTLDesigner
Python scripts for designing polyepitope T-cell immunogens
Given the peptides (T-cell epitopes) PolyCTLDesigner selects flanking sequences to optimize TAP-binding and joins resulting oligopeptides into a polyepitope in a way providing efficient liberation of potential epitopes by proteasomal and/or immunoproteasomal processing and minimizing the number of junctional epitopes. For constructing polyepitopes PolyCTLDesigner utilizes known amino acid patterns of proteasome cleavage and TAP-binding specificity. PolyCTLDesigner is also able to choose antigenic peptides covering selected HLA repertoire with desired redundancy rate. Given the antigen sequences PolyCTLDesigner is also able to select T-helper epitopes. ... -
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LAVA for AFM
Lloyd's Algorithm-based Volumetric Analysis for AFM Images
This MATLAB-based program enables analysis of AFM images. In particular, it allows the user to measure the volume of all distinguishable features in an image and to isolate and sort those particles. As the name implies, LAVA uses Lloyd's Algorithm, also known as k-means sorting, to identify a small set of volumes representative of the actual distribution of particle in the image. Although developed for determining feature volume, LAVA is also completely compatible with other types of... -
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CDSbank
multi-sequence extraction, filtering & formatting
...CDSbank also stores Genbank feature annotation, a flag to indicate incomplete 5’ and 3’ ends, full taxonomic data, and a heuristic to rank the scientific interest of a species. This rich information allows fully automated data set preparation with a level of sophistication that meets or exceeds manual processing. Defaults ensure ease of use for typical scenarios while allowing great flexibility when needed. Access is via a free web service at http://hazeslab.med.ualberta.ca/CDSbank/. SourceForge code can be used to build a local installation. -
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fit2dcorr
SAXS 2D > 1D data reduction software, wrapper for Fit2D
...Please use the repository at https://github.com/Niels-Bohr-Institute-XNS-StructBiophys/fit2dcorr for the new updated versions. The old version is kept at sourceforge. Keywords: fit2d SAXS azimuthal averaging batch processing absolute units (exposure time, transmission, sample thickness) error bars C++ Unix OpenMP -
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TrackXY
Track & log x & y displacement, in realtime, of object in webcam
Track, in realtime, horizontal and vertical displacement of object in webcam. Log timestamp, x and y to comma-separated value (.csv) file importable to spreadsheet. Uses Lukas-Kanade algorithm and based on lkdemo.cpp in OpenCV, stripped down to track single point in high contrast against a uniform background. Based on the BSD licensed OpenCV, TrackXY also has BSD-style license. I am a bit embarrassed to be posting this here, because it's such a rudimentary program, but I couldn't find... -
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Malimpa stands for MAtlab Library for IMage Processing and Analysis. It provides functions for 2D/3D grascale/color image creation, filtering, or measurement. It requires, and complements Matlab Image Processing Toolbox. Important notice: the project is now hosted in GitHub, https://github.com/dlegland/matImage
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QVision: Computer Vision Library for Qt
Computer vision and image processing library for Qt.
This library contains among other things a set of graphical widgets for video output, performance evaluation and augmented reality. The library also provides classes for several data types usually required by computer vision and image processing applications such as vectors, matrices, quaternions and images. Thanks to a large number of wrapper functions these objects can be used with highly efficient functionality from third party libraries such as OpenCV, GNU Scientific Library, Computational Geometry Algorithms Library, Intel's Math Kernel Library and Integrated Performance Primitives, the Octave library, etc... -
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Quick Calculator 2
A Calculator Application
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iBRAIN2 Workflow Manager
A system for automated analysis and data handling for RNAi screens
The iBRAIN2 software system for RNAi high-content screening integrates automated analysis and customizable data management. It enables robust and complex parallel processing on computer cluster infrastructure and allows for reliable storage of primary and resulting data sets. -
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IDL specified API for manipulating and processing CellML 1.0 and 1.1. Includes C++ implementation. Accessible from a C++ program, or from any language for which a CORBA language mapping is available Also, a Java wrapper of the API is available.
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Hermes Natural Language Processing
A repository of software, documentation and data for NLP
Hermes is a repository of software, documentation and data for NLP. I am currently adding corpora extracted from Wikipedia (mostrly in Romance languages). -
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latexdiff is a Perl script, which compares two latex files and marks up significant differences between them (i.e. a diff for latex files). Various options are available for visual markup using standard latex packages such as "color.sty".
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...OpenFOAM has an extensive range of features to solve anything from complex fluid flows involving chemical reactions, turbulence and heat transfer, to solid dynamics and electromagnetics. It includes tools for meshing, notably snappyHexMesh, a parallelised mesher for complex CAD geometries, and for pre- and post-processing. Almost everything (including meshing, and pre- and post-processing) runs in parallel as standard, enabling users to take full advantage of computer hardware at their disposal. It was built with MinGW C++ in linux environment and using Symscape patch build brocess.
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CalcPi
This is a multiplatform program to calculate pi.
This program calculates pi and other mathematical constants to arbitrary precision, only limited by processing power and memory. Its main feature is not speed, but multiplatform capability and a nice GUI. -
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MDSTk is a collection of 2D/3D image processing tools aimed at medical images. It contains routines for volume data processing (3D filtering, segmentation, etc.) as well as fast low-level vector graphics library for surface and tetrahedral meshing. MDSTk has been forked by 3Dim Laboratory s.r.o. to provide better support and further push its development forward. Please check VPL (Voxel Processing Library) project available on Bitbucket (https://bitbucket.org/3dimlab/vpl).
