Search Results for "cell negative analysis" - Page 2

This is the prototype version of software for robust detecting and segmentation of cell nuclei in 3D fluorescence labeled microscopy images. First release coming soon...

Myrtle is a simple programmable spreadsheet and statistical analysis software specifically designed for learning statistics. It provides the standard spreadsheet functionality one would expect like multiple tabbed sheets, relative and absolute row and column referencing in formulas, and a large catalog of built-in functions. Functions specific to logic and computer science, mathematics, probability, and statistics are available. Student's can easily create, customize, and update plots...

Open-Cell-Id-Visualization (OCIViz) ========================= Tools to visualize and analyze opencellid data. Create Googlemaps overlays and statistics. http://www.opencellid.org/ Contains (2013-06) >60million datasets of celltower information worldwide. This project wants to find out: * how much data was gathered where * quality of the coverage * what can you do with the data (localization etc.) For more information on what works and todos, see the project wikipage: https...

Image analysis software for quantification of cell density in microbial cultures (e.g. S. cerevisiae) growing on solid agar plates. Specialises in detection of extremely low cell densities. Forms part of the Quantitative Fitness Analysis (QFA) workflow: http://research.ncl.ac.uk/qfa/ Suitable for high-throughput, genome-wide analysis of culture libraries when combined with the following qfa R package: http://qfa.r-forge.r-project.org/ This is the version presented, used...

... collection path, and a finite Raman source volume along the excitation laser beam. The model deals as well with the conditional aperture parameters, associated with more than one optical component in the light collection path. Finally, the model also takes into account polarization aberrations introduced by the sample cell windows.

ezBioNet is a biological modeling and simulation tool of molecular interaction that occurred in a cell. We aim that this software can be used for collecting biological data and making biological models to simulate it by biological researchers. ezBioNet can build a detailed biological model including signal transduction, enzyme kinetics, expression network, etc. It also support number of numerical analysis method to simulate the biological reaction networks.

RNAseqR is designed for expression analysis of RNA-seq data, and is best suited for analysis of multiple, unreplicated libraries. It is a C++ coded program currently compiled for Linux systems. With GUI and command line interfaces, it can do log, PPM, and/or RPKM (if lengths provided) transformations, as well as, statistical analysis for differential expression, using the negative binomial cumulative distribution function (CDF) or the R test statistic introduced for EST analysis by Stekel...

GoFigure2 is an open-source, cross-platform application for visualizing, processing and analyzing of multidimensional microscopy data. Users can visualize, segment and track cells through time, detect cell-division and ultimately generate lineages.

""" E-Cell's source code repository has moved to GitHub! https://github.com/ecell The development of E-Cell now continues on GitHub. The Subversion repository was abandoned. """ E-Cell System is an object-oriented software suite for modeling, simulation, and analysis of large scale complex systems such as biological cells. It allows many components driven by multiple algorithms with different timescales to coexist in a model.

The GPDE is a biological protein database based on the PRIDE xml format. It combines proteomics experiments based on the investigated cell type and creates a biological meta-analysis. Try it out at http://www.meduniwien.ac.at/proteomics/database.

BigBang/Horizon is a proteomics data analysis pipeline with focus on the shotgun LC/MSMS workflow.

FociCounter is a simple and user-friendly program for analysis of gamma-H2AX foci. It allows to determine the number of foci in a single cell, a foci intensity as well as a cell intensity.

Forensic tool designed to extract 3GP video files (regular files, deleted or fragments), SMS (regular, erased or fragments) and address books (regular, erased or fragments) from memory dumps of motorola V3i, V3r and V3D&G cell phones.

Modified ssSNPer. Phenotype info for EBV-LCLs (HAPMAP CEU) for a minor histocompatibility antigen (mHag) specific T cell is input. Output is the region containing the mHag. A step-by-step read-me will be included.Email r.m.spaapen@umcutrecht.nl for help.

The Stem Cell Artificial Neural network project entails the analysis and integration of genomics data for extracting the stemness signature of several tissues by training a multiclass single-layer linear artificial neural network.

Cell Motility Analysis Package analyzes timelapse sequences of moving cells. Various quantitites characterizing motility are calculated, including normal velocity of the membrane, cell contact area, and spatio-temporal auto-correlation functions.

Introducing Kaixax555's Addition Calculator! Calculating 20 whole numbers, decimals and negative numbers at a time!

Ocular is a spreadsheet written entirely in python. Cell contents are evaluated by python after any standard spreadsheet coordinates are parsed. This allows the full Monty from Python to be implemented in a visual environment.

Genetic programming environment to inference context free grammars base on positive and negative examples of language.

The project aims to make publishing of wildlife survey data easier using PHP Mapscript. By uploading survey or sightings data the user will be presented with a generalization map based on the Quarter Degree Grid Cell system.

The algorithm allows any kind of weights (costs, frequencies), including non-numerical ones. The {0, 1, ..., n-1} alphabet is used to encode message. Built tree is n-ary one.The algorithm is based on a set of template classes : Cell(SYMBOL, WEIGHT), Node(

Find the pitch of a power spectrum (signal) as per the afferent/efferent neural crossover. This occurs between the Lateral olivocochlear efferents and the inner hair cell afferents.

SimFoam is analysis software, developed originally in LMSPC laboratory. Based on the main morphological parameters of cellular materials (or open cell foam), it allows to estimate rapidly the transport property of porous media.