Showing 4726 open source projects for "java projects on linux"

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  • 1
    SBW (Systems Biology Workbench)

    SBW (Systems Biology Workbench)

    Framework for Systems Biology

    The Systems Biology Workbench(SBW) is a framework for application intercommunications. It uses a broker-based, distributed, message-passing architecture, supports many languages including Java, C++, Perl & Python, and runs under Linux,OSX & Win32. It comes with a large number of modules, encompassing the whole modeling cycle: creating computational models, simulating and analyzing them, visualizing the information, in order to improve the models. All using community standards, such as SED-ML, SBML and MIRIAM.
    Downloads: 4 This Week
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  • 2
    Perceptron

    Perceptron

    The birth of modern video feedback art.

    Perceptron is a video feedback engine with a variety of extraordinary graphical effects. Perceptron is an endless flow of transforming visuals. Perceptron * recursively transforms images and video streams in realtime and produces a combination of Julia fractals, IFS fractals, and chaotic patterns due to video feedback * evolves geometric patterns into the realm of infinite details and deepens the thought * records animations (movies) * saves and opens presets...
    Downloads: 0 This Week
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  • 3

    protoFrameworkSamples

    Samples for the protoFramework project

    Samples for the protoFramework project. See https://sourceforge.net/projects/protoframework/ for the master project. This is a Dassault Aviation project
    Downloads: 0 This Week
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  • 4
    nutshell

    nutshell

    A GUI for the freeware Geographical Information System PCRaster

    A GUI for the freeware Geographical Information System PCRaster. This is an independent development. It uses the conda installation of PCRaster and can also use GDAL. Mapedit has been completely renewed. The GIT repository is available linked to PCRaster and available here: https://sourceforge.net/projects/pcraster/ Mapedit code : https://github.com/vjetten/MapEdit NutShell code: https://github.com/vjetten/NutShell The code is currently compiled for windows systems but is tested...
    Downloads: 2 This Week
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  • 5
    Splicing Prediction Pipeline

    Splicing Prediction Pipeline

    Splicing Prediction Pipeline or SPiP

    SPiP is a tool to predict the splice alteration of variant by integrate several prediction tool in a global pipeline. You can also download SPiP in zip format: https://sourceforge.net/projects/splicing-prediction-pipeline/files/SPiP_alone_v2_1.zip For Linux (GitHub): https://github.com/LBGC-CFB/SPiP If you have questions, please contact me to: r.leman@baclesse.unicancer.fr or raphael.leman@orange.fr v2.1 corrected (07/2021) : correction of score calculation v2.1 (06/2021): Most strigent on "Alter by complex event" v2.0 (04/2021): New SPiP with random forest modelization old change detailled in https://sourceforge.net/projects/splicing-prediction-pipeline/files/changeLogBeforev2.0.txt
    Downloads: 5 This Week
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  • 6

    NGSpop

    NGSpop: identifying & visualizing sequence variation in deepvariant

    *NOTICE* The official software(NGSpop) will be updated soon, so please visit us in 2/29. Thank you.
    Downloads: 2 This Week
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  • 7
    Extended Java WordNet Library

    Extended Java WordNet Library

    extJWNL is a Java library to handle dictionaries in WordNet format.

    extJWNL (Extended Java WordNet Library) is a Java API for creating, reading and updating dictionaries in WordNet format. extJWNL is an upgraded version of JWNL. The library features support for creating, editing and writing dictionaries; dictionary encodings, including UTF-8; Java generics; huge dictionaries; instance dictionaries and static singletone dictionary; Maven and more.
    Downloads: 0 This Week
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  • 8
    Kalypso
    Kalypso is an open source application for geospatial modelling and simulation. It is primarily developed to be a user friendly tool for GIS-based modelling and simulation of hydrological and hydraulic numerical models.
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    Downloads: 8 This Week
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  • 9
    PAMGUARD

    PAMGUARD

    Detection Classification and Localisation of marine mammals

    The PAMGUARD project develops software to help detect, locate and classify marine mammals using Passive Acoustic Monitoring. This project is being migrated to github at https://github.com/PAMGuard. Please go there for the latest updates. thank you sourceforge for hosting us for all these years.
    Downloads: 0 This Week
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  • 10
    he JAVA library is designed to read JPL DE/LE ephemerides (DE200, DE405, DE406, DE421, DE422, DE430, DE431, DE440 and DE441) and to calculated the position and velocity of the Sun, Moon, eight major planets and Pluto, also the earth nutations and the lunar librations if they are part of the ephemeris.
    Downloads: 1 This Week
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  • 11
    OffRoad

    OffRoad

    Offline vector map display ported from OsmAnd

    An offline map viewer for the Desktop based on OsmAnd.
    Downloads: 16 This Week
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  • 12

    Planet And Hunting

    Hunting Planets in the Kepler Data

    This Program supports the Planet- and Variable-Hunting in the Kepler-Data.
    Downloads: 0 This Week
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  • 13
    PeerSim is a simulation environment for P2P protocols in java. Its features include easy configuration, extendability and high performance.
    Downloads: 27 This Week
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  • 14

    pyModSlave

    Modbus TCP/RTU Slave Software.

    pyModSlave is a free python-based implementation of a ModBus slave application for simulation purposes. You can install the python module or use the precompiled (for Windows only) stand alone GUI (Qt based) utility (unzip and run). pyModSlave also includes a bus monitor for examining all traffic on the bus. You can also download it from pypi <https://pypi.org/project/pyModSlave/>. pyModSlave is based on modbus-tk <http://code.google.com/p/modbus-tk/>, pySerial...
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    Downloads: 43 This Week
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  • 15
    AlphaPlot

    AlphaPlot

    Interactive scientific graphing and data analysis software.

    Alpha Plot can generate different types of 2D and 3D plots (such as line, scatter, bar, pie, and surface plots) from data that is either imported from ASCII files, entered by hand, or calculated using formulas. The data is held in spreadsheets which are referred to as tables with column-based data (typically X and Y values for 2D plots) or matrices (for 3D plots). The spreadsheets as well as graphs and note windows are gathered in a project and can be organized using folders. The built-in...
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    Downloads: 34 This Week
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  • 16
    Control System Studio (CS-Studio)
    CS-Studio is a user interface framework for control systems (EPICS, TANGO, TINE, ...) based on Eclipse RCP. Among the features are synoptic/archive/trend/alarm displays.
    Downloads: 21 This Week
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  • 17
    CStone

    CStone

    Short-read de novo assembler that identifies chimeric contigs.

    > CStone wiki: https://sourceforge.net/p/cstone/wiki/Home/ Related Software: 1. CStone: (See wiki) 2. CSReadGen: https://sourceforge.net/projects/csreadgen/ 3. CView: https://sourceforge.net/projects/cview/ 4. ChimSim: https://sourceforge.net/projects/chimsim/ 5. TVScript: https://sourceforge.net/projects/tvscript/ 6. SeQuester: https://sourceforge.net/projects/sequester/ 7. TreeScope: https://sourceforge.net/projects/treescope/
    Downloads: 0 This Week
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  • 18
    Linha do Texto is a web based game for classificate semiotic text content from user input data with 1 to 4 parameters predifined in each section. It can be used to discuss discrete and continuous semantic categories in a scientific and educational fied.
    Downloads: 0 This Week
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  • 19
    Toxtree: Toxic Hazard Estimation

    Toxtree: Toxic Hazard Estimation

    Toxicity prediction for chemical compounds

    A GUI application which estimates toxic hazard of chemical compounds. The latest version includes the following toxicity prediction modules: -Cramer rules (oral toxicity) -Toxicity mode of action via Verhaar scheme -Skin irritation and Eye irritation prediction -Benigni / Bossa rulebase for mutagenicity and carcinogenicity prediction -START biodegradation and persistence prediction -Skin sensitisation reactivity domain -Kroes TTC Decision tree -SMARTCyp - Cytochrome P450-Mediated...
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    Downloads: 214 This Week
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  • 20

    ADaMSoft

    Open Source and data mining software

    ADaMSoft is a free and Open Source Data Mining software developed in Java. It contains data management methods and it can create ready to use reports. It can read data from several sources and it can write the results in different formats.
    Downloads: 2 This Week
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  • 21
    TVscript

    TVscript

    Exploration of the removal of count variable transcripts.

    > See TVscript wiki: https://sourceforge.net/p/tvscript/wiki/Home/ Related Software: 1. CStone: https://sourceforge.net/projects/cstone/ 2. CSReadGen: https://sourceforge.net/projects/csreadgen/ 3. CView: https://sourceforge.net/projects/cview/ 4. ChimSim: https://sourceforge.net/projects/chimsim/ 5. TVScript: (See wiki) 6. SeQuester: https://sourceforge.net/projects/sequester/ 7. TreeScope: https://sourceforge.net/projects/treescope/
    Downloads: 0 This Week
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  • 22
    jfDataLogger

    jfDataLogger

    PLC Data Logger

    jfDataLogger ============ jfDataLogger can log data from PLC controllers. Supports Hardware: - Siemens S7-300/400 PLCs - AllenBradley (CompactLogic Controllers only) - ModBus IP protocol - National Instruments DAQmx System Features: - Trigger bit at start - Save/Load data set - Save Image - log to CSV Website: http://jfdatalogger.sourceforge.net
    Downloads: 3 This Week
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  • 23
    ScadaBR

    ScadaBR

    Open source SCADA

    We are now on GitHub: https://github.com/ScadaBR/ScadaBR ScadaBR is a SCADA (Supervisory Control and Data Acquisition) system with applications in Process Control and Automation, being developed and distributed using the open source model.
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    Downloads: 65 This Week
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  • 24
    Extensible Modeling and Simulation Framework (XMSF) using Web Services
    Downloads: 1 This Week
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  • 25
    aseryla

    aseryla

    Aseryla code repositories

    This project describes a model of how the semantic human memory represents the information relevant to the objects of the world in text format. It provides a system and a GUI application capable of extracting and managing concepts and relations from English texts. https://aseryla2.sourceforge.io/
    Downloads: 0 This Week
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