Splicing Prediction Pipeline or SPiP
Splicing Prediction in Consensus Element
R based pipeline for MHC-associated peptide proteomics (MAPPs) data
A pipeline to define allele-specific genomic features
City of Hope CpG Island Analysis Pipeline
The Modular Pipeline for the Analysis of CRISPR screens
An End-to-End Analysis Pipeline for BS-seq
IAP - the Integrated Analysis Pipeline
Non-Coding RNA PROfiling from sRNA-seq
Integrated pipeline for HT miRNA-Seq data analysis
A pipeline for quantitative proteomics based upon isobaric tags