Search Results for "visualization"
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Showing 48 open source projects for "visualization"
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ggstatsplot
Enhancing {ggplot2} plots with statistical analysis
{ggstatsplot} is an extension of {ggplot2} package for creating graphics with details from statistical tests included in the information-rich plots themselves. In a typical exploratory data analysis workflow, data visualization and statistical modeling are two different phases: visualization informs modeling, and modeling in its turn can suggest a different visualization method, and so on and so forth. Bayesian hypothesis-testing. The central idea of {ggstatsplot} is simple: combine these two phases into one in the form of graphics with statistical details, which makes data exploration simpler and faster. ... -
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FriendsDon'tLetFriends
Friends don't let friends make certain types of data visualization
Friends don't let friends make certain types of data visualization - What are they and why are they bad. -
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ggraph
Grammar of Graph Graphics
ggraph adapts the Grammar of Graphics from ggplot2 for network and graph visualizations. It integrates with tidygraph/igraph data structures, providing a wide range of geoms, layouts (e.g. hive plots, circle packing), and layering methods tailored to hierarchical or relational data. -
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ggplot2
An implementation of the Grammar of Graphics in R
ggplot2 is a system written in R for declaratively creating graphics. It is based on The Grammar of Graphics, which focuses on following a layered approach to describe and construct visualizations or graphics in a structured manner. With ggplot2 you simply provide the data, tell ggplot2 how to map variables to aesthetics, what graphical primitives to use, and it will take care of the rest. ggplot2 is over 10 years old and is used by hundreds of thousands of people all over the world for... -
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ggforce
Accelerating ggplot2
ggforce is an extension package for ggplot2 that introduces specialized statistical transforms, geoms, and layout utilities to enhance and complement the built-in ggplot2 offerings. It enables more advanced visualization techniques such as faceting enhancements, hulls, annotation marks, and novel layouts for network data and marked regions. -
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ggpubr
'ggplot2' Based Publication Ready Plots
ggpubr is an R package that provides easy-to-use wrapper functions around ggplot2 to create publication-ready visualizations with minimal code. It streamlines plot creation for researchers and analysts, allowing features such as statistical annotation, theme customization, and plot arrangement with fewer lines of code. -
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esquisse
RStudio add-in to make plots interactively with ggplot2
The purpose of this add-in is to let you explore your data quickly to extract the information they hold. You can create visualization with {ggplot2}, filter data with {dplyr} and retrieve generated code. This addin allows you to interactively explore your data by visualizing it with the ggplot2 package. It allows you to draw bar plots, curves, scatter plots, histograms, boxplot and sf objects, then export the graph or retrieve the code to reproduce the graph. -
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clusterProfiler
A universal enrichment tool for interpreting omics data
...It is designed for breadth, covering coding and non-coding features and thousands of organisms by leveraging continuously updated annotations. Results are returned in tidy, manipulation-friendly structures and pair naturally with rich visualization functions (via companion tooling) to summarize pathways, terms, and gene–set relationships. -
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Seurat
R toolkit for single cell genomics
Seurat is a comprehensive R toolkit for single-cell genomics analysis, introduced by the Satija Lab at NYGC. It supports quality control, normalization, clustering, integration of multimodal data (e.g., scRNA‑seq, spatial, CITE‑seq), and visualization. Seurat v5 introduces scalable workflows and spatial transcriptomics support, commonly used in academic and industry research for single-cell studies. -
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rayshader
R Package for 2D and 3D mapping and data visualization
This is an R package designed for producing beautiful and interactive 2D and 3D visualizations — especially maps and terrain renderings — using elevation/gridded data and ray-tracing / hill-shading methods. At its core, rayshader takes a matrix of elevations and applies shading, texture, ambient occlusion, overlays, and light modeling (ray shade, lambertian shading, etc.) to produce realistic relief maps. Users can rotate, zoom, and animate the scenes or script camera trajectories... -
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see
Visualisation toolbox for beautiful and publication-ready figures
see is an R package that serves as the visualization component of the easystats ecosystem, providing plotting utilities to produce publication-ready visualizations of statistical model parameters, diagnostics, predictions, and performance metrics. It works in conjunction with other easystats packages (such as parameters, performance, modelbased, bayestestR, etc.) to convert model outputs or summary objects into visual forms (dot-and-whisker plots, diagnostic plots, residual plots, etc.). ... -
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plotly
An interactive graphing library for R
This part of the book teaches you how to leverage the plotly R package to create a variety of interactive graphics. There are two main ways to creating a plotly object: either by transforming a ggplot2 object (via ggplotly()) into a plotly object or by directly initializing a plotly object with plot_ly()/plot_geo()/plot_mapbox(). Both approaches have somewhat complementary strengths and weaknesses, so it can pay off to learn both approaches. Moreover, both approaches are an implementation of... -
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gt R
Easily generate information-rich, publication-quality tables from R
With the gt package, anyone can make wonderful-looking tables using the R programming language. The gt philosophy: we can construct a wide variety of useful tables with a cohesive set of table parts. These include the table header, the stub, the column labels and spanner column labels, the table body, and the table footer. It all begins with table data (be it a tibble or a data frame). You then decide how to compose your gt table with the elements and formatting you need for the task at... -
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brms
brms R package for Bayesian generalized multivariate models using Stan
brms is an R package by Paul Bürkner which provides a high-level interface for fitting Bayesian multilevel (i.e. mixed effects) models, generalized linear / non-linear / multivariate models using Stan as the backend. It allows R users to specify complex Bayesian models using formula syntax similar to lme4 but with far more flexibility (distributions, link functions, hierarchical structure, nonlinear terms, etc.). It supports model diagnostics, posterior predictive checking, model comparison,... -
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forecast
Forecasting Functions for Time Series and Linear Models
The forecast package is a comprehensive R package for time series analysis and forecasting. It provides functions for building, assessing, and using univariate forecasting models (e.g. ARIMA, exponential smoothing, etc.), tools for automatic model selection, diagnostics, plotting, forecasting future values, etc. It's widely used in statistics, economics, business forecasting, environmental science, etc. Exponential smoothing state space models (ETS) including seasonal components. Residual... -
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JuliaConnectoR
A functionally oriented interface for calling Julia from R
This R-package provides a functionally oriented interface between R and Julia. The goal is to call functions from Julia packages directly as R functions. Julia functions imported via the JuliaConnectoR can accept and return R variables. It is also possible to pass R functions as arguments in place of Julia functions, which allows callbacks from Julia to R. From a technical perspective, R data structures are serialized with an optimized custom streaming format, sent to a (local) Julia TCP... -
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gganimate
A Grammar of Animated Graphics
gganimate extends the grammar of graphics as implemented by ggplot2 to include the description of animation. It does this by providing a range of new grammar classes that can be added to the plot object in order to customize how it should change with time. Here we take a simple boxplot of fuel consumption as a function of cylinders and let it transition between the number of gears available in the cars. As this is a discrete split (gear being best described as an ordered factor) we use... -
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NYC Taxi Data
Import public NYC taxi and for-hire vehicle (Uber, Lyft)
The nyc-taxi-data repository is a rich dataset and exploratory project around New York City taxi trip records. It collects and preprocesses large-scale trip datasets (fares, pickup/dropoff, timestamps, locations, passenger counts) to enable data analysis, modeling, and visualization efforts. The project includes scripts and notebooks for cleaning and filtering the raw data, memory-efficient processing for large CSV/Parquet files, and aggregation workflows (e.g. trips per hour, heatmaps of pickups/dropoffs). It also contains example analyses—spatial and temporal visualizations like maps, time-series plots, and hotspot detection—highlighting insights such as patterns of demand, peak times, and geospatial distributions. ... -
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ggrepel
epel overlapping text labels away from each other in your ggplot2
ggrepel is an R package that provides “smart” repulsion for text and label geoms in ggplot2. When placing text labels on a plot (e.g. labeling points), the labels can often overlap; ggrepel ensures labels don’t overlap (or overlap less) by repelling labels / pushing them away, adding connecting lines or nudges, etc. It improves the readability of plots, especially when many labels are present. Support for point and segment geoms (so labels can be connected by lines when moved). Supports both... -
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tidytext
Text mining using tidy tools
tidytext brings tidy data principles to text mining by converting text into a tidy data frame format. It provides tools for tokenization, sentiment analysis, n‑gram creation, and term‑document matrices, enabling interoperability with dplyr, ggplot2, and other tidyverse workflows. -
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easystats
The R easystats-project
easystats is a meta‑package that installs and unifies a suite of R packages for post‑processing statistical models. It delivers a consistent API to assess model performance, effect sizes, parameters, and to generate reports and visualizations, all with minimal dependencies and maximum clarity. -
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DiagrammeR
Graph and network visualization using tabular data in R
DiagrammeR is an R package to create, manipulate, and visualize network graphs, flowcharts, diagrams, and more using Graphviz and Mermaid syntax. Integrates with RMarkdown and Shiny apps, supports node/edge traversal, and graph analysis algorithms, making it ideal for documenting processes, causal relationships, or data pipelines. -
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caret
caret (Classification And Regression Training) R package
The caret (Classification And Regression Training) R package streamlines the process of building predictive machine learning models. It provides uniform interfaces for model training, tuning, evaluation, preprocessing, and variable importance. With support for over 200 models, caret is foundational for R workflows in modeling and machine learning. -
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RStudio Cheatsheets
Curated collection of official cheat sheets for data science tools
...The repository contains source files (R Markdown or LaTeX) that generate the cheat sheets, version history, and metadata (title, author, description) for each. It covers topics such as data wrangling, data import, modeling, visualization, RStudio IDE shortcuts, Shiny development, and the tidyverse suite (dplyr, ggplot2, tidyr, purrr). These cheat sheets are widely used by R learners, educators, and practitioners as quick reference tools, and they often ship with RStudio by default or are linked from RStudio’s help/documentation pages. Users can also contribute new cheat sheet proposals, corrections, or translations via pull requests. -
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MetBrewer
Color palette package inspired by Metropolitan Museum of Art in NY
MetBrewer is an R package that provides color palettes inspired by artworks and collections in the Metropolitan Museum of Art (The Met). The idea is to draw on the rich visual heritage of fine art to generate palettes that are aesthetically pleasing and grounded in real-world artistic color usage. The palettes are curated, named after artworks or styles, and often include notes about colorblind-friendliness and contrast. The package supports both discrete and continuous palette types, with...