Search Results for "bayesian"
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Showing 41 open source projects for "bayesian"
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Bayesian Optimization
Python implementation of global optimization with gaussian processes
This is a constrained global optimization package built upon bayesian inference and gaussian process, that attempts to find the maximum value of an unknown function in as few iterations as possible. This technique is particularly suited for optimization of high cost functions, situations where the balance between exploration and exploitation is important. More detailed information, other advanced features, and tips on usage/implementation can be found in the examples folder. -
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Think Bayes 2
Text and code for the second edition of Think Bayes, by Allen Downey
Think Bayes 2 is the companion repository for the second edition of Allen B. Downey’s introduction to Bayesian statistics. It teaches Bayesian reasoning through computational methods instead of relying mainly on symbolic mathematics. Each chapter is presented as a Jupyter notebook where readers can study the text, run examples, and complete exercises. Separate solution materials help learners check their work and explore alternative approaches. -
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PyMC
Bayesian Modeling and Probabilistic Programming in Python
PyMC is a Python library for probabilistic programming focused on Bayesian statistical modeling and machine learning. Built on top of computational tools like Aesara and NumPy, PyMC allows users to define models using intuitive syntax and perform inference using MCMC, variational inference, and other advanced algorithms. It’s widely used in scientific research, data science, and decision modeling. -
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OpenOutreach
Linkedin Automation Tool
...The system generates search queries, evaluates candidate profiles, and learns over time which contacts best match the ideal customer profile. According to the repository, it combines large language model classification with a Bayesian machine learning layer based on profile embeddings, which helps it shift from broad exploration to more confident qualification as it gathers more decisions. It is designed to automate personalized outreach as well, including connection requests and follow-up messaging, while keeping deployment under the user’s control through a local or self-hosted setup. -
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Meridian
Meridian is an MMM framework
Meridian is a comprehensive, open source marketing mix modeling (MMM) framework developed by Google to help advertisers analyze and optimize the impact of their marketing investments. Built on Bayesian causal inference principles, Meridian enables organizations to evaluate how different marketing channels influence key performance indicators (KPIs) such as revenue or conversions while accounting for external factors like seasonality or economic trends. The framework provides a robust foundation for constructing in-house MMM pipelines capable of handling both national and geo-level data, with built-in support for calibration using experimental data or prior knowledge. ... -
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Nevergrad
A Python toolbox for performing gradient-free optimization
...The library provides an easy interface to define an optimization problem (parameter space, loss function, budget) and then experiment with multiple strategies—evolutionary algorithms, Bayesian optimization, bandit methods, genetic algorithms, etc. Nevergrad supports parallelization, budget scheduling, and multiple cost/resource constraints, allowing it to scale to nontrivial optimization problems. It includes visualization tools and diagnostic metrics to compare strategy performance, track parameter evolution, and detect stagnation. -
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BayesianOptimization
A Python implementation of global optimization with gaussian processes
BayesianOptimization is a Python library that helps find the maximum (or minimum) of expensive or unknown objective functions using Bayesian optimization. This technique is especially useful for hyperparameter tuning in machine learning, where evaluating the objective function is costly. The library provides an easy-to-use API for defining bounds and optimizing over parameter spaces using probabilistic models like Gaussian Processes. -
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KerasTuner
A Hyperparameter Tuning Library for Keras
...Easily configure your search space with a define-by-run syntax, then leverage one of the available search algorithms to find the best hyperparameter values for your models. KerasTuner comes with Bayesian Optimization, Hyperband, and Random Search algorithms built-in, and is also designed to be easy for researchers to extend in order to experiment with new search algorithms. -
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Implicit
Fast Python collaborative filtering for implicit feedback datasets
This project provides fast Python implementations of several different popular recommendation algorithms for implicit feedback datasets. All models have multi-threaded training routines, using Cython and OpenMP to fit the models in parallel among all available CPU cores. In addition, the ALS and BPR models both have custom CUDA kernels - enabling fitting on compatible GPU’s. This library also supports using approximate nearest neighbour libraries such as Annoy, NMSLIB and Faiss for speeding... -
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PyMC3
Probabilistic programming in Python
...Fit your model using gradient-based MCMC algorithms like NUTS, using ADVI for fast approximate inference — including minibatch-ADVI for scaling to large datasets, or using Gaussian processes to build Bayesian nonparametric models. PyMC3 includes a comprehensive set of pre-defined statistical distributions that can be used as model building blocks. Sometimes an unknown parameter or variable in a model is not a scalar value or a fixed-length vector, but a function. A Gaussian process (GP) can be used as a prior probability distribution whose support is over the space of continuous functions. ... -
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pomegranate
Fast, flexible and easy to use probabilistic modelling in Python
...The modular implementation allows one to easily drop normal distributions into a mixture model to create a Gaussian mixture model just as easily as dropping a gamma and a Poisson distribution into a mixture model to create a heterogeneous mixture. But that's not all! Because each model is treated as a probability distribution, Bayesian networks can be dropped into a mixture just as easily as a normal distribution, and hidden Markov models can be dropped into Bayes classifiers to make a classifier over sequences. Together, these two design choices enable a flexibility not seen in any other probabilistic modeling package. -
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Pyro
Deep universal probabilistic programming with Python and PyTorch
Pyro is a flexible, universal probabilistic programming language (PPL) built on PyTorch. It allows for expressive deep probabilistic modeling, combining the best of modern deep learning and Bayesian modeling. Pyro is centered on four main principles: Universal, Scalable, Minimal and Flexible. Pyro is universal in that it can represent any computable probability distribution. It scales easily to large datasets with minimal overhead, and has a small yet powerful core of composable abstractions that make it both agile and maintainable. ... -
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Neural Tangents
Fast and Easy Infinite Neural Networks in Python
Neural Tangents is a high-level neural network API for specifying complex, hierarchical models at both finite and infinite width, built in Python on top of JAX and XLA. It lets researchers define architectures from familiar building blocks—convolutions, pooling, residual connections, and nonlinearities—and obtain not only the finite network but also the corresponding Gaussian Process (GP) kernel of its infinite-width limit. With a single specification, you can compute NNGP and NTK kernels,... -
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CausalNex
A Python library that helps data scientists to infer causation
CausalNex is a Python library that uses Bayesian Networks to combine machine learning and domain expertise for causal reasoning. You can use CausalNex to uncover structural relationships in your data, learn complex distributions, and observe the effect of potential interventions. -
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auto-sklearn
Automated machine learning with scikit-learn
auto-sklearn is an automated machine learning toolkit and a drop-in replacement for a scikit-learn estimator. auto-sklearn frees a machine learning user from algorithm selection and hyperparameter tuning. It leverages recent advantages in Bayesian optimization, meta-learning and ensemble construction. Auto-sklearn 2.0 includes latest research on automatically configuring the AutoML system itself and contains a multitude of improvements which speed up the fitting the AutoML system. auto-sklearn 2.0 works the same way as regular auto-sklearn. auto-sklearn is licensed the same way as scikit-learn, namely the 3-clause BSD license. -
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Machine-Learning
kNN, decision tree, Bayesian, logistic regression, SVM
Machine-Learning is a repository focused on practical machine learning implementations in Python, covering classic algorithms like k-Nearest Neighbors, decision trees, naive Bayes, logistic regression, support vector machines, linear and tree-based regressions, and likely corresponding code examples and documentation. It targets learners or practitioners who want to understand and implement ML algorithms from scratch or via standard libraries, gaining hands-on experience rather than relying... -
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Bayesian machine learning notebooks
Notebooks about Bayesian methods for machine learning
Notebooks about Bayesian methods for machine learning. -
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Think Bayes
Code repository for Think Bayes
ThinkBayes is the code repository accompanying Think Bayes: a book on Bayesian statistics written in a computational style. Instead of heavy focus on continuous mathematics or calculus, the book emphasizes learning Bayesian inference by writing Python programs. The project includes code examples, scripts, and environments that correspond to the chapters of the book. Learners can run the code, experiment with probability distributions, compute posterior probabilities, and understand Bayesian updating via simulation and algorithmic methods. ... -
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DEBay
Deconvolutes qPCR data to estimate cell-type-specific gene expression
DEBay: Deconvolution of Ensemble through Bayes-approach DEBay estimates cell type-specific gene expression by deconvolution of quantitative PCR data of a mixed population. It will be useful in experiments where the segregation of different cell types in a sample is arduous, but the proportion of different cell types in the sample can be measured. DEBay uses the population distribution data and the qPCR data to calculate the relative expression of the target gene in different cell types in... -
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Deep Learning Drizzle
Drench yourself in Deep Learning, Reinforcement Learning
Drench yourself in Deep Learning, Reinforcement Learning, Machine Learning, Computer Vision, and NLP by learning from these exciting lectures! Optimization courses which form the foundation for ML, DL, RL. Computer Vision courses which are DL & ML heavy. Speech recognition courses which are DL heavy. Structured Courses on Geometric, Graph Neural Networks. Section on Autonomous Vehicles. Section on Computer Graphics with ML/DL focus. -
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BATS
Bayesian Adaptive Trial Simulator
A user-friendly, quick simulator for Bayesian Multi-Arm Multi-Stage Trials -
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BayesRate
Bayesian estimation of diversification rates
BayesRate is a program to estimate speciation and extinction rates from dated phylogenies in a Bayesian framework. The methods are described in: Silvestro, D., Schnitzler, J. and Zizka, G. (2011) A Bayesian framework to estimate diversification rates and their variation through time and space. BMC Evolutionary Biology, 11, 311 Silvestro D., Zizka G. & Schulte K. (2014) Disentangling the effects of key innovations on the diversification of Bromelioideae (Bromeliaceae). ... -
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Pyclamp
A Python package used to extract and analyse electrophysiological data
...Presently, Pyclamp is designed to perform very specific forms of analysis on evoked synaptic responses: Data analysis (under development) : This is a highly user-interactive en-vironment that can be used to discriminate synaptic events, obtain various measures of their kinetics and size, and output the results. Quantal analysis : This part of the package performs simple variance-mean analysis and Bayesian quantal analysis to estimate the quantal sizea dn number of release sites among other measures. -
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PyRate
Bayesian Estimation of Speciation and Extinction from Fossil Data
PyRate is a Python program to estimate speciation, extinction, and preservation rates from fossil occurrence data using a Bayesian framework. The method was described by D Silvestro, J Schnitzler, LH Liow, A Antonelli, and N Salamin in Systematic Biology (http://sysbio.oxfordjournals.org/content/early/2014/02/08/sysbio.syu006.abstract). *Please download the most up-to-date code from the "PyRate code" tab on this page or from: https://github.com/dsilvestro/PyRate * *An updated manual can be found here: https://github.com/dsilvestro/PyRate/tree/master/tutorials * -
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RadicalSpam Virtual Appliance
Virtual Appliance of RadicalSpam
RadicalSpam Virtual Appliance takes full solution of RadicalSpam Community Edition , pre-installed in a OVF virtual machine ( Open Virtual Format ) compatible with the best virtualization platforms on the market , including VMware ESX Server. More information : http://www.radical-spam.org
