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CellPublisher is a free, open source program to improve the navigation of biological pathways. It converts CellDesigner diagrams into fully-featured maps that live inside a browser. The navigation is based on the Google maps API.
Distributed Parallel Programming for Python! This package builds on traditional Python by enabling users to write distributed, parallel programs based on MPI message passing primitives. General python objects can be messaged between processors. Ru
SynBioLib -- your toolkit for synthetic biology applications. SynBioLib aims to establish a platform on which the Synthetic Biology community can develop and share code that is common to many tasks and programs.
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this project provides a Glue to Access GOFER Functionality through C and Python.
Gofer ("Good For Equational Reasoning") is an implementation of the programming language Haskell intended for educational purposes and supporting a language based
Data mines the voting record and other actions of Members of the UK Parliament. Extracts information from the parliament website and stores it in a database. Provides tools to analyse the information, producing statistics and tables about the MPs.
ngram is a module to compute the similarity between two strings. It is different to python's "difflib.SequenceMatcher" in that it cares more about the size of both strings. ngram is an port and extension of the perl module called "String::Trigram
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Metropolis is a visualization tool for TRANSIMS traffic simulation output. It specializes in viewing the dynamic outputs of the micro-simulator, such as vehicle motion and other time-varying data.
RefineHMM refines an original hidden Markov model (HMM) to find an optimal fit
against the evolutionary group that the HMM models, and it does this using
through iterative database searches and incremental subsequent adaptation of
the seed set.
BS Eagle Project is an open source black-oil simulator. The goal of this project is to provide a free access to the modern oil simulator to study new methods of simulation. The project has a modular architecture and open to modifications and extensions.
This is a set of Python classes that can be used to simulate dynamic multi-body systems. It used to be a project for studies. Now it is not being worked on anymore, but it is completely GPLized.
Bender is a project intented to cover a complete UAVs system. The projects consists in three parts: the UAV Embedded software (Bender), the Control station software (Fry) and the communication protocol between UAVs and Control Station
PyCV is a Python package of modules useful for computer vision tasks. Its current focus is on boosting techniques, Haar-like features, and face detection. PyCV provides the world's fastest method for training a face detector, in a few hours.
ATpy (Astronomical Tables in Python) is a Python module aimed at dealing with tables of astronomical data with a common API. To date, the following formats are supported: FITS, VO, and IPAC tables, and SQLite, MySQL, and PostgreSQL databases
This project contains tools, that were created during the work with the Katana robotic manipulator at the workgroup EOS of the University of Magdeburg.
A Python environment for large and sparse linear and nonlinear optimization using intuitive interfaces to linear algebra tools and subproblem solvers written in low-level languages. It provides building blocks to experiment with new ideas and algorithms.
OpenDWS is a hobby project to create a datawarehousing suite that: - Can work on different OS - Federates databases - Can run Data analyses using plugins on different databases This project is programmed in Python Language.