Search Results for "data structure" - Page 7
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Showing 193 open source projects for "data structure"
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Algorithms in Python
Data Structures and Algorithms in Python
Algorithms in Python is a collection of algorithm and data structure implementations (primarily in Python) meant to serve as both learning material and reference code for engineers. It includes code for graph algorithms, heap data structures, stacks, queues, and more — each implemented cleanly so learners can trace logic and adapt for their problems. The repository is particularly useful for people preparing for competitive programming, job interviews, or building a foundational understanding of algorithmic patterns. ... -
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dpanalyzer
postprocessing tool for Project Gutenberg Distributed Proofreaders
Specialized tool for PostProcessors of books produced by Project Gutenberg Distributed Proofreaders. Parses the markup structure of a project file out of the formatting rounds; reports about the text structure found, and identifies markup errors. Planned future features: generation of normalized dp output by rejoining split paragraphs and moving around footnotes, renumbering of pages; conversion to basic LaTeX and basic HTML markup for further processing. -
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Py3DN
Morphometric analysis and visualization of the 3D structure of neurons
...The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data. Py3DN is described in the paper: Aguiar P et al, "Versatile morphometric analysis and visualization of the three-dimensional structure of neurons", Neuroinformatics, 2013, 11(4):393-403 doi: 10.1007/s12021-013-9188-z -
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nogotofail
An on-path blackbox network traffic security testing tool
...The system’s flexible architecture supports automated testing at scale, making it suitable for both single-device assessments and large network evaluations. Its modular structure also allows for customization and extension, enabling researchers to target specific network behaviors or encryption flaws. -
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Stingray - Schema-Based File Reader
Simple handling of numerous data file formats, even COBOL EBCDIC.
Stingray contains a number of components for reading spreadsheets and other flat files. It copes with COBOL files (in EBCDIC) and even COBOL Copybook (or DDE) definitions. Simple Python programs can handle a wide variety of files. This is the Python3.3 release. -
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eSBMTools
python tools for enhanced native structure-based modeling
eSBMTools: python tools that assist the setup and evaluation of native structure-based simulations of proteins and nucleic acids, both at the Cα and all-atom level. The tools interface with GROMACS and support its standard output formats. Information from other sources like bioinformatics or experimental data can be added to the standard native structure-based model (SBM). Publication to be cited: Benjamin Lutz, Claude Sinner, Geertje Heuermann, Abhinav Verma, and Alexander Schug. eSBMTools 1.0: enhanced native structure-based modeling tools. ... -
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Analyzer for Files
A tool to look into file contents
Analyzer for Files (AoF) is a tool to look into file contents, analyze the structure with installed plug-ins, and show the results with several split windows including converted data and a tree if successful. It was designed as a workbench with a core and plug-in extensions. It can handle the normal plain-text file and data, complex binaries supported with the corresponding plug-ins. What's more, the developers can deploy and release their own plug-ins according to the plug-in developing standard. ... -
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PangView
Text Viewer that displays text similar to pango
...The parser reads pango tags similar to html. The utility was written, so formatted text can be displayed quickly. NEW! The parser now is updated to use a faster method of internal data structure. -
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NanoCap
Carbon Fullerene and Capped Nanotube Generator
NanoCap is a generic application for the construction of low energy fullerene and capped nanotube structures. It provides an ideal tool to accompany the study of finite carbon molecules using computer simulation. The implementation involves a standalone application which includes a GUI and allows for dynamic visual inspection through 3D rendering. In addition, the NanoCap core libraries can be used in custom Python scripts that enabled the user to produce structures in bulk or to include the... -
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xPyder PyMOL Plugin
Analyze and visualize coupled residues and their networks in proteins
xPyder is a PyMOL plugin to analyze and visualize on the 3D structure dynamical cross-correlation matrices (DCCM), linear mutual information (LMI), communication propensities (CP), intra- and inter-molecular interactions (e.g. PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level. -
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Importer library to import assets from different common 3D file formats such as Collada, Blend, Obj, X, 3DS, LWO, MD5, MD2, MD3, MDL, MS3D and a lot of other formats. The data is stored in an own in-memory data-format, which can be easily processed. www.open3mod.com/ is a 3D model viewer and exporter based on Assimp that is also Open Source.
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File based backup 52
Content Based File level Data Backup in Python
Content Based File level Data Backup in Python. This is a utility to backup your files. It can do full and incremental backups. It will take a directory as input, and will back up the files in that folder and all sub-folders to the backup destination directory. It can compress each file individually while backing-up. Mirrors the source directory structure under the target directory. -
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Infrastructure for creating document flow solutions, document forms, document printing forms. Automated data structure creation and modufication. Basic shems for store managment, accounting and other document flow tasks.
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ProximityForest
Efficient Approximate Nearest Neighbors for General Metric Spaces
A proximity forest is a data structure that allows for efficient computation of approximate nearest neighbors of arbitrary data elements in a metric space. See: O'Hara and Draper, "Are You Using the Right Approximate Nearest Neighbor Algorithm?", WACV 2013 (best student paper award). One application of a ProximityForest is given in the following CVPR publication: Stephen O'Hara and Bruce A. -
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allink
Software for data analysis, image processing, simulations, solver.
Collection of utilities based on two basics classes: Matematica and VarData. Matematica) performs math operations on vectors and matrices for smoothing, interpolation, convolution, image processing... VarData) manipulate a structure of points connected by links. Addraw) openGL engine. ElPoly) analyze mechanical properties of polymer and membrane like structures. Addyn) perform molecular dynamics and Monte Carlo simulations and has a solver for 4th oder PDE. Avvis) perform all the operation of Matematica on different sets of data visualized on a Qt graphical interface. ... -
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Hierarchical cluster engine HCE
Hierarchical Cluster Engine project
The main idea of this project – to implement the solution that can be used to: construct custom network mesh or distributed network cluster structure with several relations types between nodes, formalize the data flow processing goes from upper node level central source point to down nodes and backward, formalize the management requests handling from multiple source points, support native reducing of multiple nodes results (aggregation, duplicates elimination, sorting and so on), internally support powerful full-text search engine and data storage, provide transactions-less and transactional requests processing, support flexible run-time changes of cluster infrastructure, have many languages bindings for client-side integration APIs in one product build on C++ language... ... -
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nacho
Python micro web-framework and asynchronous networking library
...Because it encourages consistency among services, teams can spin up new microservices with a shared structure and skip repetitive setup. Though the repository may be less active than some major frameworks, it serves as a valuable jump-start for projects where speed and uniformity matter. -
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Construct is a python module for bit-level, symmetrical parsing and building of data structures. Complex constructs are formed by a hierarchy of less-complex constructs, as well as user-defined constructs.
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CAPLET
GDS visualization and parallelized capacitance extraction
Project CAPLET is a capacitance extraction toolkit that extract capacitance at field-solver accuracy. CAPLET can directly handle GDS2 layout files into capacitance matrices in both GUI and command line interfaces. The internal extraction algorithm is specialized for VLSI interconnect structures but not exclusively, as long as the structure is of Manhattan geometry and embedded in a uniform dielectric material. -
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Multi File Fuzzer
Multi File Fuzzer aims to facilitate the discovery of vulnerability
Multi File Fuzzer aims to facilitate the discovery of vulnerability "FileFormat" in applications. Multi File Fuzzer keeps the structure of the format while injecting corrupted data to try to crash the target application. -
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YEI 3-Space Python API
A Python API for interfacing with the YEI 3-Space family.of IMUs.
The YEI 3-Space Sensor Application Programming Interface (API) is a series of functions, classes, and structure definitions designed to make writing applications that utilize the YEI 3-Space family of sensors fast and easy to support. The included module and support files handles message formatting, serialization of commands, conversion of return data to friendly data types, and 3-Space unit management. -
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NLOPredict is a nonlinear optical prediction and data analysis tool. Nonlinear optical measurements can yield information about the structure of crystals, and orientation of molecules at surfaces and interfaces.
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DataFinder is a data management client developed in Python that primarily targets the management of scientific technical data. The system is able to handle large amounts of data and can be easily integrated in existing working environments.
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PySpline is a graphical, cross-platform program for processing X-ray absorption spectroscopy (XAS) and Extended X-ray absorption fine structure (EXAFS) data. It allows processing parameters to be adjusted and observe the effect on R-space data.
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This project aims to create a Python SQLite based data offline/online analytics program targetted mainly on web analytics. The main development would involve a complete python powered (C/C++ intermediate wrappers if required) sqlite analysis engine.
