Search Results for "raw" - Page 6
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Showing 186 open source projects for "raw"
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1
cocoNLP
A Chinese information extraction tool
cocoNLP is a lightweight natural-language processing toolkit geared toward practical information extraction from raw text, especially for Chinese and mixed Chinese–English content. Instead of requiring a heavy pipeline, it focuses on quick wins such as extracting names, places, organizations, emails, phone numbers, and dates directly from unstructured sentences. The project blends pattern-based methods with NLP heuristics, giving developers dependable results for real-world texts like chats, comments, and user-generated content. ... -
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PyTorch pretrained BigGAN
PyTorch implementation of BigGAN with pretrained weights
...This PyTorch implementation of BigGAN is provided with the pretrained 128x128, 256x256 and 512x512 models by DeepMind. We also provide the scripts used to download and convert these models from the TensorFlow Hub models. This reimplementation was done from the raw computation graph of the Tensorflow version and behave similarly to the TensorFlow version (variance of the output difference of the order of 1e-5). This implementation currently only contains the generator as the weights of the discriminator were not released (although the structure of the discriminator is very similar to the generator so it could be added pretty easily. -
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plot.py
direct data plotting and evaluation
The Plot.py project tries to supply a measurement data visualization and treatment framework being easy to use while keeping the freedom for advanced users to execute additional data treatment algorithms. Plotting is done via gnuplot and the script used to produce the graphs can be exported for later use/changes. Many raw experimental data types (mostly of x-ray and neutron scattering experiments) are supported with more to be added on user request. The data treatment includes non-linear fitting, integration and differentiation, peak-finder and more. User python code can be executed in the integrated IPython console. -
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Tacotron-2
DeepMind's Tacotron-2 Tensorflow implementation
Tacotron-2 is a TensorFlow implementation of DeepMind’s Tacotron-2 end-to-end text-to-speech architecture, which predicts mel spectrograms from raw text and then feeds them to a neural vocoder such as WaveNet. It reproduces the original paper’s hyperparameters exactly via paper_hparams.py, while also offering a tuned hparams.py with extra improvements that often yield better audio quality in practice. The repository is structured as a full training pipeline: dataset preparation, preprocessing into spectrograms, Tacotron training, WaveNet (or Griffin-Lim) vocoder training, and final waveform synthesis. ... -
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Exposure
Learning infinite-resolution image processing with GAN and RL
Learning infinite-resolution image processing with GAN and RL from unpaired image datasets, using a differentiable photo editing model. ACM Transactions on Graphics (presented at SIGGRAPH 2018) Exposure is originally designed for RAW photos, which assumes 12+ bit color depth and linear "RGB" color space (or whatever we get after demosaicing). jpg and png images typically have only 8-bit color depth (except 16-bit pngs) and the lack of information (dynamic range/activation resolution) may lead to suboptimal results such as posterization. Moreover, jpg and most pngs assume an sRGB color space, which contains a roughly 1/2.2 Gamma correction, making the data distribution different from training images (which are linear). ... -
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PPLine
SNP calling, annotation and gene/transcripts expression quantification
PPLine is a Python-based suite aimed to process raw RNA-seq or Exome-seq data. PPLine provides: - read mapping (STAR/Tophat2/bowtie/bowtie2), including novel splice junsctions discovery - gene and transcript expression estimation (HTSeq-count/Cufflinks) - SNP calling with BQSR and indel realignment (samtools/GATK) - variant annotation (Annovar) - novel transcripts discovery (Cufflinks) - predicting proteotypic peptides and creating ref/alt proteins fasta-database - integration of the results -
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Rekall
Rekall Memory Forensic Framework
Rekall is a powerful memory forensics framework that turns raw RAM captures—or live system state—into structured artifacts investigators can query and script. It ships with a large collection of plugins that parse OS internals to recover processes, modules, sockets, registry hives, and file objects, even when rootkits try to hide them. The design emphasizes repeatability: investigators run well-defined analyses that produce timelines, indicators, and reports suitable for case work or automation. ... -
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Five video classification methods
Code that accompanies my blog post outlining five video classification
...So a 41-frame video and a 500-frame video will both be reduced to 40 frames, with the 500-frame video essentially being fast-forwarded. We won’t do much preprocessing. A common preprocessing step for video classification is subtracting the mean, but we’ll keep the frames pretty raw from start to finish. -
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WikiSQL
A large annotated semantic parsing corpus for developing NL interfaces
A large crowd-sourced dataset for developing natural language interfaces for relational databases. WikiSQL is the dataset released along with our work Seq2SQL: Generating Structured Queries from Natural Language using Reinforcement Learning. Regarding tokenization and Stanza, when WikiSQL was written 3-years ago, it relied on Stanza, a CoreNLP python wrapper that has since been deprecated. If you'd still like to use the tokenizer, please use the docker image. We do not anticipate switching... -
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10
DeID Tool
De-Identification tool to remove sensitive data
This tool converts pipe separated text data into a csv file and also removes all the patient related sensitive data. It takes raw data as input from a text file and process the data thereby, generates a csv file. -
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wirecutter plugin for inkscape
This plugin exports G-Code for a wirecutter
...You can either draw one open path which is the path which the machine will cut or you can draw some closed paths. These closed paths (e.g. Letters) must be connected because the cutter cannot leave the raw material like a milling machine. The Plugin helps you to create these connectors. If you have a wirecutter with a turning table you can create multiple "cuts" for different positions of the turning table. This software is not really tested and is still in development. -
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Leave A Trace Tools
Tools for reading the track data of the project "Leave a Trace"
...It is installed as a permanent exhibition within the Charité in Berlin, Germany. Please find more Details about LAT here: https://leave-a-trace.charite.de/action This sourceforge project provides python tools to read the raw XML data produced by LAT. The data reading module works with python2 and python3. LAT XML Data can be downloaded here: https://leave-a-trace.charite.de/action/xml_dateien_der_traces/ ## Visualization tool: This project also contains a GUI-based visualization tool, which allows creation of custom vector data (SVG) from the given LAT data. ... -
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Fielddata Mgr
Land survey field crew data management for .RAW and .JOB file types.
...The program "Fielddata Mgr", is customized for the Rick survey department, in such that it supports up to 9 chiefs, each having their own folder in one location, 2 supervisers, each with a PC on the network, and access to a main server. Each day, the .RAW file is copied to the appropriate chiefs folder and when Fielddata Mgr is run, or the reload button is clicked, all .RAW files are listed along with a long list of all job folders existing in a designated location, and a short list of frequently accessed jobs that are selected from within the long list. When a .RAW file is selected, the contents are read, interpreted, and the results displayed within the program window. ... -
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lxnstack
A program to align and stack astronomical images.
... * FITS file support (by installing the python2 package 'astropy') * Hot pixels suppression algorithm * CR2 files native support * Can load/save video * Grayscale RAW image support * Editing of result image's levels. * Light curve generation -
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Py3DN
Morphometric analysis and visualization of the 3D structure of neurons
...Above all, it provides a flexible environment where new types of analyses can be easily set up allowing total freedom to test new hypotheses. The application was developed in Python and uses Blender (an open source program) to produce detailed 3D representations of raw and processed data. Py3DN is described in the paper: Aguiar P et al, "Versatile morphometric analysis and visualization of the three-dimensional structure of neurons", Neuroinformatics, 2013, 11(4):393-403 doi: 10.1007/s12021-013-9188-z -
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This program written in Python is used for capture screenshot or raw data from a UNI-T digital storage oscilloscope.
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ncPRO-seq
Non-Coding RNA PROfiling from sRNA-seq
ncPRO-seq is a tool for annotation and profiling of ncRNAs from smallRNA sequencing data. It aims to interrogate and perform detailed analysis on small RNAs derived from annotated non-coding regions in miRBase, piRBase, Rfam and repeatMasker, and regions defined by users. The ncPRO pipeline also has a module to identify regions significantly enriched with short reads that can not be classified as known ncRNA families. ############# Docker version : download and run Dockerfile (go in... -
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pyQPCR is a GUI application written in python that deals with quantitative PCR (QPCR) raw data. Using quantification cycle values extracted from QPCR instruments, it uses a proven and universally applicable model to give finalized quantification resu
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LaTeX Helper
GUI to help create a LaTeX document
This GUI lets the user navigate a wide selection of LaTeX structure and formatting tags that are used to write a document in LaTeX. It also has a raw text input box with a LaTeX preview for testing out LaTeX markup. Also, each markup has associated help text and is automatically selected to be ready to paste into the user's text editor. Also, this GUI lets the user choose which text editor and supporting programs are used to create their LaTeX document instead of forcing them into a particular interface of a pre-defined IDE. -
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anontwi
AnonTwi: tool to have more privacy on social networking sites related
AnonTwi provides you: + AES + HMAC-SHA1 encryption on Tweets and Direct Messages + Secure Sockets Layer (SSL) to interact with API + Proxy Socks (for example, to connect to the TOR network) + Random HTTP header values + Send long messages splitted automatically + Automatic decryption of tweet's urls or raw inputs + Backup messages to your disk (max: 3200) + Send fake geolocation places + Remove data and close account (suicide!) + View global Trending Topics + UTF-8 + Unicode support (chinese, arabic, symbols, etc) + Multiplatform: GNU/Linux, MacOS, Win32 + Detailed colourful output results + Generate tools and modules + GTK+ interface + An IRC bot slave + [...] ... -
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QuickNXS
Polarized ToF reflectivity raw data analysis tool
Data evaluation tool for the magnetism reflectometer at the spallation neutron source (BL-4A@SNS). Reads raw nexus files (HDF5) of histogrammed or event mode data to create reflectivity curves and 2D Q-maps. -
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superboucle
Loop based software with jack transport, record and midi controllable
...Sample will always start and stop on a beat or group of beats. You can adjust duration of sample (loop period) in beat and offset in beat. But you can also adjust sample offset in raw frame count negative or positive. Which mean sample can start before next beat (useful for reversed sample). You can record loop of any size, adjust BPM, reverse, normalize samples, ... Typical usage : * You need to control jack transport with external midi device and want a button to jump to a specified location in song. * You have some instruments patterns but you have no idea of song structure... -
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This script can convert raw diffraction images to JPEG files. Support ADSC, MarCCD, Mar345, RAXIS and PILATUS, and can be run on Windows, Linux and Mac OS X.
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Little Server That Can
LSTC is a plugin server in Python.
...It's also designed in a way that you can connect to different "plugins" allowing one person to play chat and another to play a multiplayer game without either of the projects interfering with the other. With a little modification (of the parsing and sending messages), you can use it with raw sockets for other projects made outside of Scratch. -
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mitoMaker
mitoMaker - a mitochondria assembly and annotation script
mitoMaker is a pipeline script developed to simplify the assembly and automatic annotation of mitochondrial genomes, based on raw NGS reads and an optional target reference. mitoMaker calls well known assemblers and algorithms, such as SOAPdenovo, MIRA and blast+ and parses their results providing easily readable outputs, such as FASTA, GENBANK, SEQUIN, PNG and others. General pipeline: 1-iterative De Novo assembly, with different k-mer values, trying to assemble a build that matches a target mitochondrial genome given. 2-searches for all mitochondrial gene features and circularization. 3-stores the best result found. 4-uses the best assembly as backbone for a reference based assembly, using MIRA and MITObim, trying to extend the mitogenome and close gaps. 5-annotates the best assembly, identifying the start and end position of each and every feature. 6-creates a folder with all the results (PNG, GENBANK, FASTA, SEQUIN, CAF, MAF and a stats logfile).
