Search Results for "data bin 6" - Page 4
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Showing 103 open source projects for "data bin 6"
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Stingray - Schema-Based File Reader
Simple handling of numerous data file formats, even COBOL EBCDIC.
Stingray contains a number of components for reading spreadsheets and other flat files. It copes with COBOL files (in EBCDIC) and even COBOL Copybook (or DDE) definitions. Simple Python programs can handle a wide variety of files. This is the Python3.3 release. -
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ExAM-Exome_Analysis_And_Mining
A whole exome sequencing analysis package and its graphical interface
During the past few years, whole exome sequencing has imposed itself for genetic research, largely due to its use for detection of causative mutations responsible for Mendelian disorders. As a consequence of their power and of the rapidly decreasing cost of these technologies, massive amount of exome sequencing data are generated and becoming available to a broadening community of scientists. However, these data remain difficult to analyze and interpret by the general scientific community,... -
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WxBinTerminal
Serial Com Terminal for Hexadecimal, decimal, or ascii formats
wxBinTerm, a binary serial terminal ------------------------------------------------------------------ V1.0.0 initial release, ... This serial terminal is initially made to send parameters to Reiner Serial Printer JetStamp 791. It is able to send data in HexaDecimal/Decimal/ASCII format on serial com port. you can use it for anythink else. you can add/change some presetted commands modifying wxBinTermCommands.py dictionnary written in python 2.7.9 :... -
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Admin UI for a Field Observation Server
Vbox machine for server_admin
Administrative User Interface for a Field Observation Server: It's a administrative web app built with Django for storing citizen science data and has support for uploading the collected data to an RESTful archive server. It has features including (1) registration of contributors; (2) a new GUI to allow scientists with minimal computer knowledge to add, sort, and delete observations; (3) support for uploading a photo to a specific observation; (4) support for displaying GPS information in a map field; (5) support for validating the correctness of the format of the observation data; (6) support for uploading a selected subset of observation data via Internet to a private server for preservation. ... -
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eSBMTools
python tools for enhanced native structure-based modeling
eSBMTools: python tools that assist the setup and evaluation of native structure-based simulations of proteins and nucleic acids, both at the Cα and all-atom level. The tools interface with GROMACS and support its standard output formats. Information from other sources like bioinformatics or experimental data can be added to the standard native structure-based model (SBM). Publication to be cited: Benjamin Lutz, Claude Sinner, Geertje Heuermann, Abhinav Verma, and Alexander Schug. eSBMTools 1.0: enhanced native structure-based modeling tools. Bioinformatics 29(21):2795-6, November 2013 -
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XMIPP is an image processing suite for 3D-reconstruction of biological specimens from transmission electron microscopy data. NOTE that stable releases (including binaries) are longer stored at Sourceforge, but are available at http://xmipp.cnb.csic.es
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SCaVis
Scientific Computation and Visualization Environment
SCaVis is an environment for scientific computation, data analysis and data visualization for scientists, engineers and students. The program is fully multiplatform (100% Java) and integrated with Java and a number of scripting languages: Jython (Python), Groovy, JRuby, BeanShell. SCaVis can be used to plot functions and data in 2D and 3D, perform statistical tests, data mining, numeric computations, function minimization, linear algebra, solving systems of linear and differential... -
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Data Migrator for Oracle
Migrate/Copy your data between Oracle database and 13 major DBs.
Command line data Copy/Migration tool for Oracle. Supports Oracle 7.3, Oracle 8i, Oracle 9i, Oracle 10G, Oracle 11G and 13 major databases. 1. Exadata 2. Sybase ASE 3. Informix Innovator C 4. Sybase SQL Anywhere 5. DB2 UDB 6. CSV 7. SQLServer 8. MariaDB 9. Sybase IQ 10. PostgreSQL 11. MySQL 12. Informix IDS 13. TimesTen -
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miRStat
identification of common sets of microRNAs for groups of genes
miRStat enables identification of regulatory microRNA targeting several genes in a custom gene group. This Python application is based on the TargetScan 6.2 microRNA target prediction data. Conserved and Nonconserved site context+ scores files are required (unzip and place to directory with program). Available at http://targetscan.org/cgi-bin/targetscan/data_download.cgi?db=vert_61 -
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Data Migration Tools for RDBMS
DataMigrator for 14 major databases
Touch and go Windows command line data migration tool for 14 databases: 1. Sybase ASE 2. Informix Innovator C 3. Sybase SQL Anywhere 4. DB2 UDB 5. SQLServer 6. MariaDB 7. Sybase IQ 8. PostgreSQL 9. MySQL 10. Informix IDS 11. TimesTen 12. Oracle 13. SQL Lite 14. Exadata -
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DataMule
Extract-Copy-Load (ECL) tool for 14 databases.
Extract, Copy and Load operations for: 1. Sybase ASE 2. Informix Innovator C 3. Sybase SQL Anywhere 4. DB2 UDB 5. SQLServer 6. MariaDB 7. Sybase IQ 8. PostgreSQL 9. MySQL 10. Informix IDS 11. TimesTen 12. Oracle 13. SQL Lite 14. Exadata Total 224 data copy vectors. CSV -> DB. DB->DB DB->CSV -
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Advanced Numerical Instruments 2D
Advanced numerical instruments: adaptive meshing, FE methods, solvers
Ani2D provides portable libraries for each step in the numerical solution of systems of PDEs with variable tensorial coefficients: (1) unstructured adaptive mesh generation, (2) metric-based mesh adaptation, (3) finite element discretization and interpolation, (4) algebraic solvers. -
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Webcamgrab
Create random JPG wallpaper from a user updatable list of webcams
Webcamgrab randomly pulls a JPG image from a user maintained list of webcams and saves it to a specific file and location. Since the file name and location do not change, it can be selected for wallpaper. Written in Python 2.6, For Linux only, You will need to install or have installed Python and lynx (your Linux distro should offer them), I am using webcamgrab in Gnome 2. It should work with any GUI which lets you select a JPG for wallpaper, Can be launched once at start up or... -
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GEPETTO - Gene Prioritization in Java
GEPETTO (GEne Prioritization ExTended TOol)
GEPETTO (GEne PrioriTization ExTended TOol) is an original open-source framework, distributed under the LGPL license, for gene selection and prioritization on a desktop computer that ensures confidentiality of personal data. It takes advantage of the data integration capabilities in the SM2PH-Central Framework(KD4v,MSV3d,BIRD,..), combined with in-house developed gene prioritization methods. It currently incorporates six prioritization modules, based on gene sequence, protein-protein interactions, gene expression, disease-causing probabilities, genomic context). ... -
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openBmap
a free and open map of wireless communicating objects
openBmap collects data and provides open maps and statistics of all communicating objects: cellular antennas, wifi hotspots. All softwares from back-end to client are open-source under AGPL v3 license. -
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Hwrapper
Hwrapper is a python framework for hbase rest api
Hwrapper is python 3+ wrapper for hbase rest. (alternate download from pypi http://pypi.python.org/pypi/Hwrapper/0.1 ) Common Usage : start your hbase rest $bin/hbase rest start -p 9300 (Default port is 8080) check out wiki for more detailed tutorial. Creating a table hwrapper=Hwrapper() hwrapper.connectionParameters("host","port", False) // third argument set to false if you are not using https hwrapper.setAcceptType("json") columnFamilies={"cf","cf1"} hwrapper.create_table("table_name",columnFamilies) get Row data by ID (decoded base64 values) hwrapper.get_RowBy_ID("0000000-120529115546748") // outputs list of dicts, dicts contain column names and values Dropping a table hwrapper.drop_table("table_name") Displaying table schema hwrapper.table_schema("table_name") Listing all tables from hbase hwrapper.list_tables() -
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QUASR
Cross-platform NGS processing and analysis pipeline in Python
QUASR is a lightweight pipeline written to process and analyse next-generation sequencing (NGS) data from Illumina, 454, and Ion Torrent platforms. Although originally written for viral data, it is generic enough to work on any NGS dataset. Functions include: duplicate removal demultiplexing primer-removal quality-assurance (QA) graphing quality control (QC) consensus-generation minority-variant determination minority-variant graphing The main current version is 6.X, which is written in Python3. 7.X is my rewrite in Java, but is still work in progress. ... -
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VR Juggler is a virtual platform for virtual reality application development created at the Virtual Reality Applications Center at Iowa State University. Applications developed in VR Juggler can transparently move between a wide range of VR systems.
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pyxser stands for python xml serialization and is a python object to XML serializer that validates every XML deserialization against the pyxser 1.0 XML Schema. pyxser is written entirely in C as a python extension.
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ESML is an interchange technology that utilizes external metadata to allow applications to plug and play seamlessly with Earth Science specific datasets in heterogeneous formats.
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Redland is a set of object-based, modular and portable C RDF libraries providing RDF APIs for the graph, triple storage (librdf), RDF/XML parsing and serializing (Raptor), SPARQL RDF querying (Rasqal). Language APIs in Perl, PHP, Python, Ruby and others.
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*** NOTE: Version 4.0 development has moved to https://github.com/Hallikas/sspamm ... This space has saved as legacy data Semi's Spam Milter (sspamm), is python based SPAM filter for Sendmail that utilizes spambayes heurestic spam filtering. You also need Python Milter and Spambayes.
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Txt2tags converts a text file with minimal markup to HTML, XHTML, SGML, LaTeX, Lout, UNIX Man Page, Wikipedia, Google Code Wiki, DokuWiki, MoinMoin, MagicPoint(mgp), PageMaker. Features: simple, fast, automatic TOC, macros, filters, include, GUI/CLI/
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