Search Results for "research" - Page 30
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Showing 2867 open source projects for "research"
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CPAT
RNA coding potential assessment tool
Using RNA-seq, tens of thousands of novel transcripts and isoforms have been identified (Djebali, et al Nature, 2012 , Carbili et al, Gene & Development, 2011) The discovery of these hidden transcriptome rejuvenate the need of distinguishing coding and noncoding RNA. However, Most previous coding potential prediction methods heavily rely on alignment, either pairwise alignment to search for protein evidence or multiple alignments to calculate phylogenetic conservation score (such as CPC ,... -
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openWrt-snort
Image of OpenWrt OS, with snort community featured in.
Image of OpenWrt OS, with snort community featured in, for Raspberry Pi 4/ 4B+ and 400, basically for Processor BCM2711. Installed Snort Community Model to Intrusion Detection system. Prevention system not installed. eth0 used as output/ LAN socket, to run internet and access router. eth1, which can be USB -> Ethernet port, is used as WAN port, to connect Pi board to Internet IP. to flash img file, you can restore in SD card, or use Balena Etcher to flash. or you can use DD... -
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OpenAssistant
Chat-based assistant that understands tasks
...In the same way that Stable Diffusion helped the world make art and images in new ways, we want to improve the world by providing amazing conversational AI. We are in the early stages of development, working from established research in applying RLHF to large language models. Open Assistant is a project organized by LAION and individuals around the world interested in bringing this technology to everyone. The code and models are licensed under the Apache 2.0 license. Open Assistant will be free to use and modify. There will be versions which will be runnable on consumer hardware. ... -
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XAgent
An Autonomous LLM Agent for Complex Task Solving
XAgent is an AI-driven autonomous agent framework capable of handling multi-step tasks across different domains. It enables AI agents to perform decision-making, task planning, and self-learning based on user-defined objectives, making it ideal for automation and research applications. -
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MaxFEM
Software for electromagnetic simulation
MaxFem is an open software package for electromagnetic simulation by using finite element methods. The package can solve problems in electrostatics, direct current, magnetostatics and eddy-currents. Since version 0.4.0, MaxFEM requires Python 3. We have moved the installers to the MaxFEM website (see below). In order to improve MaxFEM, we will require you to fill out a simple form before downloading them. -
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Knobjex Info Manager
Tool for PIM, mind-mapping, quality-management, knowledge-base.
Also available for knowledge-enthusiasts: https://github.com/some-avail/freekwensie Knobjex 5.01 released partially; windows setup forthcoming; go to tab "Files" to download . Added shortcut keys (chapter 5.3) , dark themes better supported, removed bugs. No database-changes. Knobjex (short for Knowledge Objects) is an information-manager. It has many potential uses, such as calendar, task-list and sticky notes. Knobjex can also handle more advanced use-cases such as... -
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crossmap
convert genome coordinates betweeen assemblies
CrossMap is a program for convenient conversion of genome coordinates and genomeannotation files between assemblies (eg. lift from GRCh36/hg18 to GRCh37/hg19 or vice versa).It support file in BAM, SAM, BED, Wiggle, BigWig, GFF, GTF format. -
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Detectron
FAIR's research platform for object detection research
Detectron is an object detection and instance segmentation research framework that popularized many modern detection models in a single, reproducible codebase. Built on Caffe2 with custom CUDA/C++ operators, it provided reference implementations for models like Faster R-CNN, Mask R-CNN, RetinaNet, and Feature Pyramid Networks. The framework emphasized a clean configuration system, strong baselines, and a “model zoo” so researchers could compare results under consistent settings. ... -
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WebArena
Code repo for "WebArena to build Autonomous Agents
WebArena is a realistic web environment designed for building and testing autonomous agents, providing a platform for developing web-based AI agents. -
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SoftVC VITS Singing Voice Conversion
SoftVC VITS Singing Voice Conversion
...Unlike traditional text-to-speech systems, it specializes specifically in singing scenarios and does not provide general TTS functionality. The project leverages neural network architectures derived from VITS and SoftVC research to achieve high-quality voice transformation. It is commonly used in creative audio workflows, especially in communities experimenting with synthetic singing and character voices. The repository includes training and inference pipelines that enable users to build and apply custom voice models. Overall, so-vits-svc serves as a specialized toolkit for neural singing voice conversion and audio synthesis research. -
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DragGAN
Official Code for DragGAN (SIGGRAPH 2023)
DragGAN is a research-driven image editing system that enables precise manipulation of GAN-generated images through interactive point dragging. The project introduces a novel workflow where users move specific points in an image and the model intelligently deforms the content while preserving realism. Built on top of StyleGAN architectures, the tool operates directly on the learned generative manifold to maintain photorealistic consistency. -
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Autolabel
Label, clean and enrich text datasets with LLMs
Autolabel is a Python library to label, clean and enrich datasets with Large Language Models (LLMs). Autolabel data for NLP tasks such as classification, question-answering and named entity recognition, entity matching and more. Seamlessly use commercial and open-source LLMs from providers such as OpenAI, Anthropic, HuggingFace, Google and more. -
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NExfil
Fast OSINT tool for discovering web profiles by username
...NExfil processes these inputs and attempts to detect matching profiles across more than 350 websites within seconds. Because it is command-line based and open source, it can be easily integrated into OSINT workflows and cybersecurity research environments. -
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ReplitLM
Inference code and configs for the ReplitLM model family
...These models are designed specifically for coding workflows and are trained on large datasets of source code covering many programming languages and development environments. The repository also includes documentation and tutorials for integrating the models into development tools, APIs, or research pipelines. Developers can fine-tune the models using instruction-tuning techniques to adapt them for specific programming tasks or domains. The models were trained using modern deep learning techniques and large-scale GPU infrastructure to achieve strong performance in code completion and generation tasks. -
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ViReMa
Viral Recombination Mapper
ViReMa (Viral Recombination Mapper) detects and reports recombination or fusion events in virus genomes using deep sequencing datasets. Feb 2014 - Our paper (Open Access) is available at Nucleic Acids Research: "Discovery of functional genomic motifs in viruses with ViReMa–a Virus Recombination Mapper–for analysis of next-generation sequencing data" http://nar.oxfordjournals.org/content/42/2/e11 This is an on-going project and updates will be regularly posted. Please get in touch with any questions, problems or suggestions. -
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DeepMind Research
Implementations and code to accompany DeepMind publications
This repository collects reference implementations and illustrative code accompanying a wide range of DeepMind publications, making it easier for the research community to reproduce results, inspect algorithms, and build on prior work. The top level organizes many paper-specific directories across domains such as deep reinforcement learning, self-supervised vision, generative modeling, scientific ML, and program synthesis—for example BYOL, Perceiver/Perceiver IO, Enformer for genomics, MeshGraphNets for physics, RL Unplugged, Nowcasting for weather, and more. ... -
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QuantResearch
Quantitative analysis, strategies and backtests
QuantResearch is a large educational repository dedicated to quantitative finance, algorithmic trading, and financial machine learning research. The project contains numerous notebooks and research materials demonstrating quantitative analysis techniques used in financial markets. These include implementations of factor models, statistical arbitrage strategies, portfolio optimization methods, and reinforcement learning approaches to trading. The repository also explores financial modeling topics such as vector autoregression, Gaussian mixture models, and option pricing techniques. ... -
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Lightning-Hydra-Template
PyTorch Lightning + Hydra. A very user-friendly template
...Not fitted for data engineering - the template configuration setup is not designed for building data processing pipelines that depend on each other. PyTorch Lightning, a lightweight PyTorch wrapper for high-performance AI research. Think of it as a framework for organizing your PyTorch code. Hydra, a framework for elegantly configuring complex applications. The key feature is the ability to dynamically create a hierarchical configuration by composition and override it through config files and the command line. -
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Python Laboratory Operations Toolkit
many useful snippets for using python in a laboratory
A toolkit of Python software useful in a laboratory data acquisition and analysis environment. Includes support for such protocols as VXI-11 (and its extension, LXI), Vernier LabPro (now very old), and National Instruments DSTP (now very old). Also includes data analysis and modelling tidbits. Python3 updates are on the way in the very near future for the biggest packages. the vxi11 package is fully up-to-date, although see the blog post about python 3.13 -
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NuPIC
Numenta platform for intelligent computing
...To install from local source code, run from the repository root. We plan to do minor releases only, and limit changes in NuPIC and NuPIC Core to features needed to support ongoing research. -
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LLaMA
Inference code for Llama models
“Llama” is the repository from Meta (formerly Facebook/Meta Research) containing the inference code for LLaMA (Large Language Model Meta AI) models. It provides utilities to load pre-trained LLaMA model weights, run inference (text generation, chat, completions), and work with tokenizers. Tokenizer utilities, download scripts, shell helpers to fetch model weights with correct licensing/permissions. -
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funNLP
Resources, corpora, and tools for Chinese natural language processing
...It also includes links to academic papers, open-source model implementations, and practical utilities like word segmentation or text cleaning scripts. The project is highly community-oriented, frequently updated with contributions and new resources, and it’s widely used in both academic and applied NLP research. Its value lies in providing not just tools but also curated, domain-specific data, which can be hard to find elsewhere. -
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showyourwork
A workflow for reproducible and open scientific articles
showyourwork is a workflow management tool for open source scientific articles. If you want to make your research article reproducible, extensible, transparent, or just downright awesome, you’ve found the right tool. showyourwork automates your entire workflow, packaging it into a self-contained recipe that anyone can follow and, at the click of a button, use to reproduce your results. -
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smolOS
A tiny and simple research operating system
smolOS is a minimalist 16-bit operating system written in pure Assembly for x86 real mode. Its goal is to demonstrate the fundamentals of how an OS boots, handles input, and displays output using only the most essential code. smolOS fits in a single boot sector and runs directly on BIOS-compatible hardware or emulators like QEMU. It’s ideal for those seeking to understand bootloaders, BIOS interrupts, and ultra-low-level system programming through a practical and tiny project.
