Search Results for "research"

VAERity is a free, open source tool to graphically explore the VAERS data set. It aims to eventually expand in scope to allow fast querying of arbitrary large datasets. It utilizes vaex and pandas as required to provide a balance of speed and query flexibility.

ECOLOG is a specimen-based, cross-platform relational database management system, aimed at the storage, retrieval and preliminary analysis of data on sites, species, and specimens gathered in ecological field surveys and biodiversity inventories. The main goal of ECOLOG is to make the data gathered in ecological field surveys readily accessible, providing lists of species collected in the study area and informations on habitat preferences, abundance or rarity of a given species, biometrics,...

The GetData library provides an API to interface with Dirfile databases. The Dirfile database format is designed to provide a fast, simple, scalable format for storing and reading binary, synchronously-sampled, time-ordered data.

This project is intended to provide code to be used with MySQL and Python to create a database of major league baseball game events which are freely provided by the mlb.com Gameday application. Older version also support creating a retrosheet.org database but that is no longer supported. All major and minor league pitch location and game statistic data can be downloaded using BBOS. Installation Videos! Part 1: http://youtu.be/rnv2VLcG-eI Part 2: http://youtu.be/eFudbMWHNlQ Special...

A database with a web interface for storing the experimental results of research, aimed at ease of adding new types of data. Goal is to make adding as simple as one day for an unexperienced in programming scientist to add a new type of data similar to an existing type, by preparing two - three files analogues to the existing ones. An experienced programmer should need only one day to one week for adding a totally new kind of data like arrays with more dimensions that was available before.

Smart-M3 is a functional platform that provides a cross domain search extent for triple based information. Smart-M3 enables smart cross domain applications that rely on information level interoperability.

Project has moved to: https://github.com/OptimalBPM/qal QAL is a collection of libraries for mining, transforming and writing data from and to a number of places. Sources and destinations include different SQL and NoSQL backends, file formats like .csv, XML and excel. Even untidy HTML web pages. It has a database abstraction layer that supports connectivity to Postgres, MySQL, DB2, Oracle, MS SQL server. JSON and MongoDB is coming. It uses XML/JSON formats(self-generated SQL...

A security tool for detecting and exploiting vulnerabilities in NoSQL databases, similar to SQLMap for traditional databases.

New version moved to http://github.com/ctuning/ck Collective Mind framework (cM) is an open-source plugin-based schema-free repository and infrastructure for collaborative, systematic and reproducible research and experimentation. This 3rd version (started in 2006) helps to implement, preserve, share and reproduce the whole experimental setup as connected modules and data. cM uses crowdsourcing to leverage knowledge and computational resources of multiple users. For example, it includes multi-objective GCC, LLVM and ICC auto-tuning scenarios using shared benchmarks, codelets, data sets, tools, and combined with classification and predictive models. cM includes OpenME interactive interface to open up and expose internals of various third-party tools such as GCC, LLVM, run-time systems, etc. and connect them to cM through dynamic plugins that allows online analysis and tuning of programs and architectures. ...

The goal of PyTables is to enable the end user to efficiently and easily manipulate large datasets (both homogenous, i.e. arrays, and heterogenous, i.e. tables) on a persistent, hierarchical way.

A database to support large history research projects. This is desktop application focuses on aiding individuals working on large projects like books and dissertations.

Comman-line client to Entrez, e-utilities, written in Python, developed for Linux

wreport has moved to: https://github.com/ARPA-SIMC/wreport dballe has moved to: https://github.com/ARPA-SIMC/dballe bufr2netcdf has moved to: https://github.com/ARPA-SIMC/bufr2netcdf

FlightFeather's goal is "social networking for everyone". This means that anyone should have a chance to run a popular social networking site -- on minimal hardware, and without wasting bandwidth.

pyMantis is a data-management system for (systems) biology build on the web2py framework. It features: tree based file explorer, relational db table wizzard with automated creation of user interfaces, internal and external access management, wiki, ..

Framework (scripts, configuration, code) to build free and public services around travel and leisure data. That project makes an extensive use of already existing data sources such as Geonames and dbPedia, and adds some glue around those (eg, links).

<This project has been completely rewrote and transformed into a new one: https://sourceforge.net/projects/deday/. 2013/06/26> The graphic user interface for DEDA (DEmography Data Analysis), a scientific software package fitting survivalship data to a number of distributions using maximum likelihood (ML) method. Currently, Weibull (2p), Gompertz and Gompertz-Makeham are supported. IMPORTANT NOTICE: Only the GUI is provided here. In order to perform the analysis, one also need the DEDA...

Plantlore is a botanical occurence database being written in Java. It also has a BIOCASE Provider software based web interface.

This is intended as an open-source, multi-platform link diagramming tool for intelligence analysis. The goal is to be able to store objects using any database abstraction or in XML. This project needs much wheel reinvention, so assistance is welcome.

The csvdatamix project aims to randomize CSV input data files in order to conceal the original state of the data. Similar to data masking or data transformation. Also has mapping abilities to translate back to the original state of the data.

DataFinder is a data management client developed in Python that primarily targets the management of scientific technical data. The system is able to handle large amounts of data and can be easily integrated in existing working environments.

The SplitDB project gives practitioners of statistical tools for inferring phylogenies a way to store, retrieve and visualize important properties, like convergence, of the overwhelmingly large resulting tree-sets produced by these tools.

A database and a web front end for physiologic data on animal feeding, developed with PostgreSQL and Django at NESCent (http://www.nescent.org) for Mammalian Feeding Working Group (http://www.feedexp.org). Current development of the codebase is on Github at http://github.com/NESCent/feedingdb.

Microarray Gene Expression Database Group and OMG Gene Expression Standard (MAGE)

A collection of tools for working with the comparative data analysis ontology including import/export facilities for common phylogenetic file formats, and also a triple-store framework.