Search Results for "structural" - Page 2
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Showing 45 open source projects for "structural"
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Open Delays
A program that gather trains delays data
...Delays are published by train companies, but only the current day is available. Open Delays intends to gather this data in the longer term, so users can have a statistical vision on the train they use, and control and identify structural problems in train exploitation. This also allows to know for example if the train you are stepping in had 15mn delay in 30% of the cases : if you have this kind of information, you know you will have probably a delay. -
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xPyder PyMOL Plugin
Analyze and visualize coupled residues and their networks in proteins
...PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level. -
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SPADE
A toolkit for developing and deploying protein structure algorithms.
The Structural Proteomics Application Development Environment is a Python tool kit for developing and deploying bioinformatics applications. Handles graphics, analysis, and modeling of protein sequence and structure. Source and Win installers available. SPADE source code can be cloned from http://www.github.com/deaconjs/SPADE. -
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ScrumPy - Metabolic Modelling In Python
Comprehensive and extensible metabolic modelling tool
This SF project still under development. Use http://mudshark.brookes.ac.uk/ScrumPy while this message remains Comprehensive and extensible metabolic modelling tool. Kinetic and Structural modelling in a python environment. Includes MCA, Null-space, Elementary modes, FBA, a modelling oriented interface to MetaCyc, plotting and more. -
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A functional-structural model of tree growth based on carbon partitioning among individual organs that compete for resources.
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Chemical Reaction
Balance chemical reaction and compute material balance
This Python program is used to balance a chemical reaction and to compute the material balance. Furthermore, it's able to check molecules and to write the condensed strutural formula from the name of an organic molecule. (Those both functionalities are still limited.) -
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ParaSim
Parallelized calculation of molecular similarities
...As as special feature, ParaSim allows to store and and to access frequently queried datasets as persistant objects in memory for short response times. ParaSim calculates chemical similarities based on binary structural fingerprints. It does not compute fingerprints by itself but relies on third party software to do so. Basically, all types of structural fingerprints which can be stored in an array of bits (a bitset) can be used by ParaSim. See the Wiki (https://sourceforge.net/p/parasim/wiki/Documentation/) for detailed documentation. FEEDBACK HIGHLY APPRECIATED! -
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pyTruss
Simple 3D Structural Analysis
Basic 3D structural analysis in python. GUI allows building simple 3D shapes, applying static loads and monitoring dynamic load on beams. Based on OpenGL and ODE. -
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pySTEP or Python Strongly Typed gEnetic Programming: A light Genetic Programming API that allows the user to easily evolve populations of trees with precise grammatical and structural constraints.
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The neuroimaging in python (NIPY) project is an environment for the analysis of structural and functional neuroimaging data. It currently has a full system for general linear modeling of functional magnetic resonance imaging (fMRI).
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ContBeam is a program capable of solving structural configurations of continuous beams on multiple supports. it handles conditions and load combinations provide being output characteristics of the stress and deformation of the structure
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MBDyn_sim_suite is a collection of free pre&post-processing tools and simulation models for the open-source multi-body analysis software MBDyn forming a general purpose simulation environment for structural dynamics with an emphasis on wind turbines.
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Small Python programs for the structural designer / Pequeños programas para el diseñador de estructuras hechas en Python
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Wattos is a collection of mostly Java programs for Structural Biology and NMR Spectroscopy. It's programs analyze, annotate, parse, archive, and disseminate experimental NMR data deposited by authors world wide into the PDB and BMRB.
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Lojread is a project designed to aid in the learning of the conlang, lojban. It assists the student in reading the lojban language in such a way that they can build their vocabulary and structural understanding.
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SureFit generates 3D mesh surfaces (in VTK and Caret formats) from 3D structural MRI volumes (in formats such as Analyze, AFNI, raw).
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PySDB is simple to use field data manager for structural geologists written in Python. Data are traditionally organized by sites and rock units, classified by structural types and could be freely tagged by user-defined labels.
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A functional-structural model of Almond tree growth based on carbon partitioning among individual organs that compete for resources.
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Collection of wrappers for textile composite modelling package TexGen and a variation of structural FEA packages (baseline being Calculix) to allow extraction of 3D mechanical property data.
