Search Results for "structural"
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Showing 66 open source projects for "structural"
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Skill Scanner
Security Scanner for Agent Skills
This repository is a public security-focused scanning tool intended to analyze and assess AI agent skills for potential issues, quality concerns, and vulnerabilities. It acts as a scanner that inspects Agent Skills packages to flag structural problems, inconsistencies, or security flaws before they are deployed or integrated into agent workflows. Because agent skills can contain executable instructions and logic, scanning them for risky patterns is essential to prevent inadvertent exploitation when used by intelligent systems. The tool supports maintainers and community contributors in automating quality checks and enforcing conventions across skill sets in a standardized way. ... -
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Torch Pruning
DepGraph: Towards Any Structural Pruning
Torch-Pruning is an open-source toolkit designed to optimize deep neural networks by performing structural pruning directly within PyTorch models. The library focuses on reducing the size and computational cost of neural networks by removing redundant parameters and channels while maintaining model performance. It introduces a graph-based algorithm called DepGraph that automatically identifies dependencies between layers, allowing parameters to be pruned safely across complex architectures. ... -
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JSON_REPAIR
A python module to repair invalid JSON from LLMs
...Instead of failing when encountering errors such as missing quotes, trailing commas, or incomplete objects, the library analyzes the malformed data and reconstructs it into valid JSON. The repair process can also be combined with optional JSON Schema validation to enforce structural constraints and ensure the output conforms to expected data types and formats. Developers can integrate the library into applications as a drop-in replacement for standard JSON parsing functions, allowing systems to tolerate imperfect structured data without crashing. -
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geo-sleuth
An agent skill that finds where a photo was taken
...The system can analyze images even when GPS metadata, recognizable landmarks, or readable signs are unavailable. It evaluates physical clues such as mountain skylines, bridge geometry, shadows, and structural distances to narrow the search. Specialized Python scripts collect, score, and rank geographic candidates before the AI agent evaluates the strongest matches. Results include estimated coordinates, camera direction, confidence levels, and supporting visual evidence. Geo-Sleuth integrates with Claude Code, Codex, Cursor, Gemini CLI, OpenCode, and GitHub Copilot. -
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code-review-graph
Local-first code intelligence graph for MCP and CLI
Code Review Graph is a local-first code intelligence tool that builds a persistent structural map of a software repository. It parses source files with Tree-sitter and stores functions, classes, imports, calls, inheritance, and test relationships in a SQLite graph. When code changes, blast-radius analysis identifies the callers, dependents, and tests most likely to be affected. AI coding assistants can query this focused context through MCP instead of repeatedly scanning an entire codebase. ... -
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Qwen-Image-Layered
Qwen-Image-Layered: Layered Decomposition for Inherent Editablity
...This architecture allows richer semantic interpretation, enabling use cases such as scene decomposition, object-level editing, layered captioning, and more fine-grained multimodal reasoning than with flat image encodings alone. By combining text and structured image representations, it aims to facilitate tasks where both descriptive and structural understanding are important, such as detailed image QA, interactive image editing via prompt layers, and image-conditioned generation with structural control. The layered approach supports training signals that help the model learn how visual elements relate to each other and to textual context, rather than simply learning global image embeddings. -
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AlphaFold 3
AlphaFold 3 inference pipeline
...This repository provides the complete inference pipeline for running AlphaFold 3, though access to the model parameters is restricted and must be obtained directly from Google under specific terms of use. The system is designed for scientific research applications in structural biology, biochemistry, and bioinformatics, enabling accurate modeling of proteins, ligands, and covalent modifications. Users can perform local predictions via Docker containers, integrating AlphaFold 3’s inference process with provided JSON input configurations. The software includes flexible options for running both data preprocessing and GPU-accelerated inference, allowing users to adapt to available computational resources. -
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GraphEmbedding
Implementation and experiments of graph embedding algorithms
GraphEmbedding is an open-source Python project for implementing and experimenting with graph embedding algorithms. It follows a simple “graph in, embedding out” design. The library uses NetworkX graphs as input and produces vector representations for graph nodes. It includes implementations of DeepWalk, LINE, Node2Vec, SDNE, and Struc2Vec. Users can configure walks, embedding dimensions, training windows, epochs, and other model-specific parameters. Example scripts demonstrate how to train... -
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Three.js Object Sculptor
Codex plugin that turns attached object images into code-only
...It first evaluates whether the image is suitable and produces an ObjectSculptSpec describing geometry, materials, lighting, hierarchy, pivots, and quality targets. Codex then follows staged passes from blockout and structural work through surface detail, interaction design, and optimization. Generated models include meaningful sockets and anchors for animation, transformation, physics, and destruction. Reference and rendered screenshots can be combined for AI vision review and scored self-correction. The workflow targets browser-friendly props and stylized reconstructions rather than photogrammetry or exact mesh extraction. -
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statsmodels
Statsmodels, statistical modeling and econometrics in Python
...Generalized linear models with support for all of the one-parameter exponential family distributions. Markov switching models (MSAR), also known as Hidden Markov Models (HMM). Vector autoregressive models, VAR and structural VAR. Vector error correction model, VECM. Robust linear models with support for several M-estimators. statsmodels supports specifying models using R-style formulas and pandas DataFrames. -
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Scrapling
An adaptive Web Scraping framework
Scrapling is an adaptive web scraping framework designed to handle everything from a single HTTP request to large-scale, concurrent crawls. Built for modern websites, it intelligently adapts to structural changes by automatically relocating elements when page layouts update. The framework includes advanced fetchers capable of bypassing anti-bot protections such as Cloudflare Turnstile using stealth and browser automation techniques. Its powerful spider system supports multi-session crawling, pause and resume functionality, and real-time streaming of scraped data. ... -
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MarkPDFDown
A high-quality PDF to Markdown tool based on large language model
MarkPDFdown is an open-source document processing tool designed to convert PDF files into structured Markdown output that can be easily used for documentation, content pipelines, and AI processing workflows. The project focuses on extracting text, formatting, and structural information from complex PDF documents and transforming that information into clean Markdown that preserves the original hierarchy of headings, paragraphs, tables, and lists. By producing Markdown rather than raw text, the tool makes it easier to integrate documents into knowledge bases, documentation systems, or language model pipelines that rely on structured input. ... -
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img2threejs
Rebuild the object in a reference image as a code-only, procedural
...A staged pipeline evaluates suitability, defines a detailed specification, builds successive passes, renders browser previews, and compares them with the source image. Quality gates require structural detail, material realism, correct attachments, and passing visual-review scores. The system can classify objects, characters, and hybrid subjects, with specialized reconstruction paths for each. It works with Claude Code, Codex, or OpenCode and can refine its specification or code when a review fails. -
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Cangjie Skill
Distill high-value content like books, long videos, podcasts, and more
cangjie-skill is a workflow for converting books and other long-form knowledge into executable AI skill packs. Its goal is structured reuse rather than producing another summary or set of reading notes. The seven-stage RIA-TV++ pipeline analyzes the full source, extracts candidate frameworks, verifies them, constructs skill modules, links related ideas, pressure-tests behavior, and prepares delivery files. Each accepted skill records supporting material, a reconstructed explanation,... -
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Flask-Migrate
SQLAlchemy database migrations for Flask applications using Alembic
...It provides a set of command-line routines tied into Flask’s CLI such that developers can generate migration scripts, apply upgrades, and roll back changes with simple commands, keeping the database structure in sync with evolving application models. The extension handles versioning of the database schema so teams can track and share structural changes alongside application code, reducing manual migration errors and enabling collaborative development. Flask-Migrate also supports branching and merging workflows by generating human-readable migration scripts that developers can review, edit, and commit to version control. -
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dots.ocr
Multilingual Document Layout Parsing in a Single Vision-Language Model
dots.ocr is a cutting-edge multilingual document parsing system built on a unified vision-language model that combines layout detection, text recognition, and structural understanding into a single architecture. Unlike traditional OCR pipelines that rely on multiple specialized components, dots.ocr integrates these processes end-to-end, reducing error propagation and improving consistency across tasks. The model is designed to recognize virtually any human script, making it highly effective for global and low-resource language scenarios. ... -
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CyberPPT
A Codex Skill for generating high-density, editable PowerPoints
CyberPPT is a Codex Skill for converting documents, research, and business data into dense, editable, consulting-style PowerPoint presentations. It extracts facts, numbers, claims, recommendations, conflicts, and caveats from formats such as PDF, DOCX, TXT, and XLSX. The workflow builds an MBB-style evidence table before developing storylines and converging on an SCR narrative. Users select from eight fixed visual systems, after which the skill plans each slide’s hierarchy, grid, charts,... -
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LLM TLDR
95% token savings. 155x faster queries. 16 languages
LLM TLDR is a tool that leverages large language models (LLMs) to generate concise, coherent summaries (TL;DRs) of long documents, articles, or text files, helping users quickly understand large amounts of content without reading every word. It integrates with LLM APIs to handle input texts of varying lengths and complexity, applying techniques like chunking, context management, and multi-pass summarization to preserve accuracy even when the source is very large. The system supports both... -
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Penzai
A JAX research toolkit to build, edit, & visualize neural networks
Penzai, developed by Google DeepMind, is a JAX-based library for representing, visualizing, and manipulating neural network models as functional pytree data structures. It is designed to make machine learning research more interpretable and interactive, particularly for tasks like model surgery, ablation studies, architecture debugging, and interpretability research. Unlike conventional neural network libraries, Penzai exposes the full internal structure of models, enabling fine-grained... -
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Protenix
A trainable PyTorch reproduction of AlphaFold 3
Protenix is an open-source, trainable PyTorch reimplementation of AlphaFold 3, developed by ByteDance with the goal of democratizing high-accuracy protein structure prediction for computational biology and drug-discovery research. Protenix provides a complete pipeline for turning protein sequences (with optional MSA / sequence alignment) or structural inputs (e.g. PDB/CIF) into full 3D atomic-level structure predictions. It supports both “full” models and lightweight variants such as “Protenix-Mini,” offering a trade-off between speed/compute cost and predictive accuracy — making structure prediction accessible even in resource-constrained environments. The project also includes support for constraints (e.g., specifying residue- or atom-level contact constraints, or pocket constraints) to guide predictions toward biologically or experimentally relevant conformations, which enhances its utility for tasks like modeling complexes, ligands, or antibody–antigen interactions. -
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LLM-Pruner
On the Structural Pruning of Large Language Models
...LLM-Pruner addresses this issue by identifying and removing non-essential components within transformer architectures, such as redundant attention heads or feed-forward structures. The framework relies on gradient-based analysis to determine which parameters contribute least to model performance, enabling targeted structural pruning rather than simple weight removal. After pruning, the framework applies lightweight fine-tuning methods such as LoRA to recover performance using relatively small datasets and short training times. -
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Tencent Cloud Code Analysis
Static code analysis
Tencent Cloud Code Analysis (TCA for short, used internally by the R&D code CodeDog ) is a cloud-native, distributed, high-performance comprehensive code analysis and tracking platform that integrates many analysis tools, including server, web and client The three components have integrated a number of self-developed tools, and also support the dynamic integration of analysis tools of various programming languages in the industry. Obtain the Tencent Cloud code analysis platform by... -
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NAVAL-SEM
Award-winning open-source offline SEM platform for PLS-SEM & CB-SEM
NAVAL-SEM is an award-winning, free and open-source offline Structural Equation Modeling (SEM) platform supporting PLS-SEM and CB-SEM workflows. Designed for researchers, PhD scholars, professors, and analysts, it provides visual model building, measurement assessment, structural model analysis, and reproducible research workflows without subscriptions or cloud dependency. Features include: • PLS-SEM & CB-SEM • Bootstrapping, mediation, moderation & conditional process analysis • HTMT, AVE, Composite Reliability, Cronbach's Alpha, Fornell-Larcker • VIF, f² effect size, indirect effects, Q² blindfolding, PLSpredict, CVPAT • Multi-Group Analysis (MGA), HOC, MICOM • IPMA, NCA, nonlinear effects, FIMIX-PLS, PLS-POS, endogeneity checks • EFA, CVI, measurement validation, fsQCA • APA report generation and R/Python/Lavaan export Fully offline and available for Windows, macOS, and Linux. ... -
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FreeSEM
Free and open-source desktop application designed for SEM
FreeSEM is a free, open-source desktop application designed for researchers and students to perform Structural Equation Modeling (SEM) for statistical and research analysis. It allows users to visually build models using a drag-and-drop interface to create path diagrams and analyze relationships between observed and latent variables. The software supports methods such as exploratory factor analysis, covariance-based SEM, partial least squares SEM, and meta-SEM, and it provides model fit statistics like CFI, TLI, RMSEA, SRMR, and chi-square to evaluate models. ... -
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DGL
Python package built to ease deep learning on graph
...We also want to make the combination of graph based modules and tensor based modules (PyTorch or MXNet) as smooth as possible. DGL provides a powerful graph object that can reside on either CPU or GPU. It bundles structural data as well as features for a better control. We provide a variety of functions for computing with graph objects including efficient and customizable message passing primitives for Graph Neural Networks.
