Search Results for "correlation" - Page 2
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Showing 42 open source projects for "correlation"
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darc
Durham Adaptive-optics Real-time Controller
darc, the Durham Adaptive optics Real-time Controller. For documentation or darctalk client only, select "View all files". For the latest bleeding-edge version, please use: git clone git://git.code.sf.net/p/darc2/code darc (no password required) (this changed May 2013 due to a sourceforge update). If you use darc, please cite with: Basden, A and Myers, R, MNRAS Vol 242, page 1483, 2012 -
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MethyMer
Design of specific primer combinations for bisulfite sequencing
...SpG islands) and includes specificity test (based on bowtie alignment against bisulfite-treated genome). It also incorporates TCGA CpG methylation (microarrays) and gene expression (RNA-Seq) data, as well as methylation-expression correlation analysis results for 20 human cancer types. ENCODE genome regions annotation data are also integrated in MethyMer -
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QSdpR
Viral Quasispecies Reconstruction software based on QSdpR algorithm
This is a viral quasispecies reconstruction software for quasispecies assembly problem on mRNA viruses, which is based on a correlation clustering approach and uses semidefinite optimization framework. The software accepts a reference genome, a NGS read set aligned to this reference and set of SNP locations in the form of a vcf file and outputs an optimal set of reconstructed species genomes which describes the underlying viral population. -
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AlienVault OSSIM
Open Source SIEM
OSSIM, AlienVault’s Open Source Security Information and Event Management (SIEM) product, provides event collection, normalization and correlation. For more advanced functionality, AlienVault Unified Security Management (USM) builds on OSSIM with these additional capabilities: * Log management * Advanced threat detection with a continuously updated library of pre-built correlation rules * Actionable threat intelligence updates from AlienVault Labs Security Research Team * Rich analytics dashboards and data visualization -
99.99% Uptime for MySQL and PostgreSQL DatabasesCloud SQL Enterprise Plus delivers near-zero downtime with 35 days of point-in-time recovery. Supports MySQL, PostgreSQL, and SQL Server.
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CorNetMap
A tool for Gene Expression Correlation Network
...Can be used for analysis of any data set beyond gene expression. 2. Capable of both two-dimensional and multidimensional data analysis. 3. Calculate Pearson correlation and cross-correlation for analysis data with phase difference. 4. Generate correlation Heat-map and draws network map. 5. Save correlation data as text file. How to use and doccumentation: https://sourceforge.net/projects/cornetmap/files/Documentation_corNetMap.pdf Sample data for testing: https://sourceforge.net/projects/cornetmap/files/Test%20Data/ Citation: Cite CornetMap as " Khaund, A. ... -
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lxnstack
A program to align and stack astronomical images.
Lxnstack is a program designed to align and stack astronomical images (both planetary and deep-sky). The features of latest version are: * Several stacking methods (average, median, sigma-clipping, ...) * Two automatic align method: align-points; phase correlation, * One manual align method. * sub-pixel precision (0.1 pixel for phase correlation and 0.01 pixel for manual alignment). * Automatic image derotation. * FITS file support (by installing the python2 package 'astropy') * Hot pixels suppression algorithm * CR2 files native support * Can load/save video * Grayscale RAW image support * Editing of result image's levels... -
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DAWG
Dynamic Event List for Fault Management
A Next Gen Event/Alert/Alarm list in a PostgresQL and Hadoop backend. HTML5 and js front end. -
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M0Droid
A malware detection technique
This is an Android malware detection technique based on system call extraction. The code is written with Python 2.7 and require Android SDK to launch virtual Android device and communicate with it. This program uses correlation coefficient to compare the signature of the app with the dataset (blacklist). -
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xPyder PyMOL Plugin
Analyze and visualize coupled residues and their networks in proteins
xPyder is a PyMOL plugin to analyze and visualize on the 3D structure dynamical cross-correlation matrices (DCCM), linear mutual information (LMI), communication propensities (CP), intra- and inter-molecular interactions (e.g. PSN), and more, to produce highly customizable publication-quality images. xPyder identifies networks (using concepts from graph theory, such as hubs and shortest path searching), compares matrices and focuses the analysis on relevant information by filtering the data using a modular, user-expandable plugin system that takes advantage of structural and dynamical information, contributing to bridge the gap between dynamical and mechanical properties at the molecular level. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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math toolkit
A C++ and Python library for finance, statistics and linear algebra.
...Finance features include compound rate present/future value, annuity, various present/future value coefficients ... Statistics features include mean, median, variance, standard deviation, covariance, correlation, linear regression, probabilities and random variates of various distributions ... Linear algebra features include matrix arithmetic, inverse, determinant, rank, linear system solution, lu/qr decomposition, svd, eigen values/vectors ... And some auxiliary features like random number generators, equation solution, numerical integration, permutation/combination and gcd/lcm etc. ... -
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GIPC
Geographical IP Correlation
TL;DR Version: I wrote a tool called GIPC (short for Geographical IP Correlation and pronounced Gypsy) which takes a list of IP address and returns the Geographical information you select based on the MaxMind.com GeoCity Database. The exe requires 2 inputs: The IP file (one IP per line) MaxMind GeoCity database – This can be downloaded HERE:http://geolite.maxmind.com/download/geoip/database/GeoLiteCity.dat.gz Please read more on my blog: http://jcsocal.blogspot.com/2013/03/geographical-ip-correlation-tool.html -
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Vigilo is a complete monitoring system designed for large environments thanks to a fully scalable and modular architecture. Built around Nagios, Vigilo integrates metrology graphs, map views, events correlation and reporting.
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... * tblred: compute ("reduce") aggregations (e.g., sum, average) over groups defined by key columns. * tbldesc: Summarize columns in file (e.g., proportion of character/numeric values, min/mean/median/max, missing values, correlation with a target column). * tbljoin: Relational join without the need of pre-sorting and column matching. * ... See HostedApps/MediaWiki for examples.
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Oree - Optimum Real-time Estimation of Events of Interaction: real-time reconstruction of photon interaction events in Gamma Cameras. Optionally making use of a CUDA enable GPU, Oree achieves reconstruction of over 1M events/sec.
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PortscanGeoinfo is a plugin for the powerful Prelude correlation engine. This plugin correlates alerts from Snort NIDS and OSSEC HIDS sensors regarding portscans. Geographical information (GeoIP) is included in the correlated alert.
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A GUI application permits you to solve more than 25 types of operations including vector product,regression,correlation,equation solve,permutation,combination,factorial,mean,mode,quartiles, median, moments & more. Try it!
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Canopsis is the first Open Source Hypervisor. It's built on top of existing monitoring solutions (Shinken, Nagios, Syslog)… Its goals is to correlate events from those solutions and fills the gap between technical monitoring and business monitoring.