Search Results for "input-leap" - Page 18
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Showing 574 open source projects for "input-leap"
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PhyloTrack
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting clade-defining polymorphism. This functionality has been implemented using the tabix tool on the server side, providing simple and rapid access to the information at each tree node, including informative SNPs stored in VCF-similar files. ... -
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pythonProp is a collection of Python scripts designed to work with VOACAP, allowing users to create input files using a Graphical User Interface and plot output files.
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MDcons(Molecular Dynamics consensus)
Interpretation of Biomolecular MD simulations
MDcons is a tool to analyze conserved contacts during Molecular Dynamics (MD) simulations of Protein, Rna, Dna & Ligand based complexes. The input is either a Molecular Dynamics trajectory or a set of snapshots. The input can also be a single snapshot. The outputs are (1) map of most/less frequently conserved contacts during MD (2) a list of most/less frequently conserved contacts during MD. -
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FABS
Fluorescence and absorption spectroscopy made easy
FABS is a program designed to run a fluorescence/absorption spectrometer on Windows. The program analyzes spectra and provides graphs and data files. Users may choose to input video files from cell phones or other cameras, still images, or even live streams of video from webcams. FABS can perform any necessary calibration and image preprocessing. Experienced users have a number of more advanced options such as background subtraction, adjustments for nonlinearities in detector response, and graph smoothing. ... -
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C++, Matlab and Python library for Hidden-state Conditional Random Fields. Implements 3 algorithms: LDCRF, HCRF and CRF. For Windows and Linux, 32- and 64-bits. Optimized for multi-threading. Works with sparse or dense input features.
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LWPR
Locally Weighted Projection Regression (LWPR)
Locally Weighted Projection Regression (LWPR) is a fully incremental, online algorithm for non-linear function approximation in high dimensional spaces, capable of handling redundant and irrelevant input dimensions. At its core, it uses locally linear models, spanned by a small number of univariate regressions in selected directions in input space. A locally weighted variant of Partial Least Squares (PLS) is employed for doing the dimensionality reduction. Please cite: [1] Sethu Vijayakumar, Aaron D'Souza and Stefan Schaal, Incremental Online Learning in High Dimensions, Neural Computation, vol. 17, no. 12, pp. 2602-2634 (2005)... -
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simplex with branch and bound
A tool for teaching simplex and branch & bound methods
This is a tool for teaching simplex and branch & bound methods. For simplex method, it comes with several examples including degeneracy and cycling, and allow the user to dictate how to pivot. For branch and bound method, it is desinged to interact with the user to explore all possible branch and bound trees. The user can also load a problem from a text file or simply type in a model directly. The format is very simple and very similar to the LP format, see the packed-in examples. -
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globalsoilmap.net/GSIF AG toolbox
facilitating predictions of parameters using statistical models
streamline the DSM process in ArcGIS/Numpy/GDAL/Python using Sampling, Statistical elaboration, Prediction to allow the application of extended statistical models generated by the CUBIST (TM) or JMP (TM) software to a set of auxiliary input parameters, thereby bypassing the need to i) manually calculate the equations using Raster calculator; ii) use a grid-to-point conversion process prior to applying the prediction model in the statistical software itself and then a point-to-grid conversion process. -
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quichem
Utilities for fast input of chemical formulae and equations.
*** New releases of quichem will only be available on GitHub. *** quichem is a utility written in pure Python allowing for fast input and parsing of chemical formulae and equations. Entering data does not require any modifier keys or keystrokes to be pressed. This SourceForge page provided pre-built Windows binaries of quichem-pyside. **To run quichem on Mac OS X or Linux**, or with the wxPython front-end, please download the source from quichem's GitHub page at: github.com/spamalot/quichem. -
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wiki export tool
A tool for exporting Wikipedia data
A simple tool, created in a French project "CoMeRe", for exporting data from all Wikimedia fundation projects, include Wikipedia. To use this, you need prepare two things: Target dump of Wiki Target page name Then, configure the tool with dump path and input the page name, finally just let's it run, you will get the target page. Duration is dependent on size of the dump, and the number of pages. Take care for using option "talk, other talk...", this is now only for french corpora. -
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DataCopy For SQLServer
Data Copy tool for SQL Server and Oracle
Migrate your data from SQLServer to Oracle without creating single dump file. Input is a SQLServer query file defining dataset you want to copy to Oracle. Target table has to exist for copy to go through. Turbo mode offers 5x copy performance improvement. -
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Tiny Python Panadapter
Simple Panadapter for I/Q Audio or RTL_SDR dongle
See article in QST, April, 2014, pp 33-38. -
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Hg Diff Latex
Create a diff pdf for a .tex file with inclusion from hg revision
This python file creates a diff pdf file which contains the diff between the current files and a given revision or the last committed version. I takes an input main file and checks the diff for all the files included in the main file. Currently only supports hg repositories, though if there is any request for git, I'll try and add it. -
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File based backup 52
Content Based File level Data Backup in Python
Content Based File level Data Backup in Python. This is a utility to backup your files. It can do full and incremental backups. It will take a directory as input, and will back up the files in that folder and all sub-folders to the backup destination directory. It can compress each file individually while backing-up. Mirrors the source directory structure under the target directory. Creates 1 archive file for each source file. Even if the backup/restore program or backup database is not available or lost, the backup files and structure can still be recovered. ... -
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Importer library to import assets from different common 3D file formats such as Collada, Blend, Obj, X, 3DS, LWO, MD5, MD2, MD3, MDL, MS3D and a lot of other formats. The data is stored in an own in-memory data-format, which can be easily processed. www.open3mod.com/ is a 3D model viewer and exporter based on Assimp that is also Open Source.
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FineSplice
Enhanced splice junction detection and estimation from RNA-Seq data
FineSplice is a Python wrapper to TopHat2 geared towards a reliable identification of expressed exon junctions from RNA-Seq data, at enhanced detection precision with small loss in sensitivity. Following alignment with TopHat2 using known transcript annotations, FineSplice takes as input the resulting BAM file and outputs a confident set of expressed splice junctions with the corresponding read counts. Potential false positives arising from spurious alignments are filtered out via a semi-supervised anomaly detection strategy based on logistic regression. Multiple mapping reads with a unique location after filtering are rescued and reallocated to the most reliable candidate location. ... -
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Error Propagation Calculator
Easily propagate measurement errors through mathematical operations.
Error Propagation Calculator is essentially a cross-platform GUI front-end for the Python Uncertainties library that does not require knowledge of Python to use. Simply point and click to enter values and errors, input your expression and press compute. The program evaluates native Python code, but the user does not need to know the syntax as common operators are provided as buttons, similar to a scientific calculator. -Evaluate expressions with as much as 26 different variable and error pairs. -Copy output to the system clipboard by simply double clicking the output field. ... -
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DiagSim
Diagnostics simulation for particle accelerators
...Anyway, we use beam data exported from beam trackers, trace the signals through the diagnostics and processing, so that they can be processed as real data, and the input and measured beam parameters can be compared. -
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Binary to Decimal Converter
Converts Binary values to Decimal values!
A simple GUI program that lets you input a Binary value and converts it into a Decimal/Denary value - handy for those who develop at a machine code level! -
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Regression Suite
Test suite with unit regrssion and execution statistics
RegressionSuite is a software test suite that incorporates measurement of the startup lag, measurement of accurate execution times, generating execution statistics, customized input distributions, and processable regression specific details as part of the regular unit tests. Essentially, RegressionSuite provides the frame-work around which the individual unit regressors are invoked (and details and statistics collected). Unit regressors are grouped into named regressor sets (or modules), and regressors are created by implementing specific regressor interfaces. ... -
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Chi Square Calculator
An unlimited calculator for Chi Squared
...This program runs on Python 3.2 ## BUT NO LONGER REQUIRES PYTHON to run! (Now in .exe form!) ## Sorry for the lack of floating point (Decimal) numbers support; attempting to input decimals will crash the program. Will fix soon! If you need any help, information, my email is: max-j-anderson@hotmail.co.uk -
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DictaSim Console
A console-style application for brutal vocabulary memorising
DictaSim Console is a console style application intended to be used for language vocabulary learning. It takes end-user's text files containing foreign words with translation as input and tests his/her knowledge on its content. -
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pyELib
A free open source system to create and manage collections of eBooks
pyELib is a free open source system to create and manage any collection of eBooks. Unlike other eBooks management softwares, pyELib doesn't need the user to input neither titles nor ISBNs, since it automatically analyzes the files and searches for details on the internet. Dupes and different editions are properly handled. Each book is then automatically associated to one or more category (through machine learning) and, if desired, renamed. The library is stored in a MySQL database and comes with an interface for easier management. -
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EnigmaGPG Community
Sending encrypted data through internet web applications.
...Note the utility that can achieve this project because it aims to meet the global need for privacy on the web. Also applies to any web application that allows text input by the user such as social networks, blogs, forums, etc. Very easy in three steps: Send Messages: 1 - Write a messages 2 - With the right mouse button, select enigma cipher 3 - Send the encrypted message Recieve Messages: 1 - Select the message 2 - With the right mouse button, select enigma decrypt Support Tickets: https://sourceforge.net/p/enigmagpg/tickets/ -
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convertToMP4
Easily convert to MP4 with H264 and without all the codec hassle
Convert existing media data (movies or images) to an mp4 movie, with the high performane h264 codec. Usually it takes quite a lot to get the video running as you wish. As convertion engine, Mencoder will be used. This script is intended to ease the creation of videos. It is suitable for the beginner or the lazy advanced people. It will not suite the professional wanting to have full control over all codec parameters. Consider donating to this project:...
