Search Results for "the command line" - Page 17
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Showing 2534 open source projects for "the command line"
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miRge3
Comprehensive analysis of small RNA sequencing data
An update to Python package to perform comprehensive analysis of small RNA sequencing data, including miRNA annotation, A-to-I editing, novel miRNA detection, isomiR analysis, visualization through IGV, processing Unique Molecular Identifieres (UMI), tRF detection and producing interactive graphical output. miRge3.0 is developed in python v3.8 and is a recent update of our previous version miRge2.0. This build includes command line interface (CLI) and cross-platform Graphical User Interface (GUI). For more details refer to documentation link below. -
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lixa
LIXA, LIbre XA, is a free and open source XA transaction manager
LIXA (LIbre XA) is an open source and free Transaction Manager implementing the distributed transaction processing "XA specification" and "TX (transaction demarcation) specification" according to the X/Open CAE Specification. LIXA implements even XTA: XA Transaction API, an innovative API that implements XA transactional context passing among different applications. LIXA is a Transaction Manager but it's not a Transaction Monitor: this is the distinguishing feature of the project. LIXA... -
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Insanely Fast Whisper
An opinionated CLI to transcribe Audio files w/ Whisper on-device
Insanely Fast Whisper is a high-performance command-line tool designed to dramatically accelerate speech-to-text transcription using OpenAI’s Whisper models on local hardware. It leverages modern optimizations such as batch processing, mixed precision, and advanced attention mechanisms like Flash Attention to significantly reduce inference time while maintaining high transcription accuracy. -
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NZMATH
Python Calculator on Number Theory, three-birds-one learning material
...It is freely available and distributed under the BSD license. All programs are written only by Python so that you can easily see their algorithmic number theory. You can get NZMATH with a single command: % python -m pip install -U nzmath Here % is the command line prompt of Windows or Unix/macOS. This release contains several program corrections and additions obtained by writing a programming "notebook" of the book 'Lectures on Elementary Number Theory' (TAKAGI, Teiji) in Python-NZMATH language. The "notebook" is available together. ... -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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FlowChain
Send captured text one line at a time via hotkey
FlowChain is not another clipboard history tool — it's a sequential auto-feed tool built for engineers. Capture a block of multi-line commands or text once, then send it into a target window one line at a time, in order, on demand. Choose your delivery method: standard clipboard paste, or literal keystroke-by-keystroke delivery, which still works over RDP/VNC and in environments where a normal paste doesn't reach the target. Visual sent/unsent tracking, target-window locking, up to 10 tabs, and a global hotkey (Ctrl+Alt+V) keep you focused on the terminal, not on FlowChain itself. ... -
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openSkyMatch
Matches OpenScience Observatories images with astronomical catalogs
openSkyMatch is a collection of Linux shell and Python scripts designed for the OpenScience Observatories program. It automates the identification and matching of detected celestial objects in locally captured FITS images with entries in large-scale sky catalogs, notably Pan-STARRS1 DR2 (II/389/ps1_dr2). The toolkit supports data preprocessing, coordinate correlation, and catalog-based validation of astronomical detections. All tools are open-source and optimized for reproducibility and... -
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sequoia-dap
SEQUOIA ocean data assimilation platform (a SIROCCO suite tool)
***** THIS PROJECT HAS MOVED TO https://gitlab.in2p3.fr/sirocco/sdap/sdap-dev ***** ***** THIS PROJECT HAS MOVED TO https://gitlab.in2p3.fr/sirocco/sdap/sdap-dev ***** ***** THIS PROJECT HAS MOVED TO https://gitlab.in2p3.fr/sirocco/sdap/sdap-dev ***** Within the SIROCCO suite of numerical tools, the purpose of SDAP is to provide a flexible platform to carry out multivariate assimilation of geophysical data in a numerical model. The program is multi-grid (finite differences or finite... -
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Fosite - advection problem solver
numerical simulation code for solving transport equations in 1D/2D/3D
Fosite is a generic framework for the numerical solution of hyperbolic conservation laws in generalized orthogonal coordinates. Its main purpose is the simulation of compressible flows in accretion disks. The underlying numerical solution method belongs to the family of unsplit conservative finite volume TVD schemes. The method is 2nd order accurate in space and uses high order Runge-Kutta and multistep schemes for time evolution. In addition to the pure advection code several source terms... -
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...- �📝 **Action Logging** - All operations are logged to `log.txt` - 🖥️ **GUI Mode** - User-friendly graphical interface with tabs - ⌨️ **CLI Mode** - Traditional command-line interface - 🚀 **Quick Launch** - Start with `main.bat` for easy access
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MrFish
A anti-phishing Python script with headers and proxies!
MrFish is a powerful tool designed to automate the creation of fake account submissions for phishing tests and vulnerability assessments. With the ability to generate random usernames, passwords, and even credit card data, it simulates real user behavior to help test the security of online forms. Featuring customizable settings for proxy support, user inputs (email or username), and multiple threads for speed, MrFish provides an efficient way to stress-test web servers and form-handling... -
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QUI for MPlayer is a QT-based MPlayer GUI. It aims to provide a simple, but effective, frontend for the command-line media player.
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SafeBox
The Best file security app.
A free and Open-Source File Encryption and Decryption app with GUI (Graphical User Interface) and CLI (Command Line Interface) that help you to protect your privacy well using AES (Advanced Encryption System) with your own password and get a single (portable )encrypted file that can share across internet or unsafe places with peace of mind without any data collection or any extra/hidden processes, It also can keep and encrypt the original file name within the file then while decryption (if you ticked the option) it can recover the original file name. ... -
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MBR2
(Pronounced MBR Squared) is a remote control for various boot loaders
MBR2 is a remote control for various Boot Loaders such as GRUB, Limine, etc. It is a series of programs that run on various Operating Systems such as Linux, BSD, MacOS, Windows, etc. These programs all do the same thing from WITHIN THAT OS: They set the values of GRUB, Limine, etc. then restart the computer effectively allowing you to restart in a different OS without waiting for GRUB, etc. to load and make your choice. No more 'missed' choice selection when you get distracted waiting for... -
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PyAppExec
Launcher that prepares Python/deps and runs your app like OS-native
PyAppExec is a cross‑platform open-source launcher and installer that makes Python apps feel native. It locates or installs the required Python runtime, provisions an isolated virtual environment, installs your project’s pip requirements, and handles any external tools requirements or dependencies (e.g., FFmpeg) with version checks and auto-download/extract on Windows/macOS/Linux. The Qt-based installer can scaffold pyappexec.ini, copy/rename the launcher, and (on macOS) bundle a... -
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autofbpost
Semi automate Facebook publishing posts task to groups
Semi automate Facebook publishing posts task to groups 📦Requirements - Windows or Linux operating system - Chromium based browser (Google Chrome, Microsoft Edge, Brave, Opera) - Stable Internet connection 🚀Installation Simply download the executable No additional installation or dependencies are required. Just download and run the executable file 🎮Usage - Windows: Double-click the `.exe` file or run it from the command line - Linux: Make it executable (`chmod +x autofbpost`) and run it (`./autofbpost`) For a detail usage instructions and more, refer to readme (user manual).txt in template folder. | v Template: https://sourceforge.net/projects/autofbpost/files/Template/ Troubleshooting -Antivirus software flagged it / I don't see an executable Add the folder that contains the executable to your antivirus software’s exclusion list https://github.com/otf31/autofbpost -
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Roundup Issue Tracker
Simple-to-use/-install issue-tracking system: web, REST, email, CLI
Roundup is a simple-to-use and -install issue-tracking system with command-line, web, REST, XML-RPC, and e-mail interfaces. It runs on python 2.7 or 3.6 or newer. Roundup has been deployed for: * bug tracking and TODO list management (the classic installation) * customer help desk support (with a wizard for the phone answerers, linking to networking, system and development issue trackers) * issue management for IETF working groups * sales lead tracking ...and so on. ... -
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LocNetServe
A local web server for developing web applications on Windows.
LocNetServe is a web development platform for Windows that helps you build dynamic web applications using Apache 2.4, PHP 8.2, and MySQL 9.4. It installs everything you need to develop web applications easily, thanks to its modern interface. You can manage your server and develop applications without manually editing configuration files. Best of all, LocNetServe is free (under MIT license) and available in a 64-bit version designed for modern Windows systems. -
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AutoViz
Automatically Visualize any dataset, any size
AutoViz is a Python data visualization library designed to automate exploratory data analysis by generating multiple visualizations with minimal code. The primary goal of the project is to help data scientists and analysts quickly understand patterns, relationships, and anomalies within datasets without manually writing complex plotting code. With a single command, the library can automatically generate dozens of charts and graphs that reveal insights into the structure and quality of the... -
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AppInstall (formerly Swiftinstall)
Installer, uninstaller, cleaner, antivirus all in one app for Linux
**DOWNLOAD FROM GITHUB, HERE IS OUTDATED** https://github.com/InledGroup/appinstall Appinstall is a visual installer and package manager for Linux that makes installing, uninstalling, and managing software effortless — no command-line skills required. ✨ Key features: One-click installation of .deb and .appimage packages. Graphical uninstallation for software not listed in app stores. Support for AppImage apps as native applications. Automatic cleanup of unnecessary files to keep your system tidy. Dependency fixing without terminal commands. ... -
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http-proxy-tunnel
Create nested tunnels through HTTP proxies
Http-proxy-tunnel creates TCP tunnels through http proxies that permit the CONNECT method. It differs from other proxy tunnelling programs in that it can tunnel through multiple proxies, and can use SSL tunnels. These abilities mean that in combination with a web server that can proxy (such as Apache) you can serve normal web pages from ports 80 and 443 and connect to the server (using ssh say) via those ports at the same time. All available documentation can be read online at... -
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h2oGPT
Private chat with local GPT with document, images, video, etc.
h2oGPT is an open-source platform that allows users to interact with local GPT models in a completely private environment. It supports a variety of document types, including PDFs, Word files, images, video frames, and even audio, enabling users to query and analyze their documents or engage in a private chat with AI. The platform is designed to be secure and offline, ensuring that all data remains private and under the user's control. h2oGPT supports several AI models, including oLLaMa and... -
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GromacsProSuite
Graphical User Interface for Gromacs
This tool is an integrated graphical interface that simplifies molecular dynamics simulations using Gromacs. It provides a structured, tab-based environment to set up, execute, and analyze simulations data without complex command-line operations. The software automates tasks such as topology generation, solvation, ion addition, minimization, equilibration, and production runs while executing GROMACS commands in the background. Built-in monitoring tracks CPU, RAM, and disk usage to ensure stable performance during parallel processing. Beyond simulation execution, it includes advanced trajectory processing and analysis tools such as RMSD, RMSF, SASA, clustering, PCA, hydrogen-bond analysis, Ramachandran plots, and FEL mapping. ... -
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Datahosting ipfs kubo-cluster
Managed IPFS Kubo pinning with IPFS Cluster replication
This project provides an open-source setup for IPFS Kubo (public and private pinning) combined with IPFS Cluster replication, designed for reliable, production-ready decentralized storage. It is suitable for developers, infrastructure operators, and Web3 projects that need predictable IPFS availability without maintaining complex node infrastructure. The system supports multiple retention plans for IPFS Kubo pinning, allowing users to choose how long data remains pinned, with transparent... -
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Nostalgic Photo DataBase (platform)
Active repository of jpeg & pdf files with customizable tags.
NPDB offers a comprehensive platform for creating and maintaining a database of both old, digitized photos and new snapshots captured by smartphones. This versatile system allows users to organize and search through their collection using customizable tags, catering to images of any vintage. Additionally exists PDF files support. NPDB's flexible tagging system allows users to categorize their files using an arbitrary set of tags tailored to their preferences. This intuitive approach... -
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Mentat
Mentat - The AI Coding Assistant
Mentat is the AI tool that assists you with any coding task, right from your command line. Unlike Copilot, Mentat coordinates edits across multiple locations and files. And unlike ChatGPT, Mentat already has the context of your project, no copy and pasting is required. Run Mentat from within your project directory. Mentat uses Git, so if your project doesn't already have Git set up, run git init. List the files you would like Mentat to read and edit as arguments.