Open Source Physics Software - Page 13
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APBS
Biomolecular electrostatics software
This software has moved to http://www.poissonboltzmann.org/. -
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AQUYNZA is a set of C++ libraries, sample programs and doc's for the modelling, visualization and persistence of 3D environments. Its modular and highly portable. Its primary objective is helping to learn (and teach) computer graphics. (code in SPANISH)!
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Messdatenauswertung für AR65 und WESPHOA Verwendung für die Photoemissionsanlagen der Arbeitsgruppe EES am Institut für Physik der Humboldt-Universität zu Berlin.
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The projects contains detectors drivers & plugins based on EPICS areaDetector module, in addition to the documentation. Currently It consists of the following: 1- areaDetector module base without any devices (Layer 2, which is linked separately as needed), it is distributed under EPICS open license, the module owner is Mark Rivers and it's home page is: http://cars9.uchicago.edu/software/epics/areaDetector.html 2- The following detectors device drivers which was developed at the Australian Synchrotron (www.synchrotron.org.au) by Ahed Aladwan a. Argus-Pan Detector (DM-20-08K10) b. Hamamatsu X-Ray Flat Panel Sensor (C9252DK-14) c. Scint-X (DXI-1100)
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ASEP
Monte Carlo Simulations of Asymmetric Exclusion Processes
Monte Carlo simulations of various classes of asymmetric exclusion processes (ASEP) with open and periodic boundaries. ASEP is a paradigmatic model of non equilibrium statistical mechanics. It can be utilized to model various non-equilibrium phenomena in Biology such as molecular motor transport and protein synthesis. The code's comments will be gradually expanded upon; if there are mistaken or unclear comments they will be corrected. We cannot give an estimation as to when because this is a side-project of ours, and the comments are not crucial to the code's workings. -
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ASEP simulation library
Simulation library for SSEP, ASEP or TASEP simulations
ASEP simulation library is specialized for simulations of Asymmetric Simple Exclusion Processes (ASEP) and its mutations like SSEP or TASEP based on a graph. It is consisted of agents, models, timers and graphs that forms united modelling enviroment ready for computer cluster use - all based on Zarja library. -
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ATOMKI Common Data Acquisition
Nuclear physics data acquisition system
Nuclear physics data acquisition system. The suit of applications can be used to collect data from physics experiments using CAMAC/CAEN/VME devices. The system is quite specialized, but the code can still be useful for others doing something similar... -
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The Accelerator Markup Language (AML) / Universal Accelerator Parser (UAP) project will develop an XML based format for describing high energy particle accelerators along with associated software to convert lattice files to a standard internal struct
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Acoustic Research Tool (ART)
Acoustic Simulation Library for Frequency and Time Domain Simulations.
ART is a flexible simulation framework for wind instruments. It includes a growing library of modelling elements. So far bore discontinuities, branches, tone holes, cylindrical and conical tubes, Bessel horns and bent tubes are available for frequency domain modelling. In the time domain generic bidirectional propagation elements, scattering elements, fractional delays, convolution with reflection functions and general z-domain networks are available and can be described using MuParserX expressions. Cylindrical and conical ducts can also be defined based on their geometry. Available models and their parameters can be enumerated and combined to form simulators for complex acoustical structures. Parameters can be specified symbolically by expressions containing other parameter values or global variables. Dependencies between parameters are resolved at run time. However, MuParserX expressions are compiled at design time. Zero-delay loops are detected and reported. -
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A framework to support scientific experiments: acquiring, visualizing, analyzing, and managing experimental data. Initially developed to support the experimental process on two beamlines at the Canadian Light Source synchrotron (lightsource.ca).
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Physics simulation toys in Java. The focus is on systems simulation:mostly guidance/navigation systems, but also including hydraulic, electrical and life-support.
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Rigid-body simulation software. Provides basic features for building multi-body systems and calculate its motion, forces and impulses.
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Advanced Numerical Instruments 2D
Advanced numerical instruments: adaptive meshing, FE methods, solvers
Ani2D provides portable libraries for each step in the numerical solution of systems of PDEs with variable tensorial coefficients: (1) unstructured adaptive mesh generation, (2) metric-based mesh adaptation, (3) finite element discretization and interpolation, (4) algebraic solvers. -
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Advanced Simulation Library
Free multiphysics simulation software package
Advanced Simulation Library (ASL) is a free and open source multiphysics simulation software package. Its computational engine is based, among others, on the Lattice Boltzmann Methods (http://en.wikipedia.org/wiki/Lattice_Boltzmann_methods) and is written in OpenCL (http://en.wikipedia.org/wiki/OpenCL) which enable extraordinarily efficient deployment (http://asl.org.il/benchmarks) on a variety of massively parallel architectures, ranging from inexpensive FPGAs, DSPs and GPUs up to heterogeneous clusters and supercomputers. The engine is hidden entirely behind C++ classes, so that no OpenCL knowledge is required from application programmers. ASL can be utilized to model various coupled physical and chemical phenomena and employed in a multitude of fields: computational fluid dynamics, virtual sensing, industrial process data validation and reconciliation, image-guided surgery, computer-aided engineering, high-performance scientific computing, etc.. -
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Computational modelling is a interdisciplinary field spanning many techniques and programming languages. AgenTools is a project dedicated to establishing increased modularity in scientific computing packages and a portal linking to other existing project
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Aircraft Trajectory Predictor
Compute Aircraft Trajectories
Compute Aircraft (jet) Trajectories based upon Eurocontrol BADA Aircraft Performance Model -
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Aire
Astrophysical Integrated Research Environment
AIRE (Astrophysical Integrated Research Environment) is a set of computing facilities initiated by Tsinghua Center for Astrophysics , which aims to aid astrophysicists collect, store and analyze data. -
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Almenn Eðlisfræði
A compilation of Icelandic physics problems, will be developed in LaTe
A compilation of Icelandic physics problems, will be developed in LaTeX in collaboration. Nótur og efnisinnihald um eðlisfræði, þróað í LaTeX umhverfinu. Verkefnið er hætt á sourceforge, verið að færa yfir á github undir http://github.com/LainBlaster/FrjalsEdlis -
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AnaLina is a mathematics/physics presentation, visualization and simulation system. It is intended to be used by teachers etc. in classrooms to help in teaching linear algebra and physics (mainly mechanics).
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AnalyzeNNLS
MRI Multiple Echo T2 Analysis
Users load multiecho MRI data and draw ROIs. AnalyzeNNLS creates a T2 distribution from the averaged decay data. Regional fractions and geometric T2 times can be determined. Please reference: Bjarnason TA, Mitchell JR. JMR 206:200-4 (2010). Temporal Phase Correction included in version 2.5. If you use this functionality, please reference: Bjarnason TA, Laule C, Bluman J, Kozlowski P. JMR 232:22-31 (2013). -
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AnharmoniCAOS
Cagliari-Orsay model for anharmonic molecular spectra in 2nd order PT
Given dynamical coefficients and/or derivatives of the ionic potential with respect to normal (harmonic) vibrational modes, compute anharmonic energies and electric dipole-permitted transitions and intensities using nearly-degenerate perturbation theory (i.e. properly accounting for Fermi and Darling-Dennison resonances). -
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AntiGrav simulates the formation of large-scale structures in the universe under the assumption of both attractive and repulsive gravitational forces and an accelerating cosmic expansion.
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AspectR
calculating aspect ratio
Small tool for calculating the aspect ratio of a certain resolution
