Search Results for "gnu/linux" - Page 55
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Showing 7986 open source projects for "gnu/linux"
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ReferenceFree
Scripts for reference free genomic analysis
These are Python scripts plus C/C++ programs for automating the reference free genomic analysis described in: Kua C-S, Ruan J, Harting J, Ye C-X, Helmus MR, et al. (2012) Reference-Free Comparative Genomics of 174 Chloroplasts. PLoS One 7(11). http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0048995 Analytical concept conceived by CHCannon and CSKua. Original script written in Mathematica by CHCannon. -
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This is a firewall and an authenticated gateway script written in perl and bash translating rules to iptables and squid.
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Warning: the koha project lives at http://koha-communty.org and the sourcecode at git.koha-community.org
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LMPC is a tool to manipulate games recordings (demos). Supported games are DOOM, DOOM ][, Heretic, Hexen, DukeNukem3D, Redneck Rampage, Quake, QuakeWorld, Quake2, and Quake III Arena.
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iRecover was developed to aid forensics investigators by combining other commonly used command-line forensics tools into a simple graphical user interface. iRecover provides a GUI interface using the Perl/Tk programming library for forensics examiners to use when retrieving deleted files from an image/ file partition under forensic investigation. Investigators can use this tool to selectively retrieve only certain kinds of files (text, images, video, audio, documents, etc.) for a quick...
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C-Lesh and SMW Engine
C-Lesh is a game programming language for 2D games.
C-Lesh is a game programming language for 2D games - mainly arcade and platform games. When combined with the Super Mario World (SMW) engine you can create awesome 2D platform games like Super Mario World. This language evolved from a "clone" of TI-BASIC which I began developing when I was having memory (segmentation fault) bugs with C. C-Lesh lacks memory allocation and destruction. There is no need to use pointers and you can never get memory leaks or program crashes caused by memory... -
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SecureXChat
Plugin para XChat. cifra el chat privado del IRC haciendolo mas seguro
Plugin para XChat. cifra el chat privado del IRC haciendolo mas seguro utilizando RSA para generar llaves publicas y privadas, las llaves publicas seran intercambiadas con los usuarios para poder cifrar el chat privado. -
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This project aims to develop software around FW4EX, an infrastructure for mechanized grading. Currently five sub-projects exist: a C client for SCiTE, two Java clients for Eclipse and two authoring plugins for Eclipse. And, now, a pair-programming server.
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MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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Voltcraft DL-141TH controller
A tool to download and configure Voltcraft DL-141TH devices.
This is a Perl application enabling downloading and configuring the Voltcraft DL-141TH temperature and humidity sensors device. Targeted at Operating Systems supporting libusb. This application exists thanks to reverse engineering. -
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SchemaForms is a toolkit for building HTML form from an XML data file and an XML-Schema specification. Supports basic data types (string, checkbox, enumeration,..) but is easily extensible to custom data types.
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Automated Test Framework
Automated Test Framework
Automated Test Framework (ATF) is a functional test framework built on top of the existing Perl test harness. Currently it provides a simple interface for running tests in command line/shell environments on local and remote test target systems. The overall goal is to provide a simplified domain specific embedded language for testing. This is being published primarily to accompany a presentation on a test framework being used for verification of various firmware components that must... -
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SVCFRONT
PHP Frontend to SVCMON for IBM SVC and V7000 Storwize
*** This project has been terminated and no further work is planned in the forseeable future - Check out Stor2RRD (http://www.stor2rrd.com/) for an alternative *** A PHP Frontend to SVCMON* that provides a drilldown view to your SVC/Storwize performance data. Linked with FusionCharts and Floatbox it also provides historical graphs of every statistic on the pages. It uses perl scripts to populate some extra information from the SVCs and for pruning and aggregate functions, but the main... -
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Pop-seq
Population simulator to solve next generation sequencing questions
Pop-seq is a perl based simulation tool, for generating any kind of mapping population using an user defined recombination landscapes. Combined with the Seq-sim tool you can generate pooled or bar-coded next generation sequencing biased outcomes. This tool were used to solve reappearing question in a experimental design (e. g. of how many plants or sequencing depth is advisable in a back crossed or out crossed scenario ) -
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TiledImage
TiledImage is a system to browse a large image.
TiledImage is a system to browse a large image. An image of several mega pixels are divided into some tiles and download them by javascript. -
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ImageOverNet
Server/Client for DD over Netcat
This is both a server and client to image over netcat, written in Perl. This was done for a course project. Note that this is not fully functional there are some errors that need to be fixed. I'm no Perl wizard either, so it may be kind of messy. -
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PHP tool to display graphs and stats based on temperature readings stored in MySQL from 1-wire or any source of data. Also supports alarms, mobile access, and logging data from digitemp. Works in any browser.
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vMotion Detector
vMotion Detector for Linux & Windows Platforms
vMotion Detector is an application suite designed for Oracle OEM, Oracle Grid or Nagios that allows a Windows or Linux Guest VM detect when it has its Session ID modified due to an underlying DRS or HA clustered environment change. -
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easyPAC
easy Primer prediction from Alignments and Consensus sequences
Primer prediction from alignments and consensus sequences. easyPAC applies all standard quality tests to degenerate primer and primer pairs and optionally maps all primer candidates to an arbitrary number of reference files like repeat databases or genomes to ensure target specifity. -
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Munin Contrib
Contributed stuff for munin (plugins, tools, etc...)
This repository is the community “extra shelf” for Munin, collecting hundreds of contributed plugins, templates, and helper scripts beyond the official core. Each plugin focuses on graphing a specific metric—from databases and message queues to hardware sensors, web servers, and custom application counters. The collection spans many languages (Shell, Perl, Python, Ruby) and styles, reflecting the breadth of Munin’s user base and the diversity of systems it monitors. While contributions vary... -
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Open-source weather database system for storage of weather/water observations, forecasts, analysis fields, and hindcasts. includes loading program for GRIB files. Visit project website (http://wdb.met.no) for further information. Please note: this project has now moved to http://wdb.met.no
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A set of very optimized tools for indexing/querying huge genomes/files. Provided so far: a very fast exact mapper, and an unconstrained split-mapper
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T-lex
Transposable Element annotation using Next-Generation Sequencing data
The T-lex package contains two pipelines. The T-lex pipeline calls presence/absence of known TE insertions using re-sequencing data. On top of the genotyping, this pipeline also allows to re-annotate TEs and discover traces of transposition events called Target Site Duplication (TSD). The other T-lex pipeline discovers and annotates de novo TE insertions. http://petrov.stanford.edu/cgi-bin/Tlex.html -
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SeqWare has moved to GitHub, see https://github.com/SeqWare SeqWare is a project to create a tool set to work with next generation genome sequencers (SOLiD & Illumina). It includes a LIMS, Pipeline, and Query Engine. Check out the wiki link below to see documentation. You can get the source from the Develop link.
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ValiTerms
Validation of terms in corpus
ValiTerms is a tool that helps the validation of terms in corpus. It finds their occurrences and allows terminologists to choose if a term is relevant or not. ValiTerms is developed at LIPN (http://www-lipn.univ-paris13.fr), RCLN team. Please consult the wiki for instructions about installation and usage.
