Search Results for "proxy software tool" - Page 3
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Showing 266 open source projects for "proxy software tool"
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CRISPR-offinder-v1-2
A CRISPR tool for user-defined protospacer adjacent motif
CRISPR/Cas system undoubtedly holds great potential for genome editing. Target site cleavage by CRISPR technology requires a protospacer adjacent motif (PAM) immediately downstream or upstream of the protospacer element to which the sgRNA binds. However, Cas9 from different types of bacteria or variant recognizes different PAM sequences. To meet the needs of different CRISPR system with specific and efficient sgRNA design, CRISPR-offinder was developed. Given an input FASTA file of the... -
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gablock
Easy Block Diagram Creator using YAML and GraphViz
gablock is a Block Diagram creation tool. Block Diagrams are described in easy-to-write YAML files. These files are translated into the DOT language used by GraphViz. GraphViz is then called to produce a block diagram in any format GraphViz supports, such as PNG, JPEG, SVG, or PDF. -
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FreeBlade is a tool that allows to combine multiple independent linux servers running QEMU/KVM instances into a blade server system. On each node, FreeBlade controls the local virtualcontrol, OpenSAN and httpvnc services in a global context.
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Xcode Shell
shell script that used to auto-build xcode project
xcode_shell is a collection of shell scripts designed to automate common tasks in iOS development, such as building .ipa packages, publishing apps, and managing project assets. Although largely superseded by modern tools like fastlane and fir-cli, this project demonstrates how developers previously streamlined their workflows with custom scripts. The repository includes utilities to compile Xcode projects and workspaces, handle CocoaPods builds, publish .ipa files to private servers or... -
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The Node Director is a tool for managing distributed, hetergeneous UNIX Systems. Its functionality includes System Configuration, Application Distribution, NIS & NIS+ Management, User Creation and Dynamic System Documentation.
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OraMasking
Data masking tool for Oracle database
For Oracle database, mask sensitive data by replacement (static or expression), substitution (synthetic data set is included), random values (Lorum Ipsum) or deletion. Generates update/delete statements or triggers or runs directly against the database. -
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epyunit
PyUnit and PyDev extensions for arbitrary Executables
The package 'epyunit' provides extensions for PyUnit and PyDev. * Extensions for PyUnit - Unittests for arbitrary executables. * Extensions for PyDev - Automation of search and load of pydevd.py The extensions are applicable from commandline and/or within Eclipse. Online manuals: - https://pythonhosted.org/epyunit/ PyPi repository: - https://pypi.python.org/pypi/epyunit Current application examples are: - bash-core - http://bash-core.sourceforge.net Nickname -... -
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SIGAR (System Information Gatherer and Reporter) is a cross-platform, cross-language library and command-line tool for accessing operating system and hardware level information in Java, Perl and .NET.
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DotDotPwn
DotDotPwn - The Directory Traversal Fuzzer
DotDotPwn is a flexible and intelligent fuzzer designed to discover directory traversal vulnerabilities in various software, including HTTP, FTP, and TFTP servers, as well as web platforms like CMSs and ERPs. It supports multiple protocols and can be used in scripting environments. -
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NexStarCtl
Cross platform Perl API to control NexStar compatible telescopes
This module implements the serial commands supported by the Celestron NexStar hand control (HC) and SkyWatcher/Orion SynScan HC. This applies to the Celestron: NexStar GPS, NexStar GPS-SA, NexStar iSeries, NexStar SE Series, NexStar GT, CPC, SLT, Advanced-VX, Advanced-GT, CGE, CGEM etc. SkyWatcher: EQ5, HEQ5, EQ6 (Pro), AZ-EQ5 GT, AZ-EQ6 GT, EQ8 etc. and the corresponding Orion mounts. Communication to the hand control is 9600 bits/sec, no parity and one stop bit via the RS-232 port... -
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PAC is a Perl/GTK replacement for SecureCRT/Putty/etc (linux ssh/telnet/... gui)... It provides a GUI to configure connections: users, passwords, EXPECT regular expressions, macros, etc. You like 'SecureCRT/SSHMenu'? Check this tool and let me know
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ISVASE
identification of sequence variant associated with splicing event
...However, there is little bioinformatics tools to directly identify sequence variants associated with splicing events (SVASE) based on RNA-seq data. We developed ISVASE, a simple and convenient tool for identifying SVASE directly using RNA-seq data. Comparing with the existing software PVAAS, our method has several advantages such as stringent rule-depended filters and statistical filters in each step, detection sequence variants for known splicing events, identification sequence variants in two parts of splicing (junction) separately, detection junction shift events if providing known splicing annotation, evaluating splicing signal, comparing with known DNA mutation and/or RNA editing data, and short running time. -
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MITP
MITP - conserve & novel miRNA identification & target prediction tool
miRNA is a widely known small non-coding RNA which can mediate gene regulation of most important biological processes in plants and animals. Therefore, identification conserve and novel miRNA and their target genes in model and new sequenced species are inevitable. MITP is designed to identify miRNA easily and faster based on sequence mapping result from any mapping software which producing SAM format output result, blast result (default output result) or blat result (default output result).... -
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MGSyn
MGSyn - Automatic Synthesis for Industrial Automation
MGSyn (Model, Game, Synthesis) is an open-source tool which integrates game-based synthesis into model-driven development for industrial control and automation. It is served for research and educational purposes. MGSyn has been originally developed by Department of Informatics (Unit 6), TU München and fortiss GmbH and is now maintained by fortiss GmbH. The software is released under the GNU General Public License Version 3.0 (GPLv3). -
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Cress Tool Suite
Cress is a comprehensive toolset for graphical service/workflow design
Cress (Communication Representation Employing Systematic Specification) allows graphical description of a wide variety of services such as in data communications/telecommunications, but Cress is not limited to this. The approach allows services to be described graphically as (work)flows of activities. Cress diagrams are automatically translated into formal languages for rigorous analysis and verification, and are also automatically translated into implementation languages for deployment... -
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ABTestingGateway
Identify and bypass network-level A/B testing and gateway behavior
ABTestingGateway is a tool developed by China's National Security Research Institute (CNSRE) to identify and bypass network-level A/B testing and gateway behavior often used in censorship systems. It performs dynamic analysis and comparison of network paths to detect content filtering and manipulation strategies employed by intermediate network devices. -
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A perlscript to build source code into programs, like make in purpose but without makefiles. Dynamically finds the dependencies at build time. Build in support for cross-platform programs, multi threaded compiling and distcc.
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ncPRO-seq
Non-Coding RNA PROfiling from sRNA-seq
ncPRO-seq is a tool for annotation and profiling of ncRNAs from smallRNA sequencing data. It aims to interrogate and perform detailed analysis on small RNAs derived from annotated non-coding regions in miRBase, piRBase, Rfam and repeatMasker, and regions defined by users. The ncPRO pipeline also has a module to identify regions significantly enriched with short reads that can not be classified as known ncRNA families. ############# Docker version : download and run Dockerfile (go in... -
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Handy TCP/IP Server/Client Tools
Various TCP/IP servers, clients and network management tools
...Server: - FTP - TFTP - Syslog - Web - Remote Command - General UDP server - Multicast server Client utilities: - Multicast client - TFTP client Starting on version 0.2.0, a powerful network connection tools UBridge is added, it can bridge: - VXLAN (newly released) - UDP sessions - NIC card of the PC - Connections to Cisco Router Simulator "GNS3/dynamips" and H3C Router Simulator (LITO/CEN). UBridge can also be used as a Ethernet over UDP tunnel to remote bridge PC's local NIC, VXLAN, UDP proxy etc. Visit the Wiki page for detail. GUI tools include a network monitoring tool PMON, a SNMP and IP scanner. The project aim is to make them as light weight tools that can be directly executed in command prompt without the need of installation. (Except pmon and UBridge to bridge PC's NIC which require Winpcap). The whole package can be put into USB flash and 伴侶highly portable. -
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must: A More Useful Syslog Test tool
A syslog message generator that replicates real syslog messages
Using templated message formats with customisable placeholders, run in configurable sequences that can selectively reuse data between steps, must allows more intelligent testing of syslog receivers with realistic data, as well as longer soak testing and stress testing. must was created to fill a gap found when trying to stress test Splunk as real, indexable and meaningful data was needed. must will (eventually) be provided as a standalone tool that uses XML configs (for quick use and... -
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IRST LM Toolkit
A toolkit for language modeling.
IRSTLM is no more supported on SourceForge. Please visit the new IRSTLM official website: http://hlt-mt.fbk.eu/technologies/irstlm IRSTLM: A tool for the estimation, representation, and computation of statistical language models. IRSTLM, the IRST Language Modeling Toolkit, features algorithms and data structures suitable to estimate, store, and access very large n-gram language models. Our software has been integrated into a popular open source Statistical Machine Translation decoder called Moses, and is compatible with language models created with other tools, such as the SRILM Tooolkit. -
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RPi-Monitor
Real time monitoring : RPi-Monitor always keep an eye on your computer
RPi-Monitor is a monitoring tool which keep an eye on your computer and can give you the current status and the history of resources usages in a nice looking and interactive web interface. RPi-Monitor is design to be light and powerful and doesn't relies on other software to run. It has been deigned to run on embedded device and consume very few system resources. -
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PhyloTrack
PhyloTrack, D3.js and JBrowse for phylogeny and positioning of samples
PhyloTrack is a JavaScript--based software tool that integrates the D3.js library for data visualization with the JBrowse tool for genome browser representation. It requires a phylogenetic tree of the common Newick data format as input, as well as three meta data files for samples, clade-defining nodes and clade color definitions - all in tab delimited format. Functionality within PhyloTrack shows the informative markers at each node in the phylogenetic tree, therefore highlighting clade-defining polymorphism. ... -
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flickrsync
Command line to to sync photos to Flickr
flickrsync is a command line tool written in Perl that aims to backup a complete directory structure to Flickr. It creates separate albums on Flickr based on the directory structure of the images. The main goal is to upload all pictures without requiring to move them to new folders. It relies on a few Perl packages mainly to handle HTTP requests and the file system. You should create Your own Flickr API keys, authentication token and add them to the application after You have downloaded it. -
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Pipeline Builder for NGS tools
Scripting tool for automatize and managing complex NGS analysis
Handling with NGS tool configuration files is a real challenge for modern biologists and biotechnologist. To increase productivity, specificity and enhance the data processing, this tool provides a collection of commands already structured, leading the user in building the correct pipeline for the data he has to analyse. Pipeline Builder is a scripting tool for managing complex NGS analysis pipelines. It helps the user in composing NGS tool commands and composing his own analysis...
