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Doctor Dok
Doctor Dok is an AI based medical data framework
...All health history - digitalized - accessible anywhere from Mobile or Desktop. Using AI you may translate your health records to one of 50+ languages - making abroad health services more accessible. Doctor Dok uses AI to OCR even a hardly readable photo of your health documents. Then stores it in the cloud with Zero Trust Security architecture (nobody but You can decrypt the data). -
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Monte Carlo eXtreme (MCX)
Physically accurate and validated GPU ray-tracer
MCX is a GPU-accelerated, general-purpose, physically-accurate and feature-rich 3-D light transport simulator. It is one of the fastest simulators because it can use tens of thousands of GPU threads to simulate photons in parallel. -
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XMedCon
medical image conversion utility
a medical image conversion utility & library; hereby hoping to lower at least one barrier in medical research projects. -
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SimThyr
A simulation program for thyroid homeostasis.
SimThyr is a continuous simulation program for the human pituitary-thyroid feedback control system. Applications of this program cover research, including development of hypotheses, and education of students in biology and medicine, nurses and patients. -
MongoDB Atlas runs apps anywhereMongoDB Atlas gives you the freedom to build and run modern applications anywhere—across AWS, Azure, and Google Cloud. With global availability in over 115 regions, Atlas lets you deploy close to your users, meet compliance needs, and scale with confidence across any geography.
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illness index
illness_index A Computer Program of a Medical Textbook.
A computer scientist has attempted to program a textbook of British general practice (primary care) medicine, that is, Hodgkin K (1978) "Towards Earlier Diagnosis....", 4th Edition, Churchill Livingstone. If a patient types presenting findings (such as headache, cough), the program prompts the user for expansion/denial of appropriate findings, in order to construct a list of patient findings. The program also calculates a list of likely diseases, which the user can use the web to find out... -
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kSNP
kSNP4 does SNP discovery and SNP annotation from whole genomes
...Finished and unfinished genomes can be analyzed together, and kSNP can automatically download Genbank files of the finished genomes and incorporate the information in those files into the SNP annotation. No programming skills are required to use kSNP4 Gardner, S.N. and Hall, B.G. 2013. . PLoS ONE, 8(12):e81760.doi:10.1371/journal.pone.0081760 Gardner, S.N., T. Slezak, and B.G. Hall. 2015 Bioinformatics 31: 2877-2878 doi: 10.1093/bioinformatics/btv271 -
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SDC
SDC facilitates development of dist. systems of medical devices.
...It is based on the upcoming SDC standard, which is specified by the IEEE in IEEE Std 11073-20702-2016 (Point-of-care medical device communication Part 20702: Medical Devices Communication Profile for Web Services), IEEE Std 11073-10207-2017 (Point-of-care medical device communication Part 10207: Domain Information and Service Model for Service-Oriented Point-of-Care Medical Device Communication), and P11073-20701 (IEEE Draft Standard for Service-Oriented Medical Device Exchange Architecture & Protocol Binding). The SDC standard has the goal to meet increasing demand for medical device interoperability in an Integrated Clinical Environment (ICE), see also ASTM F2761-1:2009. OpenSDC is not intended to be used in clinical trials, clinical studies, or in clinical routine. -
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OpenVigil
Open pharmacovigilance data extraction, mining and analysis tool
...The OpenVigil web-based analysis tools offer several analysis modes like extraction, filtering, mining of data and analyses via measurements of disproportionality like proportional reporting ratio or reporting odds ratios) and export to spreadsheets programs like Microsoft Excel or statistics programs like R. OpenVigil 1 operates on raw data, OpenVigil 2 on cleaned data (using drugbank.ca and drugs@FDA), OpenVigilFDA uses the official FDA online API. OpenVigil 2 supports query for ATC codes or certain chemical moieties. Other tools of the OpenVigil project include a calculator for measurements of disproportionality for a 2x2 contingency table and a drugname mapper using RxNorm. -
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NUT Nutrition Software
nutrition software to record and analyze what you eat
nut is nutrition software to record what you eat and analyze your meals for nutrient composition. The emphasis is on personal dietary experimentation to determine the best possible diet. The software uses SQLite for a portable, os-independent application. -
Go from Code to Production URL in SecondsSkip the Kubernetes configs. Cloud Run handles HTTPS, scaling, and infrastructure automatically. Two million requests free per month.
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Vital Sign Simulator
Patient vital sign simulator for medical emergency training purposes
...In combination with a (cheap) cpr-manikin, it offers a low-cost alternative to commercial high-tech patient simulation manikins. It is used with a dual monitor system, one monitor with controls for the operator and one providing the vital signs to the trainees. Heart rate, oxygen saturation, etCO2, respiratory rate, blood pressure and various moving ecg-samples can be set and changed at any time by the operator. The trainee-side interface allows automatic/manual defibrillation, cardioversion and pacing. -
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SleepyHead
Open Source CPAP Research and Review Software
Open-source, cross platform, sleep tracking software with a focus on monitoring CPAP treatment. Please see http://sleepyhead.jedimark.net for official release information and latest downloads. -
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fcGENE: Genotype format converter
Format converting tool for genotype Data (e.g.PLINK-MACH,MACH-PLINK)
Main application is twofold: first to convert genotype SNP data into formats of different imputation tools like PLINK MACH, IMPUTE, BEAGLE and BIMBBAM, second to transform imputed data into different file formats like PLINK, HAPLOVIEW, EIGENSOFT and SNPTEST. Readable file formats: plink-pedigree (ped and map), plink-raw, plink-dosage, mach , minimac, impute, snptest, beagle and bimbam. Similarly all kinds of imputation of outputs are also accepted. Formats which can be generated by... -
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Nutrition Tables
Nutrition Investigator
This Nutrition Software consists of easy modifiable tables of selected food nutrients in one file, helps to make an individual diet. The information in this file was obtained from: Source (or Adapted from, as appropriate): Canadian Nutrient File, Health Canada, 2010 and other sources. This file gives an idea of which nutrient could be more likely found in fair quantities in some product. Use that file as a reference tool. -
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UMLS::Query is an umbrella for projects that create measures of semantic similarity for the biomedical domain. Our current project is UMLS-Interface and UMLS-Similarity. Our JBI-2007 article was based on Semantic-Similarity and Snomed-Interface.
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MSTgold
Estimate minimum spanning trees with statistical bootstrap support
Minimum spanning tree (MST) algorithms can generate multiple, equally-minimal, MSTs but MST programs typically report only one, arbitrarily chosen MST. Similarly, most MST programs do not provide statistical metrics to support the credibility of the MSTs that they estimate. MSTgold estimates the number of alternative MSTs, reports up to a user-determined number of those trees, reports a consensus tree, and implements a bootstrapping metric to assess the reliability of alternate MST solutions. ... -
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freehealth
Free and open source Electronic Health Record
...Yes! Go to our Donation page: https://freehealth.io/en/donate Your money will speed up the development process FreeHealth EHR is a fork of FreeMedForms EMR[2] [1]: copyright © 2016 Jerome Pinguet [2]: Copyright (C) 2008-2015 by Eric MAEKER -
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yb Medical Dictionary User Customizable
java8 based yb (creator's name) medical mini dictionary with text file
...Hence, the use of text file for medical data, instead of xml or some database or sql or some hard-to-understand things. Java 8 can be invoked even from usb pen drives. We have used only one .java file which contains the main class. Compiling it yielded only two classes. Thus simplicity is maintained, without any frills. This medical mini dictionary has only some 10,00 sample words, available on internet freely. The data text file and the classes ARE NOT TO BE COMMERCIALISED. User can go on adding his own words by using a text editor such as geany or gedit. -
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What is MedSquare about? Our aim is to create a powerful and flexible modular environment for exploration of medical images, for both medical and scientific purposes.
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Ogles strives to provide an open source data model for neuroscientific data visualization and analytics. Ogles started out as a planning system for frame based stereotactic neurosurgery. Ogles(1) is discontinued. Release candidate (RC) is Ogles2b. Ogles is accompanied by a simple DICOM reader and NIfTI converting tool (Sdr2).
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Analyze My Genes
Compare gene analysis results from 23andme with the human genome
This program compares personal gene analysis results from 23andme with extracted databases from the human genome project. An typical example of an extracted database is a dataset which contains all alternative alleles which occur less than 1% of the time. -
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...This project contains both the data storage server as well as a client / patient UI for accessing the data. Other data access clients can be / have been written, the Oscar EMR is one such client. The sourceforge myoscar-users@lists.sourceforge.net is the main mail list and form of communications for this project. The sourceforge Tickets system is the bug and feature tracker for this project. The sourceforge git repository is not the working code repository, it is only a publishing/readonly code repository for this project. ...
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Hackathon for Outbreak Analysis in R
A hackathon for the analysis of disease outbreaks in R
This is the sourceforge project supporting "Hackout: A hackathon for the analysis of disease outbreaks in R". It includes a repository for the collective development of the project's R package. -
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OpenCFU
An application to count bacterial colonies and other circular objects
...OpenCFU is cross-platform, fast, reliable and allows the user to implement intuitive filters. Additional information is provided on the website: http://opencfu.sourceforge.net/ OpenCFU is published on PLoS ONE: http://www.plosone.org/article/info%3Adoi%2F10.1371%2Fjournal.pone.0054072 -
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Sistema de administración para laboratorio Bioquímico
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medicalcodes
ICD10CM ICD10PCS NDC (Drug Codes USA) LOINC
...It contains more than 460.000 codes useful to various medical fields. Is written in php, javascript, d3.js and is using postgresql as back end. Supports the following Coding Systems: 1. ICD10cm (2014) - Diagnostic Codes. Synonyms search is possible via the Pharmkgb DB and CTD DB - Links to MESH index is provided 2. ICD10pcs (2014) - Procedures Codes 3. CMS Diagnosis 4. CMS procedures list 5. National Drugs Codes (USA). The pharmakological properties of each ingredient are provided from dgrugbank files 6. ...