Showing 5 open source projects for "text database"

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  • 1
    GNAT

    GNAT

    GNAT recognizes gene names in text and maps them to NCBI Entrez Gene

    GNAT is a BioNLP/text mining tool to recognize and identify gene/protein names in natural language text. It will detect mentions of genes in text, such as PubMed/Medline abstracts, and disambiguate them to remove false positives and map them to the correct entry in the NCBI Entrez Gene database by gene ID. March 2017: We started to upload GNAT output on Medline.
    Downloads: 0 This Week
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  • 2

    yb Medical Dictionary User Customizable

    java8 based yb (creator's name) medical mini dictionary with text file

    ...The data text file and the classes ARE NOT TO BE COMMERCIALISED. User can go on adding his own words by using a text editor such as geany or gedit.
    Downloads: 0 This Week
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  • 3

    VarImpact

    Extracting effects of mutations on molecular properties from text.

    Genetic variants alter cellular behavior in a variety of ways, changing biochemical properties of DNA, mRNA, and proteins. Many large-scale sequencing projects are under way to detect human variation in health and disease. Although broad disease associations can be discovered by GWAS studies, the low-level impact of mutations is hardly available in structured form. The results of thousands of small-scale experiments, on the other hand, are present in the literature and discuss observations...
    Downloads: 0 This Week
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  • 4
    CLADlims

    CLADlims

    Web based LIMS for lab animal weight and tumour growth tracking

    ...It is designed to track the weight and tumour growth of the animals, visualize the data, compare data, inform the user for any alarming measurements as well as keep any other data related to animals, cages and experiments. Users can submit the data directly from the measuring facilities to the database using a mobile device (tablet or phone) or any computer with a modern web browser. Multiple tumours per animal can be tracked. With CLADlims you can improve efficiency by getting rid of the text files or spreadsheets and save time and money.
    Downloads: 0 This Week
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  • 5

    Dualword-PMC

    PMC browser

    PubMed Central browser. Source code: http://github.com/dualword/dualword-pmc/
    Downloads: 0 This Week
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