Search Results for "parallel image segmentation"

The MITK Workbench is a free, open-source application for medical image visualization, segmentation, registration, and much more. Beyond the Workbench application, MITK is a comprehensive C++ framework for medical image computing. It provides a modular foundation for extending the MITK Workbench with custom plugins or developing your own medical imaging applications and research prototypes.

InVesalius is a free, open-source medical imaging application designed for three-dimensional reconstruction from computed tomography and magnetic resonance imaging scans. It converts sequences of two-dimensional DICOM images into detailed anatomical models. The software supports medical image visualization, segmentation, and measurement through an interactive graphical environment. Users can isolate tissues using threshold ranges, watershed segmentation, and manual editing tools. It provides high-quality volume rendering and three-dimensional surface generation for examining anatomical structures. Reconstructed models can be exported in formats such as STL, OBJ, and PLY for further processing or 3D printing. ...

3DimViewer is a lightweight 3D viewer of medical DICOM datasets that is distributed as open source software. The viewer is multiplatform software written in C++ that runs on Windows, Mac OS X and Linux systems. 3DimViewer source codes are available on Bitbucket (https://bitbucket.org/3dimlab/3dimviewer). Video tutorials can be found on YouTube (https://www.youtube.com/playlist?list=PLCvwUmKRw9ZO4YexLKEXmw_2jPo-kXVRn).

GIMIAS is a workflow-oriented environment for solving advanced biomedical image computing and individualized simulation problems, which is extensible through the development of problem-specific plug-ins. In addition, GIMIAS provides an open source framework for efficient development of research and clinical software prototypes integrating contributions from the Physiome community while allowing business-friendly technology transfer and commercial product development.

BioImageXD - free open source software for analysis, processing and 3D rendering of multi dimensional, multi data channel, time series image data from microscopy and other sources.

*** This is an archive only, please see https://github.com/ANTsX for this and other ANTsX tools *** Image registration with variable transformations (elastic, diffeomorphic, diffeomorphisms, unbiased) and similarity metrics (landmarks, cross-correlation, mutual information, etc). Image segmentation with priors & nonparametric, multivariate models. *** Current ANTs code, binaries (Mac, Windows, Linux) and support is hosted at Github *** https://github.com/ANTsX/ANTs Docker hub: https://hub.docker.com/u/antsx Older code and binaries remain available here on SourceForge (1.9x, pre 2014). ...

Ezys is a non-linear 3D medical image registration program. Ezys fully exploits the parallel computing power of inexpensive commercial graphics processing units (GPU), resulting in a very fast and accurate program capable of running on desktop PCs and even some laptops. On these systems, non-linear image registrations take less than a minute to complete. Ezys implements a diffeomorphic inverse consistent image registration algorithm with a demons-style regularization based on a non-parametric free form deformation model. ...

The MatrixUser project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MatrixUser/ Most of the medical images (e.g. CT, MRI, PET, etc.) comprises multiple frames which represent slices, phases, timing etc. from the same imaging object. Those images can be saved as multidimensional matrices in Matlab thanks to Matlab's powerful support of multidimensional data representation. However, within Matlab, most of image manipulation functions are limited or...

MITO Leap Motion Fork is a fork of the Medical Imaging TOolkit. It integrate the Leap SDK so that you can interact with the application using hand gestures.

...(J Cereb Blood Flow Metab.2001;21:1034–57) and Oh et al. (J Nucl Med.2012;53:399–406) segmentation. Nonspecific background volume was drawn in the occipital cortex. Terms of use: Striatal Subregional VOImap is intended for free use by the neuroimaging community. However, we do ask that you please cite. J.A. Lojo-Ramírez, F.J. García-Gómez & D. García-Solís. Contact: jalojoram@gmail.com

Parallel Iterative Deconvolution is a multithreaded ImageJ plugin for iterative image deblurring.

Parallel Spectral Deconvolution is a multithreaded ImageJ plugin for spectral image deblurring.

"MITO - Medical Imaging TOolkit" is an open-source, Windows-based software architecture for advanced Medical Imaging. Main characteristics are: DICOM compliant, 2D/3D/S3D visualization, image segmentation and fusion, ROI, advanced 3D user interface

3D medical image platform for visualization and image processing. Segmentation with Levels sets. Surface reconstruction with marching Cubes, texture Mapping and Raycasting,DICOM support. Integration environment for VTK, ITK and vtkInria3D under wxWidgets

SMIT (Scientific & Medical Imaging Tool) assists in image analysis of 3D datasets. It supports image registration, image segmentation, 3D ROI analysis, and least square fitting. Its powerful OpenGL engine displays your data fast and accurately. Enjoy!

Medical Image Computing Workflow (MICFlow) is a simple, easy but flexible, extensible and powerful workflow system to automate medical image computing tasks such as segmentation, registration and analysis. It's pure Python so can be used on any platform

Open Source and Portable object oriented software for 3D digital image segmentation and visualization. Pipes and Filters Architechture. Implemented in C++, and uses FLTK, VTK, ITK, TCL (plugins), and pipeline filters implemented in XML. DICOM support.

OpenVL is a framework for handling, processing & visualizing volumetric data (CT, MRI etc). It provides: powerful data access & layout API, plugins for volume processing tasks (image processing, segmentation etc), and support for multiple file-formats.

The Volume Browser is a graphical tool to navigate 3D Voxel Data. Additional features are: - Segmentation - Color Coding - 3D and 2D Browsing

JisM is a multi-threads program allowing users to perform segmentation's tasks on a picture. Users could add new segmentation methods as JisM's plugins. Plugins can be written in Java or in Python.

The 3D Slicer is freely available, open-source software for visualization, registration, segmentation, and quantification of medical image data. Follow the link for more info: http://slicer.org