Search Results for "python structural engineering" - Page 3

PROJECT MOVED: see http://www.vmtk.org for up-to-date information. Libraries and tools for 3D reconstruction, geometric analysis, mesh generation and surface data analysis in image-based blood vessel modeling.

niftilib is a collection of i/o routines for the nifti1 neuroimage data format. C (nifticlib), Java (niftijlib), Matlab (niftimatlib), and Python (pynifti) code is available. For nifti format info see: http://nifti.nimh.nih.gov/

Website that shows the dynamics of a tumor by solving a system of ordinary differential equations. The results are two kind of graph images, and a gif file, being all of them available for download as a compressed file.

Thi application helps the segmentation of mri brain images into 6 tissue classes by using the T2 neonatal atlas available at http://www.brain-development.org.

Febrl (Freely Extensible Biomedical Record Linkage) does data standardisation (segmentation and cleaning) and probabilistic record linkage ("fuzzy" matching) of one or more files or data sources which do not share a unique record key or identifier.

Application to use MRI brain atlases composed of template images and label images pairs. This application will segment MRI images using labels provided by the atlas. The labels are combined using the voting fusion technique. Please visit our page at http://www.brain-development.org.

PyBact is an open source software written in Python for Bacterial Identification. The software generates simulated data matrix which accurately represents the probabilistic positive/negative results of the tested biochemical test.

The goal of the See&Touch project is to design/implement a special mouse for disabled people, which allows a person to fully control a computer by using just vision and one single body movement. This project develops hardware, firmware and software.

PyExPsiN is a Python crossplatform (Linux/Windows) module for made easy writing psychological experiments. Right now includes functions for DMTS (Delayed Matching to Sample), N-Back, Spatial N-Back, "Grammatical", Mixed Dots, Stroop, and more.

ptsa (pronounced pizza) stands for Python Time Series Analysis. A python module specifically designed with neural data in mind (EEG, MEG, fMRI, etc...), but applicable to almost any type of time series.

PocketAnalyzerPCA combines a geometric algorithm for detecting pockets in proteins with Principal Component Analysis and clustering. This enables visualization and analysis of pocket conformational distributions of large sets of protein structures.

""" E-Cell's source code repository has moved to GitHub! https://github.com/ecell The development of E-Cell now continues on GitHub. The Subversion repository was abandoned. """ E-Cell System is an object-oriented software suite for modeling, simulation, and analysis of large scale complex systems such as biological cells. It allows many components driven by multiple algorithms with different timescales to coexist in a model.

Free-text deidentification tools.

PyTuneSounds is a application that lets the user tune the volumes of sounds in a variety of ways, e.g. to use these in psychoacoustic experiments. It is possible to correct the spectrum of the sound with respect to equipment-inherent filters.

Naimath (syn. blessing) is a project to create tools for diagnosis, management of clinical cases in the form of Rule based Medical Expert System integrating Interactive Health education, Semantified EMR, and serve as a learning tool for students. Website seen at www.naimath.com

This toolkit allows complete control of a microscopy setup from Labview, Matlab, Scilab, Python, .Net, VB, IgorPro, Mathematica and more. Included is a standalone program for image acquisition and scripting control of a scientific microscope.

qips is a software package for analyzing ChIP-seq ("Chromatin ImmunoPrecipitation on sequencing") data. It finds enriched regions of arbitrary lengths and is therefore especially suited for analyzing ChIP-seq of histone marks or polymerase.

The NetEpi project is developing open-source, network-enabled tools for epidemiology and public health practice.

FreeBrain will be an application for the analysis of 2D neurophysiological signals, like heart-rate, EEG or eyemovements. It is aimed at those who want intuitive or free software and those who want a customizeble tool that can handle mixed datasets.

A Python function library to extract EEG feature from EEG time series in standard Python and numpy data structure. Features include classical spectral analysis, entropies, fractal dimensions, DFA, inter-channel synchrony and order, etc.

Inter University Multi-Modal Imaging

EUtils is a python client-side library for querying the NCBI's Entrez life science databases through the NCBI eUtils web services.

FociCounter is a simple and user-friendly program for analysis of gamma-H2AX foci. It allows to determine the number of foci in a single cell, a foci intensity as well as a cell intensity.

With this Python module (based on C++ code) it is possible to create a Brain Comp. Interface (BCI) and herewith to get EEG data online and evaluate the data while receiving it. - Up to now, this tool relies on the Brain Vision Rec. as EEG software -

A real-time open source alcohol absorption and metabolism simulator for S60 3rd edition mobile phones. Can plot BAC graphs, predefined drinks, sobering-up time estimation and much more!