Search Results for "fast linux"
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Showing 44 open source projects for "fast linux"
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RLaB is an interactive, interpreted scientific programming environment which provides fast prototyping and program development. Its syntax is a combination of c (curly brackets for blocks of statement, some statements) and fortran/matlab (c) (indexing of arrays starts from 1, naming of the functions). Project rlabplus provides second update to RLaB2 and third release RLaB3 of the environment for 32- and 64-bit linux systems.
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segyio
Fast Python library for SEGY files
Segyio is a small LGPL-licensed C library for easy interaction with SEG-Y and Seismic Unix formatted seismic data, with language bindings for Python and Matlab. Segyio is an attempt to create an easy-to-use, embeddable, community-oriented library for seismic applications. Features are added as they are needed; suggestions and contributions of all kinds are very welcome. -
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TIGRE
TIGRE: Tomographic Iterative GPU-based Reconstruction Toolbox
TIGRE is an open-source toolbox for fast and accurate 3D tomographic reconstruction for any geometry. Its focus is on iterative algorithms for improved image quality that have all been optimized to run on GPUs (including multi-GPUs) for improved speed. It combines the higher-level abstraction of MATLAB or Python with the performance of CUDA at a lower level in order to make it both fast and easy to use. TIGRE is free to download and distribute: use it, modify it, add to it, and share it. Our... -
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Armadillo
fast C++ library for linear algebra & scientific computing
* Fast C++ library for linear algebra (matrix maths) and scientific computing * Easy to use functions and syntax, deliberately similar to Matlab / Octave * Uses template meta-programming techniques to increase efficiency * Provides user-friendly wrappers for OpenBLAS, Intel MKL, LAPACK, ATLAS, ARPACK, SuperLU and FFTW libraries * Useful for machine learning, pattern recognition, signal processing, bioinformatics, statistics, finance, etc. * Downloads:... -
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LabPlot
Data Visualization and Analysis
LabPlot is a FREE, open source and cross-platform Data Visualization and Analysis software accessible to everyone. -
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A Matlab/Octave toolbox to design, simulate, and analyze optical communication systems. Open-source, fast, user-friendly, and customizable, it includes cutting-edge solutions for modulation formats generation, performance estimation, optical fiber propagation. See more at https://optilux.sourceforge.io.
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iElectrodes
intracranial electrodes localization toolbox
iElectrodes is a free and open-source Matlab® toolbox to obtain intracranial electrode coordinates from MRI and CT images. Precise and reliable localization can be achieved fast and in a semiautomatic way with minimal user intervention. The toolbox works with ECoG (subdural grids and strips) and SEEG (depth) electrodes. The new GridFit algorithm can precisely localize high-density electrodes (up to 3mm). Brain parcellations (atlas) and surfaces can be imported to aid 2D and 3D... -
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GetData
Scientific Database Format
The GetData library provides an API to interface with Dirfile databases. The Dirfile database format is designed to provide a fast, simple, scalable format for storing and reading binary, synchronously-sampled, time-ordered data. -
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TauFactor
MatLab App for calculating the tortuosity factor of microstructure
Please contact the author at sjc08@ic.ac.uk for any questions or if you wish to cite this application in a academic study. Journal paper available here: http://www.sciencedirect.com/science/article/pii/S2352711016300280 TauFactor is a MatLab application for efficiently calculating the tortuosity factor, as well as volume fractions, surface areas and triple phase boundary densities, from image based microstructural data. The tortuosity factor quantifies the apparent decrease in... -
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TracTrac
Massive Object Tracking Software (Matlab/Python)
TracTrac is a Particle Tracking Velocimetry (PTV) software which is extremely fast (more than 10k points tracked per second, 100k under python) and accurate (up to 0.01 pixel resolution), forming thus a good concurrent to the state-of-the art PIV/PTV algorithms. It allows to track anything that moves: birds, ants, grains, water flows... It runs on Python (v2&3) or Matlab (>2012a with Image Processing toolbox). Give it a try ! Get the last sources on GitHub:... -
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DSeg software
A MATLAB program to segment filamentous bacteria and hyphae structures
The analysis of microscopy image has been the basis to our current understanding of the cellular growth and morphogenesis. The quantitative evaluation of morphological changes in the biological processes is therefore important to characterize cell structures. Here we present an image analysis tool DSeg to overcome the difficulties in finding complicated elongated cell shapes by using time-lapse data and cell morphological constraints. A fast binary level-set based algorithm is implemented... -
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OpenOCL Matlab
Optimal control, trajectory optimization, model-predictive control.
The Open Optimal Control Library is a software framework in Matlab/Octave for modeling optimal control problem. It uses automatic differentiation and fast non-linear programming solvers. It implements direct methods. In the backend it uses CasADi and ipopt. -
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Faster R-CNN
Object detection framework based on deep convolutional networks
This repository provides a MATLAB / Caffe re-implementation of the Faster R-CNN object detection framework (originally from Ren et al. 2015). The Faster R-CNN architecture combines a Region Proposal Network (RPN) with a Fast R-CNN style detection network to share convolutional feature maps and thus speed up detection. The repo includes code to train, test, and deploy Faster R-CNN models under the MATLAB / Caffe environment, example configuration files, and model checkpoints. Multiple... -
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This project aims to develop and share fast frequent subgraph mining and graph learning algorithms. Currently we release the frequent subgraph mining package FFSM and later we will include new functions for graph regression and classification package
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PSIworx
Data processing for the PSI fluorometer
PSIworxR (R) and PSIworx (MATLAB) are a collection of functions and scripts to analyze data from the PSI SuperHead Fast Fluorometer series (www.psi.cz). These fluorometers are used in limnology and oceanography research communities. The program retrieves parameters from single turnover induction and relaxation. Results are returned as text files and PDF figures. -
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R-FCN
R-FCN: Object Detection via Region-based Fully Convolutional Networks
R-FCN (“Region-based Fully Convolutional Networks”) is an object detection framework that makes almost all computation fully convolutional and shared across the image, unlike prior region-based approaches (e.g. Faster R-CNN) which run per-region sub-networks. The repository provides an implementation (in Python) supporting end-to-end training and inference of R-FCN models on standard datasets. The authors propose position-sensitive score maps to reconcile the need for translation variance... -
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HashingBaselineForImageRetrieval
Various hashing methods for image retrieval and serves as the baseline
This repository provides baseline implementations of deep supervised hashing methods for image retrieval tasks using PyTorch. It includes clean, minimal code for several hashing algorithms designed to map images into compact binary codes while preserving similarity in feature space, enabling fast and scalable retrieval from large image datasets. -
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MRiLab
A Numerical MRI Simulation Platform
The MRiLab project is moving to GitHub, the latest version can be obtained from https://leoliuf.github.io/MRiLab/ The MRiLab is a numerical MRI simulation package. It has been developed and optimized to simulate MR signal formation, k-space acquisition and MR image reconstruction. MRiLab provides several dedicated toolboxes to analyze RF pulse, design MR sequence, configure multiple transmitting and receiving coils, investigate magnetic field related properties and evaluate real-time... -
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Edges
Structured Edge Detection Toolbox
Structured Edge Detection (Edges) is a MATLAB toolbox implementing the structured forests method for fast and accurate edge detection (up to ~60 fps in many settings). The toolbox also includes the Edge Boxes object proposal method, fast superpixel generation, and utilities for training, evaluation, and integration with vision pipelines. High performance (frames per second performance depending on settings). Integration with MATLAB and compatibility with external vision pipelines. Fast edge... -
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Toastpp
Forward and inverse modelling in optical tomography
Toast++ is a C++ software package for modelling light transport in scattering media using the finite element method. It allows 3D reconstruction of absorption and scattering distributions inside an object from boundary measurements of light transmission, using steady state, time domain or frequency domain information. Matlab and Python bindings exist for ease of use and fast prototyping. -
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RAFTS3
Rapid Alignment Free Tool for Sequences Similarity Search
RAFTS3 can perform high-speed protein search comparisons locally using a desktop computer or laptop. RAFTS3 performed searches many times faster than those with BLASTp against large protein databases such as NR and Pfam, with a small loss of sensitivity depending on the similarity degree of the sequences. RAFTS3 is a new alternative for fast comparison of protein sequences, genome annotation and biological data mining. Preprint: http://dx.doi.org/10.1101/055269 Precomputed databases... -
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GI-ICA
Matlab implementation of GI-ICA and PEGI
This is a matlab implementation of the GI-ICA algorithm for ICA in the presence of an additive Gaussian noise. The algorithm is discussed in the paper "Fast Algorithms for Gaussian Noise Invariant Independent Component Analysis" by James Voss, Luis Rademacher, and Mikhail Belkin. -
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JAABA
The Janelia Automated Animal Behavior Annotator
The Janelia Automatic Animal Behavior Annotator (JAABA) is a machine learning-based system that enables researchers to automatically compute interpretable, quantitative statistics describing video of behaving animals. Through our system, users encode their intuition about the structure of behavior by labeling the behavior of the animal, e.g. walking, grooming, or following, in a small set of video frames. JAABA uses machine learning techniques to convert these manual labels into behavior... -
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Repository moving to https://github.com/cmendl/fermifab ! A quantum physics toolbox for small fermionic systems. Keywords: quantum mechanics, reduced density matrices, Slater determinants, second quantization, creation and annihilation operators
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MATSLISE
Matlab package for the numerical study of Sturm-Liouville problems
MATSLISE is a graphical Matlab software package for the interactive numerical study of Sturm-Liouville problems. It allows the fast and accurate computation of the eigenvalues and the visualization of the corresponding eigenfunctions by making use of the power of high-order piecewise constant perturbation methods, also called the CP methods
