Search Results for "model-builder"
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Showing 115 open source projects for "model-builder"
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broom
Convert statistical analysis objects from R into tidy format
broom is part of the tidymodels ecosystem that converts statistical model outputs (e.g. from lm, glm, t.test, lme4, etc.) into tidy tibbles — standardized data frames — using functions tidy(), glance(), and augment(). These are easier to manipulate, visualize, and report programmatically. -
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OR-Tools - Google Optimization Tools
Google's software suite for combinatorial optimization
...This suite contains a number of solvers, namely: a constraint programming solver; a linear programming solver; wrappers for commercial solvers (like Gurobi or CPLEX) and other open source solvers (SCIP, GLPK, etc.); among others. OR-Tools is written in C++, but comes with wrappers for Python, C# and Java. Once you model your problem in your preferred programming language, you can then use any of OR-Tools’ available solvers. OR-Tools is an award-winning project, having won three gold medals in the 2020 MiniZinc Challenge, the international constraint programming competition. -
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CausalImpact
An R package for causal inference in time series
The CausalImpact repository houses an R package that implements causal inference in time series using Bayesian structural time series models. Its goal is to estimate the effect of an intervention (e.g. a marketing campaign, policy change) on a time series outcome by predicting what would have happened in a counterfactual “no intervention” world. The package requires as input a response time series plus one or more control (covariate) time series that are assumed unaffected by the... -
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MCM-ICM
Mathematical Contest resources
MCM-ICM is a curated archive of Outstanding Winner (“O-奖/特等奖”) solution papers from the Mathematical Contest in Modeling and the Interdisciplinary Contest in Modeling, spanning the early 2000s through recent years. The repository is organized by year, with per-year folders that collect the top-ranked reports and, in later years, additional materials such as problem statements or problem notes when available. It has evolved from a single-maintainer project into a collaborative effort, with... -
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statsmodels
Statsmodels, statistical modeling and econometrics in Python
...Generalized linear models with support for all of the one-parameter exponential family distributions. Markov switching models (MSAR), also known as Hidden Markov Models (HMM). Vector autoregressive models, VAR and structural VAR. Vector error correction model, VECM. Robust linear models with support for several M-estimators. statsmodels supports specifying models using R-style formulas and pandas DataFrames. -
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Data Envelopment Analysis using Stata
Develop a user written Data Envelopment Analysis package in Stata.
...We call the program package "DEAS" which stands for Data Envelopment Analysis using Stata. DEAS covers the basic models of DEA and extensions including CCR, BCC, SBM, Super-efficiency Model, Allocative Model(Profit, Revenue, Cost), (Global) Malmquist Productivity Index Model, Imprecise DEA, FDH, Additive Model, Virtual Price Model, linear programming(lp), mixed integer linear programming(MILP), and more. * Book "A Handbook of Data Envelopment Analysis using Stata" published in Amazon : https://www.amazon.com/-/ko/dp/B0FH6N3168/ref=tmm_hrd_swatch_0 -
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Uyamak
Numerical simulation software similar to MatLab-Simulink
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CRC RevEng
Arbitrary-precision CRC calculator and algorithm finder
...CRC RevEng also reverse-engineers any CRC algorithm from sufficient correctly formatted message-CRC pairs and optional known parameters. It comprises powerful input interpretation options. Compliant with Ross Williams' Rocksoft(tm) model of parametrised CRC algorithms. -
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NAVAL-SEM
Free offline SEM software with HTMT, bootstrapping & exports
...Designed for researchers, PhD scholars, professors, students, and analysts, it enables advanced quantitative research without subscriptions, cloud dependencies, or proprietary software restrictions. Key features include visual drag-and-drop model building, bootstrapping, mediation analysis, HTMT, AVE, Composite Reliability (CR), Cronbach's Alpha, model fit assessment, and Multi-Group Analysis (MGA). NAVAL-SEM also supports export to R, Python, and Lavaan for reproducible research workflows. Built for academic and professional research, NAVAL-SEM helps users conduct scale validation, measurement assessment, and structural modeling across disciplines including marketing, management, psychology, education, healthcare, and social sciences. ... -
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MathMod
MathMod is a mathematical modeling software
MathMod is a portable interactive plotting and graphing program for Windows, Linux, MacOSX and many other platforms. MathMod allows to plot 3D mathematical surfaces, described by implicit or parametric equations, and offers a very large database of model samples that can be generated with it. It's Free and Open Source. Change-log for MathMod-13.0 (15/11/2025) 1) Scripts generator to add thickness to iso/parametric surfaces 2) Undo/Redo commands for navigating through previous scripts 3) New scripts, Bug-fixes, code optimization and documentation update For a complete list of changes made during the course of development, please visit: https://github.com/users/parisolab/projects/2 -
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Bayes+Estimate is a Rust and C++ library that implement numerical algorithms for Bayesian estimation. They provide tested and consistent numerical methods and represents the wide variety of Bayesian estimation algorithms and system model.
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MCPower
MCPower — simple Monte Carlo power analysis for complex models
MCPower-GUI is a desktop application that provides a graphical interface for the MCPower Monte Carlo power analysis library. It guides users through the full workflow across three tabs: Model setup (formula input with live parsing, CSV data upload with auto-detected variable types, effect size sliders, and correlation editing), Analysis configuration (find power for a given sample size or find the minimum sample size for a target power, with multiple testing correction and scenario analysis), and Results (interactive charts, exportable tables, and auto-generated Python replication scripts). ... -
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Optimizer_sovkov
Constructing and optimizing general mathematical and physical models
...The convenient visual interface and the detailed manuals are provided. The main benefit of the package is its capability to construct models of any level of complexity in a block-by-block manner. Elementary model blocks can be collected in libraries, and we have already written many such library programs. Many of these programs are already available along with the main package. Currently, the main focus of these is computational quantum mechanics, analysis and simulation of molecular spectra, and general-purpose approximants. The package provides the most reliable modern strategies for linear and non-linear model optimization, regularization, and hypothesis tests. ... -
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OpenSIMPLY
Discrete-event simulation modeling software for science and education
...Some application of this modeling software are: - traffic simulation - network simulation, - emergency and evacuation ways simulation and much more. This simulation tool runs in Windows and Linux, on 32-bit and 64-bit platforms, as a GUI or console (terminal) application. Write the model only once, simulate anywhere. Videos on installing OpenSIMPLY for different IDEs and operating systems : https://www.youtube.com/playlist?list=PLnyWoktGqA -
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...Change-log for MathMod-11.1 (16/06/2021) 1) Support of graphing functions with complex numbers Z=u+iv in 3D and 4D spaces (demo scripts: "Complex3D_xx" and "Complex4D_Saddle") 2) Added support for HSV (hue, saturation, brightness) coloring model (script: "Complex_Domain_Coloring") 3) Texture definitions (RGB and HSV) for parametric surfaces can now be expressed as functions of complex numbers 4) Added a software implementation for the OpenGL variable gl_FrontFacing (fixed an issue with GPU drivers on MacOSX Catalina). The activation of this patch is available from mathmodconfig.js ("OpenGlConfig"-->"GL_FrontFacingSupport"=false) or the GUI("Appearance"-->"OpenGL Front Surface Support") 5) Bug-fixes, code optimization and documentation update.
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UnBBayes
Framework & GUI for Bayes Nets and other probabilistic models.
UnBBayes is a probabilistic network framework written in Java. It has both a GUI and an API with inference, sampling, learning and evaluation. It supports Bayesian networks, influence diagrams, MSBN, OOBN, HBN, MEBN/PR-OWL, PRM, structure, parameter and incremental learning. Please, visit our wiki (https://sourceforge.net/p/unbbayes/wiki/Home/) for more information. Check out the license section (https://sourceforge.net/p/unbbayes/wiki/License/) for our licensing policy. -
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Generic data-assimilation toolbox written in java, with native (c and fortran) libraries for high performance computing. Provides tools to couple to your own model and a wide range of algorithms, ranging from parameter calibration to Kalman filters.
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rethinking
Statistical Rethinking course and book package
This R package accompanies Richard McElreath’s Statistical Rethinking (2nd edition), offering utilities to fit and compare Bayesian models using both MAP estimation (quap) and Hamiltonian Monte Carlo via RStan (ulam). It supports specifying models via explicit distributional assumptions, providing flexibility for advanced statistical workflows. -
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MAGeCK
Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout
MAGeCK2 is here: https://github.com/davidliwei/mageck2 Model-based Analysis of Genome-wide CRISPR-Cas9 Knockout (MAGeCK) is a computational tool to identify important genes from the recent genome-scale CRISPR-Cas9 knockout screens technology. For instructions and documentations, please refer to the wiki page. MAGeCK is developed by Wei Li and Han Xu from Dr. Xiaole Shirley Liu's lab at Dana-Farber Cancer Institute/Harvard School of Public Health, and is maintained by Wei Li lab at Children's National Medical Center. ... -
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OpenCL(tm) Solar System Simulation
An OpenCL Solar System simulation
OpenCL is a trademark of Apple Inc., and is used under license by Khronos Uses OpenCL to accelerate the integration of a large number of solar system bodies. Video at http://youtu.be/xp2Qyar3krI Rogue Star simulation http://www.youtube.com/watch?v=2dJEhPYfJ5U Discussion at http://forum.beyond3d.com/showthread.php?p=1766406 -
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Python/FEniCS Examples
phase-field simulation and other examples with Python/FEniCS
The main goal of this project was developing phase-field simulations of lithium dendrite growth with FEniCS programmed in Python. The problem was based in the grand potential-based model of Zijian Hong and Venkatasubramanian Viswanathan (https://doi.org/10.1021/acsenergylett.8b01009) . Some simpler examples were developed before for a first approach with FEniCS: heat equation and combustion model. -
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FRUITS
Food Reconstruction Using Isotopic Transferred Signals
Description IMPORTANT NOTICE: The current release of FRUITS (FRUITS 3.1) will be the last as a Windows installer. This version is the closest to the soon to be released R-based ReSources package as part of the IsoMemo initiative. FRUITS is a Bayesian mixing model for diet reconstruction using isotopic data. -
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gsasnp2
PubMed ID: 29562348 / DOI: 10.1093/nar/gky175
* GSA-SNP2 is a successor of GSA-SNP (Nam et al. 2010, NAR web server issue). GSA-SNP2 accepts human GWAS summary data (rs numbers, p-values) or gene-wise p-values and outputs pathway genesets ‘enriched’ with genes associated with the given phenotype. It also provides both local and global protein interaction networks in the associated pathways. * Article: SYoon, HCTNguyen, YJYoo, JKim, BBaik, SKim, JKim, SKim, DNam, "Efficient pathway enrichment and network analysis of GWAS summary data... -
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dupost
Dual Porosity Stokes model implemented with FEniCS
A coupled dual porosity Stokes model implemented with FEniCS. References: 1. C. Douglas, X. Hu, B. Bai, X. He, M. Wei and J. Hou, "A Data Assimilation Enabled Model for Coupling Dual Porosity Flow with Free Flow," 2018 17th International Symposium on Distributed Computing and Applications for Business Engineering and Science (DCABES), Wuxi, 2018, pp. 304-307. -
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SuperShaper
A tool that uses OpenCL to procedurally generate 3D models
The SuperShaper is an interactive tool to manipulate 3D meshes created from a "Trigonometry Formula" in real-time. The created mesh of up to a million vertices can be morphed interactively. The model is displayed in 3D, allowing customising the rendering. Export to 3DS and OBJ file formats is supported.
