Mathematics Software

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  • 1
    D-Cog (Declarative-Cognition) is a Java based framework for training software components (reusable, object-oriented, interface-driven components). Instead of programmed, software components are trained by example to get the expected results.
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  • 2
    DANNU - Database Artificial Neural Network Utility. A C#/.NET utility implementing the "NeuroBox" library which allows the user to import data from a database and train a network with it. A fully featured NN utlitility is envisioned.
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  • 3
    C++ implementation of the DAWG and trimmed DAWG data structures. Supports basic string searching.
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  • 4
    Custom algebra simplification and rearrangement. 2d, 3d Graphing, numeric evaluation, excact and approximate, exporting to text, HTML and latex-source. ANSI-C, stand-alone.
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  • 5
    A freeware Qt based project which targets a Calculator which has views of bin/dec/hex in the same window. I have missed this feature in legacy calculators and some of the colleagues asked about it too, hence the origin of the idea.
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  • 6
    DD-AVX

    DD-AVX

    DD-AVX: Library of high-precision operations accelerated by AVX

    DD-AVX: Library of high-precision operations accelerated by AVX. author's page http://www.slis.tsukuba.ac.jp/~s1530534/index.html e-mail hishinuma@slis.tsukuba.ac.jp Double-Double (DD) precision operations are used to reduce rounding errors and improve the convergence of Krylov subspace methods. This library has Double-Double precision operations accelerated by AVX and AVX2. AVX and AVX2 are intel SIMD instructions. They operate four double precision operation simultaneously. This library needs to merge "Lis" for DD precision iterative solvers. Official support "Lis" version is "lis-1.4.58." After merge "lis" and "DD-AVX," the interface is same as "lis." Lis web page http://www.ssisc.org/lis/index.en.html This library is managed by git. old version can search "code" page.
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  • 7
    DD-AVX ver.2

    DD-AVX ver.2

    Library of High Precision Sparse Matrix Operations Accelerated by AVX

    ....hogehoge
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  • 8

    DEAPathways

    Differential Expression Analysis for Pathways

    This project contains the source code associated with the PLoS Computational Biology publication: "Differential Expression Analysis for Pathways". The paper text can be found here: http://www.ploscompbiol.org/article/info%3Adoi%2F10.1371%2Fjournal.pcbi.1002967
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  • 9
    DEBay

    DEBay

    Deconvolutes qPCR data to estimate cell-type-specific gene expression

    DEBay: Deconvolution of Ensemble through Bayes-approach DEBay estimates cell type-specific gene expression by deconvolution of quantitative PCR data of a mixed population. It will be useful in experiments where the segregation of different cell types in a sample is arduous, but the proportion of different cell types in the sample can be measured. DEBay uses the population distribution data and the qPCR data to calculate the relative expression of the target gene in different cell types in the sample. The user manual of DEBay: https://sourceforge.net/projects/debay/files/UserManual.pdf Sample data: https://sourceforge.net/projects/debay/files/Test_data/ Citation Information: Vimalathithan Devaraj, Biplab Bose. DEBay: A computational tool for deconvolution of quantitative PCR data for estimation of cell type-specific gene expression in a mixed population. Heliyon, 2020, 6(7), e04489. https://doi.org/10.1016/j.heliyon.2020.e04489
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  • 10
    Smalltalk numerical analysis codes based on Didier Besset's "Object-Oriented Implementation of Numerical Methods: An Introduction with Java & Smalltalk", 2000, Morgan Kaufmann Publishers.
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  • 11
    2D, 3D object indexes (Quadtree, Octree, Quadtree with object radius indexation), fast geometry find functions, template classes with embedded 2D, 3D indexation and fast search features.
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  • 12
    DLog is an Description Logic ABox reasoner that uses resolution. The basic idea is that a DL knowledge base is transformed into a Prolog program without any knowledge on the content of the ABox. The answers are obtained during normal Prolog execution.
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  • 13
    A project for matrix operation library made by Reactor Physics Labratory, Seoul National University
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  • 14
    Software to cluster protein sequences into functionally similar groups. Journal reference: http://bioinformatics.oxfordjournals.org/cgi/content/short/24/16/1765
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  • 15
    The DUNS (Diagonalized Upwind Navier-Stokes)code is a 2D/3D, structured, multi-block, multi-species,reacting, steady/unsteady, Navier Stokes fluid dynamics code with q-omega turbulence model. It currently uses a diagonalized ADI procedure with upwind diff
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  • 16
    A .Net Library that lets you make full use of multi-core and multiprocessor computers. It is very efficient, and easily integrated into existing applications. It is modeled after the Parallel FX usage model, and is faster than the PFX too.
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  • 17
    Java library useful for representing abstract mathematical structures such as rings, groups, ideals, and sets.
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  • 18
    Dancing Networks attempts to create self-drawing diagrams by applying the laws of motion as we know them today. The process of the diagrams drawing themselves looks like a network that starts its dance in chaos but gravitates toward harmony and order.
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  • 19
    A Calculator for Geometry purposes, has commons functions.
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  • 20

    Dantzig-Wolfe Solver

    An implementation of Dantzig-Wolfe decomposition built upon GLPK

    An implementation of Dantzig-Wolfe decomposition built upon the GNU Linear Programming Kit. This is a command line tool for solving properly decomposed linear programs. There are several examples and some documentation to guide the use of this solver. Forked over to GitHub (see link).
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  • 21
    Dasema is a compact C++ library for interpreting mathematical formula and applying them to data points/sets. It supports multiple variables and comes with a tool for benchmarking, a C++ GNU-like frontend as proof-of-consept and SWIG interface to Python.
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  • 22
    *** This page is no longer used by the Dasher project - please see http://www.inference.phy.cam.ac.uk/dasher/ *** Dasher is a data entry interface incorporating language modelling and driven by continuous two-dimensional gestures, e.g. a mouse, a stylus
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  • 23
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  • 24
    Data Envelopment Analysis using Stata

    Data Envelopment Analysis using Stata

    Develop a user written Data Envelopment Analysis package in Stata.

    The goal of this project is to develop a Data Envelopment Analysis(DEA) program using Stata programming language. This is the replacement of "deastata" project that we maintained for the purpose of version management. We call the program package "DEAS" which stands for Data Envelopment Analysis using Stata. DEAS covers the basic models of DEA and extensions including CCR, BCC, SBM, Super-efficiency Model, Allocative Model(Profit, Revenue, Cost), (Global) Malmquist Productivity Index Model, Imprecise DEA, FDH, Additive Model, Virtual Price Model, linear programming(lp), mixed integer linear programming(MILP), and more. * Book "A Handbook of Data Envelopment Analysis @ Stata" published in Amazon : https://a.co/d/iUfeFTv
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  • 25
    Data Matrix

    Data Matrix

    Java Api to manipulate simple on data of Matrix Type

    Java Api to manipulate simple on data of Matrix Type. There is lot of usefull methods like resize, insert , remove, sort and lot of other methods. Usefull methods to manipulate with diagonals. For example you can create block diagonal matrix. There is lot of usefull methods to manipulate on mathematic matrix also, like determinant , norm , minor , cofactor , solveLienarSystem , arithmetic operations also and lot more.
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