Open Source Linux Machine Learning Software - Page 14
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Machine Learning Software for Linux
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Isolation Forest detects data-anomalies using binary trees. Platform: R (www.r-project.org) Reference: Fei Tony Liu, Kai Ming Ting, and Zhi-Hua Zhou, “Isolation Forest”, IEEE International Conference on Data Mining 2008 (ICDM 08)
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Swarm Wars
Safety in numbers.
REPOSITORY MOVED TO GITHUB: https://github.com/happyjack27/SwarmWars video sample: http://youtu.be/s5mLNbdBQGY A game where you evolve & compete AI swarms. The organisms use swarm intelligence & ant colony optimization. The organisms can communicate through 3-color signaling as well as by laying beacons. They can attack and repair other organisms. They can select mates, and they can gather and distribute food and material. This behavior is controlled by a genetically evolved neural net augmented with online back propagation learning. The back propagation learning uses a reward vector and plasticity matrix that is evolved as part of the genome. Long story short, the AI is pretty frickin' sophisticated. Players can take control of organisms, trade resources and organisms in a market, and aid evolution by selective breeding. -
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Ubix Linux
The Pocket Datalab
Ubix stands for Universal Business Intelligence Computing System. Ubix Linux is an open-source, Debian-based Linux distribution geared towards data acquisition, transformation, analysis and presentation. Ubix Linux purpose is to offer a tiny but versatile datalab. Ubix Linux is easily accessible, resource-efficient and completely portable on a simple USB key. Ubix Linux is a perfect toolset for learning data analysis and artificial intelligence basics on small to medium datasets. You can find additional information, technical guidance, and user credentials on the project website https://ubix-linux.sourceforge.io/ or on the project subreddit https://reddit.com/r/UbixLinux. -
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Open Pandora's Box
Pandora is an artificial intelligent web based bot
Pandora is an artificial intelligent web based bot written in Java. Pandora is a component based AI architecture including, database memory, XML, voice, voice rec, chat, IRC, HTTP, Wiktionary, Freebase, consciousness, language, GUI, applet, web, jsp, Android -
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The Python Computer Vision Framework is an opened project deisgned for all those interested in computer vision. It aims at making computer vision more easy and structured and matlab-free. It may also be used for other artistic and scientific areas.
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ADAMS
ADAMS is a workflow engine for building complex knowledge workflows.
ADAMS is a flexible workflow engine aimed at quickly building and maintaining data-driven, reactive workflows, easily integrated into business processes. Instead of placing operators on a canvas and manually connecting them, a tree structure and flow control operators determine how data is processed (sequentially/parallel). This allows rapid development and easy maintenance of large workflows, with hundreds or thousands of operators. Operators include machine learning (WEKA, MOA, MEKA) and image processing (ImageJ, JAI, BoofCV, LIRE and Gnuplot). R available using Rserve. WEKA webservice allows other frameworks to use WEKA models. Fast prototyping with Groovy and Jython. Read/write support for various databases and spreadsheet applications. -
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The AK toolkit is another kit for building and use Hidden Markov Models (HMMs). Originally developed for handwritten text recognition (HTR) using Bernoulli HMMs, it also implements diagonal Gaussians and can be used for any other purpose.
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ANNFiD
A forensic file identification tool using neural networks
Just carved a bunch of bytes and have no idea what they could be? Maybe ANNFiD can help. ANNFiD uses neural network to identify byte patterns. It can be trained and has a GUI to help in the process. The tool is still on a very early stage, but could improve exponentially with the help of the developer community -
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ANT is a lightweight implementation in C of a kind of artificial neural net called Multilayer Perceptron, which uses the backpropagation algorithm as learning method. The package includes an introductory example to start using artificial neural nets.
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Botnet Detectors Comparer
Compares botnet detection methods
Compares botnet detection methods by computing the error metrics by reading the labels on a NetFlow file. The original NetFlow should have a new column for the ground-truth label, and a new column with the prediction label for each botnet detection method. This program computes all the error metrics (TPR, TNR, FPR, FNR, Precision, Accuracy, ErrorRate, FMeasure1, FMeasure2, FMeasure0.5) and output the comparison results. It also ouputs a png plot. The program can compare in a flow-by-flow basis, or it can apply our new botnet detection error metrics, that is time-based, detects IP addresses instead of flows and it is weighted to favor sooner detections. See the paper for more details. -
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BreakDancer-0.0.1 is a Perl package that provides genome-wide detection of structural variants from next generation paired-end sequencing reads.
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Ceka
Crowd Environment and its Knowledge Analysis
A knowledge analysis tool for crowdsourcing based on Weka. We also have a Python version of Crowdsourcing Learning: CrowdwiseKit on GitHub (https://github.com/tssai-lab/CrowdwiseKit). -
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DOGMA is a MATLAB toolbox for discriminative online learning. It implements all the state of the art algorithms in a unique and simple framework. Examples are Perceptron, Passive-Aggresive, ALMA, NORMA, SILK, Projectron, RBP, Banditron, etc.
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GNAT
GNAT recognizes gene names in text and maps them to NCBI Entrez Gene
GNAT is a BioNLP/text mining tool to recognize and identify gene/protein names in natural language text. It will detect mentions of genes in text, such as PubMed/Medline abstracts, and disambiguate them to remove false positives and map them to the correct entry in the NCBI Entrez Gene database by gene ID. March 2017: We started to upload GNAT output on Medline. See files/results/medline/. -
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LAML:Linear Algebra and Machine Learning
A stand-alone Java library for linear algebra and machine learning
LAML is a stand-alone pure Java library for linear algebra and machine learning. The goal is to build efficient and easy-to-use linear algebra and machine learning libraries. The reason why linear algebra and machine learning are built together is that full control of the basic data structures for matrices and vectors is required to have fast implementation for machine learning methods. Additionally, LAML provides a lot of commonly used matrix functions in the same signature to MATLAB, thus can also be used to manually convert MATLAB code to Java code. -
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LightSpMV
lightweight GPU-based sparse matrix-vector multiplication (SpMV)
LightSpMV is a novel CUDA-compatible sparse matrix-vector multiplication (SpMv) algorithm using the standard compressed sparse row (CSR) storage format. We have evaluated LightSpMV using various sparse matrices and further compared it to the CSR-based SpMV subprograms in the state-of-the-art CUSP and cuSPARSE. Performance evaluation reveals that on a single Tesla K40c GPU, LightSpMV is superior to both CUSP and cuSPARSE, with a speedup of up to 2.60 and 2.63 over CUSP, and up to 1.93 and 1.79 over cuSPARSE for single and double precision, respectively. -
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The Mars Rover Simulator project is based on the evolutionary robotics paradigm where an artificial agent acquires its skills through the process of artificial evolution. This simulator can be useful to evolve neural network controllers for the rover
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This is a RapidMiner extension replacing the current Weka-Plugin with the updated 3.7.3 Weka-Version. This is basically a branch of the 3.7.3 Version of WEKA wrapped into the old extension. New Features Include: -All the Features of the 3.7.3 Weka Package -Multi-Threaded ensemble learning -An enhancement on the popular RandomForest Learner based on "Dynamic Integration with Random Forests" by Tsymbal et al. 2006 and "Improving Random Forests" by Robnik-Sikonja 2004. -More enhancements to the voting mechanisms in Random Forest -Possibility to output Feature Weights according to the original Breiman Paper 2001
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NN Image Recognition (with source-code)
This is ANN trained application to predict digits from 0 - 9.
It can predict digits from 0-9 with Artificial Neural Network. I trained ANN with 100 samples of each digit. It takes input of 20x20 pixel image and predicts it with Neural Network. It may predict wrong digit due to very low sample data but it work 90% correctly. Note: JRE 1.6 is required to run this application. -
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Highly modularized Reinforcement Learning library for real/simulation robots to learn behaviors. Our ultimate goal is to develop an artificial intelligence (AI) program with which the robots can learn to behave as their users wish.
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cognity
A neural network library for Java.
Cognity is an object-oriented neural network library for Java. It's goal is to provide easy-to-use, high level architecture for neural network computations along with reasonable performance. -
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dashAI
dashAI: an interactive platform for training, evaluating and deploying
dashAI is an open-source, No-code workbench for Exploratory Data Analysis and classical ML. Visual data preparation, multi-model experiments, XAI explainability, and a plugin-based extensible catalog. The platform guides users through a complete, traceable workflow — data ingestion → visual exploration → preprocessing → model training → evaluation → explainability — without writing a single line of code. Each step is explicit and reversible, keeping the user in control rather than delegating decisions to an opaque pipeline. -
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mlpy
Machine Learning Python
mlpy is a Python module for Machine Learning built on top of NumPy/SciPy and of GSL. mlpy provides high-level functions and classes allowing, with few lines of code, the design of rich workflows for classification, regression, clustering and feature selection. mlpy is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License version 3. mlpy is available both for Python >=2.6 and Python 3.X.
