Search Results for "dda"

The Sashimi project hosts the Trans-Proteomic Pipeline (TPP), a mature suite of tools for mass-spec (MS, MS/MS) based proteomics: statistical validation, quantitation, visualization, and converters from raw MS data to the open mzML/mzXML formats.

Calibr is a tool for the spectrum-centric analysis of DIA data against DDA-based spectral library, to perform optimization of spectrum preprocessing and calculating various spectral similarity measures as features for validation. In addition to spectral similarity measures, Calibr provides other two types of features related to precursor ion and spectrum property and statistics from spectrum-spectrum matches (SSMs) for machine-learning based validation. To support users to conveniently conduct...

Here is a nice little class we can use to enumerate each and every point on a line. We are using the Digital Differential Analyzer (DDA) approach. The idea of drawing a simple line is well supported by just about every graphical framework. What is less sure is the ability to enumerate through a set of points so as to choose just which points we are interested in. LineDDA also graphically demonstrates support for Positive Slope, Negative Slope, Zero and No Slope. Source code included...

Java-based paint program using DDA, Bresenham and the Circle algorithm. It is meant to show the implementation of algorithms that are used to draw primitives.

Discrete Dipole Approximation Project, is a software package designed to solve the Discrete Dipole Problem by the Discrete Dipole Approximation (DDA) method. This software is desgined to be plugin operated allowing for easy implimincation of new solver methods to improve the efficienty of the code. The plugin support also allow the program to write its output in multiple formats and structures defined by plugins.