Search Results for "gnu science" - Page 92
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Showing 5828 open source projects for "gnu science"
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A Interactive Network VideoGame
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Intrepid Bioinformatic's Integrative Genomics Viewer (IGV) modifications for viewing NGS files on IGV with data located on remote servers, accessed by web services.
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This project is devoted to the creation of an open source Error-Correcting Output Codes (ECOC) library for the Machine Learning community. The ECOC framework is a powerful tool to deal with multi-class categorization problems.
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The Celera Genome Browser, developed at Celera Genomics as part of Celera's sequencing and annotation of the human genome, and released as open source in 2006.
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HPCP (High Performance Channel Protocol) is a transactional data exchange specification, defining an implementation and usage of HTTPS, XML, SOAP, and LDAP. The EEAT HPCP implementation is written in JAVA.
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PileLine (Pileup pipeLine) is a toolkit for efficient handling of genomic position (GP) files, produced by next-generation sequencing experiments. It is designed to be memory efficient by performing on-disk operations over sorted GP files.
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Pamvotis is a Wireless LAN Simulator for all the current physical layer extentions of the IEEE 802.11 (IEEE 802.11 a/b/g) standard and for the IEEE 802.11e Draft for Quality of Service in WLANs.
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Software to identify cavities and crevices in proteins. The goal is to be able to take a protein structure, and to differentiate between five different types of environments for each residue: buried, surface, interfacial, cavity, or crevice.
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Perso can handle different types of identity card numbers (e.g. German/Austrian ID-card and passport). It can check the numbers for correctness. Also it can extract information from the numbers (e.g. birthday) or generate numbers using custum values.
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DOGMA is a MATLAB toolbox for discriminative online learning. It implements all the state of the art algorithms in a unique and simple framework. Examples are Perceptron, Passive-Aggresive, ALMA, NORMA, SILK, Projectron, RBP, Banditron, etc.
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Korat is a tool for constraint-based generation of structurally complex test inputs for Java programs.
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IMPACT
Integrated Multiprogram Platform for Analyses in ConTest
Graphical User Interface for a software used to assess adaptive evolution in protein-coding genes. Makes use of several known bioinformatics software. IMPACT is free software, targeted to the scientific community. Maldonado E, Dutheil JY, da Fonseca RR, Vasconcelos V, Antunes A (2011) IMPACT: Integrated Multiprogram Platform for Analyses in ConTest. Journal of Heredity, 102 (3): 366-369. doi: https://doi.org/10.1093/jhered/esr003 -
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This is a flexible, extendable, parallel, and distributed supply chain simulator, which creates large scale test data sets for Design Science Projects, especially for large scale EPC systems.
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a program to retrieve magnetic power spectra from Faraday rotation maps using a method described in http://arxiv.org/abs/0912.3930
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SeqAnt is an open source software package that performs rapid, automated annotation of DNA sequence variants (single base mutations, insertions, deletions) discovered with any sequencing platform.
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Metadata.net is a collection of website components and tools for creating and using metadata produced by the eResearch Group at ITEE, University of Queensland.
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Rapid development of portal-based user interfaces for submitting compute jobs to remote compute resources. It supports the mainstream compute engine vendors Sun Grid Engine, PBS and Condor. Get a job-submission portal up and running in a few hours.
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A high-level interface for low-level physics engines used in games, robotics simulations, and other 3D applications. Features a simple C++ API, intuitive objects (e.g. Solids, Joints, Motors, Sensors), and XML-based file storage for complex objects.
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Gri is a language for scientific graphics programming. It is script-based, not GUI-based. Some users view it as a sort of LaTeX for scientific graphics. Users who climb a slight learning curve are rewarded with considerable aesthetic power.
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Web interface for python math modules. Developed with web2py. It uses pure python modules for easy deployment . Math2py requires the mpmath library installed with web2py. Download and unzip mpmath in web2py/site-packages
