Search Results for "gnu science" - Page 73
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Showing 5828 open source projects for "gnu science"
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Virtual Sound Level Meter
Virtual Sound Level Meter for analyzing calibrated sound files
This project is the MATLAB development of a virtual sound level meter. The program will read in a calibrated .wav file and allow the user to analyze it as one would analyze a sound field with a sound level meter. The software implements Fast, Slow, Impulse and LEQ; A, C and Flat Weighting; Ln and Noise Dose analysis; Octave and 1/3 Octave band analysis; high resolution FFT analysis and spectrograms. Band analysis can be made using fast FFT methods or slower, but ANSI standard... -
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pyisocalc
Isotopic pattern calculator in python 2.x
This is an isotopic pattern calculator written in python. It depends on re, sys, numpy, operator, itertools, and matplotlib. -
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MID Adjust
Prepare reads with no MIDs or variable length MIDs for analysis
Prepare reads for Pyrotagger or QIIME analysis Pyrotagger only accepts sequencing reads that have MID sequences (a.k.a barcodes, tags), and all of them must have the same length. When you have no MIDs, or variable-length MIDs, MID Adjust appends new MIDs or extends existing ones to satisfy Pyrotagger requirements. New features include the ability to generate fake quality scores and to parse and generate QIIME mapping files. -
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PolyBoRi is implemented as a C++ library for Polynomials over Boolean Rings, which provides high-level data types for Boolean polynomials. A python-interface yields extensible algorithms for computing Groebner bases over Boolean Rings.
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multipsq
Analysis of pyrograms form multiplex pyrosequencing experiments
A software for the classification of organisms based on results from multiplex pyrosequencing algorithms performed on the Pyro-Mark ID System (Qiagen). The assays can be designed using the software mpsqed available from https://sourceforge.net/projects/mpsqed/ Pyrosequencing can be applied for Single-Nucleotide-Polymorphism (SNP)-based pathogen typing or for providing sequence information of short DNA stretches. However, for some pathogens molecular typing cannot be performed relying on a... -
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Analysis of biochemical networks.
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MicroBlog #255
Скрипт коллективного микроблоггинга.
Ohloh: http://ohloh.net/p/mb255 Source(Git): https://github.com/agmanix/mb255 VK group: http://vk.com/mb255 -
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Root Lounge - Mumble Skin
A Skin for Mumble
Spice up your Mumble experience using this recreation of 4 different skins merged and adjusted into a new one. It is tested and running stable using Mumble 1.2.x. To install: Download, extract and follow the readme.txt contained in the archive. All credits go to the devs of the individual pieces including Mumble itself. -
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NeedlemanWunsch
Fast global sequence alignment for the masses!
MOVED TO GITHUB: https://github.com/noporpoise/seq-align Global optimal sequence alignment using the Needleman-Wunsch algorithm. Aligns DNA, RNA, protein sequence and more! See our sister project local alignment using Smith-Waterman: http://sourceforge.net/projects/smithwaterman/ -
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The term "question-answer paradigm" (QAP) is used in psycho-linguistics to refer to a familiar mode of human discourse. QAParadigm facilitates a common QAP experiment that involves a visual display, then a verbal question about the display.
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SEG-Y files need special compression because they don't compress well using gzip and the like. The code is cross-platform C++ using nothing else than standard system libraries. This is a spin-off from the OpendTect project (http://opendtect.org).
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Ardamon
Arduino-controlled thermostat and sensors management
Ardamon is an arduino and PHP based solution to replace your thermostat so you gain a open-source solution that is manageable online. It also offers statistics and can help regulate many sensors around your house -
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VSMOExp
Ontologies, which are made up by standardized and defined controlled
Ontologies, which are made up by standardized and defined controlled vocabulary terms and their inter-relationships, are comprehensive and readily searchable repositories for knowledge in a given domain -
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Multiagentsystem Ellipsis
Modular, agent-oriented and extendable agent toolkit.
Ellipsis is a modular, agent-oriented, and extendable toolkit to execute stationary and mobile software agents written in the Java programming language. Ellipsis uses the standard application server JBoss (version 4.2.3 GA) without any modifications. In contrast to existing mobile agent toolkits, Ellipsis has an agent- and message-oriented architecture. Ellipsis is built on top of the JMX architecture. Core Ellipsis components are implemented as MBeans which provides for basic ser-vices... -
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siMacro is simple GUI tool for cell based genome wide siRNA screen data processing. It calculates statistical parameters such as Z score and robust Z score.
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mesoFON
mesoFON is an individual-based mangrove forest model, a KiWi extension
mesoFON is an individual-based mangrove forest model. It is a Java implementation of the KiWi model done with RePast Simphony. It contains several new features: (1) You can add up to 10 species via the GUI. However, in principle, the number of species to be included programmatically is unlimited. (2) You can use a variety of growth functions via typing them in as a string on the GUI. (3) The model is transparent, sinc it comes with the Eclipse workbench of RePast. -
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A C++ library for Quadratic Programming which implements the Goldfarb-Idnani active-set dual method. At present it is limited to the solution of strictly convex quadratic programs. The project has moved to GitHub (https://github.com/liuq/QuadProgpp).
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The FAKE GAME tool uses natural evolution to evolve Data Mining models. It incorporates several preprocessing, optimization and visualization methods aimed to streamline the Knowledge Discovery process. Knowledge Extraction from data is being automated!
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A pure dynamic operating system for embedded devices, currently targeting wireless sensor devices, Lorien is unique in its core philosophy of building to evolve rather than simply building to abstract.
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Efficient analysis of complex networks using hierarchical clustering. If you use Jerarca, please cite: Aldecoa R, Marín I (2010) Jerarca: Efficient analysis of complex networks using hierarchical clustering PLoS ONE 5(7): e11585
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ENGRID is a mesh generation software with CFD applications in mind. It supports automatic prismatic boundary layer grids for Navier-Stokes simulations and has a Qt based GUI.
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OctoMap
Moved to new location: http://octomap.github.com/
A probabilistic, flexible, and compact 3D mapping library for robotic systems. OctoMap provides efficient occupancy grid mapping in 3D using octrees. OctoMap development has moved to http://octomap.github.com/ -
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