Search Results for "k-phon" - Page 6
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Showing 336 open source projects for "k-phon"
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BayesRate
Bayesian estimation of diversification rates
BayesRate is a program to estimate speciation and extinction rates from dated phylogenies in a Bayesian framework. The methods are described in: Silvestro, D., Schnitzler, J. and Zizka, G. (2011) A Bayesian framework to estimate diversification rates and their variation through time and space. BMC Evolutionary Biology, 11, 311 Silvestro D., Zizka G. & Schulte K. (2014) Disentangling the effects of key innovations on the diversification of Bromelioideae (Bromeliaceae). Evolution, 68, 163... -
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2d Heat advection Parallelized
MPI based Parallelized C Program code to solve for 2D heat advection.
Type - 2D Grid - Structured Cartesian Case - Heat advection Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit, QUICK Temporal - Unsteady Parallelized - MPI (for cluster environment) Inputs: [ Length of domain (LX,LY) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup: The left and top edges are heated to 100 C and the right and bottom... -
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3D Heat advection C code
A C Program code to solve for Heat advection in 3D Cartesian grid.
Type - 3D Grid - Structured Cartesian Case - Heat advection Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit, QUICK Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LX,LY,LZ) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup : The left, top and inside plane boundary is at 100 C and the right, bottom and outside plane... -
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2D Heat advection C code
A C Program code to solve for Heat advection in 2D Cartesian grid.
Type - 2D Grid - Structured Cartesian Case - Heat advection Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit, QUICK Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LX,LY) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup : The left and top boundary is at 100 C and the right and bottom boundary is at 0 C. The flow... -
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3D Heat convection C code
A C Program code to solve for Heat convection in 3D Cartesian grid.
Type - 3D Grid - Structured Cartesian Case - Heat convection Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit, QUICK Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LX,LY) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup : The top, bottom, front and back boundaries are heated to 100 C. The left boundary is inlet... -
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2D Heat convection C code
A C Program code to solve for Heat convection in 2D Cartesian grid.
Type - 2D Grid - Structured Cartesian Case - Heat convection Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit, QUICK Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LX,LY) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup : The top and bottom boundaries are heated to 100 C. The left boundary is inlet (Velocity = 1m... -
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Belief Reviser
Belief Revision via PS-Merge under constraints belief merging operator
Belief revision is a central topic in knowledge representation and reasoning. It consists in incorporating a new belief, changing as few as possible of the original beliefs while preserving consistency. Revision always considers new evidence as a better belief. Such new evidence is usually represented in the form of a propositional formula which must be preserved after the revision. Here, the Δps (PS-Merge) belief merging operator is extended in order to consider constraints, and ... -
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2d axisymmetric heat diffusion C code
A C Program code to solve for Heat diffusion in 2D Axi-symmetric grid.
Type - 2D Grid - Axisymmetric Case - Heat diffusion Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LR,LZ) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup - Periphery heated to 200 C Top to 300 C Bottom to 100 C -
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3d axisymmetric heat diffusion C code
A C Program code to solve for Heat diffusion in 3D Axi-symmetric grid.
Type - 3D Grid - Axisymmetric Case - Heat diffusion Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LR,LZ,LH) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup - Periphery heated to 500 C Top to 500 C Bottom to 500 C -
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3d heat conduction parallelized
MPI based Parallelized C Program code to solve for 3D heat conduction.
Type - 3D Grid - Structured Cartesian Case - Heat conduction Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - Yes Inputs: [ Length of domain (LX,LY,LZ) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup : The six boundaries are heated to 100 C, 200 C, 300 C, 400 C, 500 C, 600 C respectively. -
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Shared Mobile Sms - Client
Klientská aplikácia Zdieľaného mobilu
Táto časť aplikácia slúži na pripojenia sa k serverovej časti "Shared Mobile Sms" -
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Circuit simulator SPECI-SPICE
Circuit simulators like SPICE for low memory computers
SPECI-SPICE is a subset of SPICE intended to run on low powered computers like Amstrad CPC, ZX Spectrum, CP/M machines, old PC machines, some programmable calculators,etc. by keeping most important functionality of SPICE 2. -
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This project is now upgraded as educational resource planning tool including LMS (learning management system). Now DEI, AVV K, IITR, NITH, AMU, JMI, IGNOU, SMVDU are partnering in this. Overall coordination is done by IIT Kanpur.
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3d Heat conduction C code
A C Program code to solve for Heat conduction in 3D Cartesian grid.
Type - 3D Grid - Structured Cartesian Case - Heat Conduction Method - Finite Volume Method Approach - Flux based Accuracy - First order Scheme - Explicit Temporal - Unsteady Parallelized - No Inputs: [ Length of domain (LX,LY,LZ) Time step - DT Material properties - Conductivity (k or kk) Density - (rho) Heat capacity - (cp) Boundary condition and Initial condition. ] Setup : The six boundaries are heated to 100 C, 200 C, 300 C, 400 C, 500 C and 600 C respectively. -
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QueueSimulator
Simulator of G/G/k queue systems used in computer networks.
QueueSimulator is a free software which aims to simulate primarily G/G/k queueing systems that are used in computer networks. But it can be used to simulate practically any stable queue system. -
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de novo assembly validation
de novo clustering of assembled contigs into two groups
This project deals with de novo assembled contigs to cluster them into two groups forming the lengthwise clusters. These two groups are correctly assembled contigs and wrongly assembled contigs. For non-model organisms, without reference genome, it is very hard to state that which contig is correct and which is not. With this project, the proposed unsupervised clustering method (K-means) based clustering is done utilizing the depth of reads mapping based coverage information. The coverage based... -
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GA-EoC
GeneticAlgorithm-based search for Heterogeneous Ensemble Combinations
In data classification, there are no particular classifiers that perform consistently in every case. This is even worst in case of both the high dimensional and class-imbalanced datasets. To overcome the limitations of class-imbalanced data, we split the dataset using a random sub-sampling to balance them. Then, we apply the (alpha,beta)-k feature set method to select a better subset of features and combine their outputs to get a consolidated feature set for classifier training... -
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Crossfilter
Fast n-dimensional filtering and grouping of records
... and reducing is significantly faster than starting from scratch. Crossfilter uses sorted indexes (and a few bit-twiddling hacks) to make this possible, dramatically increasing the performance of live histograms and top-K lists. Crossfilter is available under the Apache License. -
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2. Tune kernel Ridge MM (HPC parallel)
Shell/R program which tunes kernel Ridge by parallel computing
A shell/R program for HPC Linux clusters which allows users to estimate the optimal rate of decay parameter for kernel Ridge regression, within the mixed model framework, for prediction. The optimal rate of decay is estimated using K-folds cross validation parallelized using cluster nodes. -
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Zebrafish Image Processing
Software collection for zebrafish image processing
Software collection for zebrafish image processing (under construction), including an Excel table for related tools and method papers, see also survey paper: Mikut, R.; Dickmeis, T.; Driever, W.; Geurts, P.; Hamprecht, F.; Kausler, B. X.; Ledesma-Carbayo, M. J.; Marée, R.; Mikula, K.; Pantazis, P.; Ronneberger, O.; Santos, A.; Stotzka, R.; Strähle, U. & Peyriéras, N. Automated Processing of Zebrafish Imaging Data - A Survey Zebrafish, 2013 -
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Common Core Interactive Assessment Grid
An interactive assessment grid for the Common Core State Standards
The Common Core Interactive Assessment Grid is now available for ALL Common Core standards! This is an interactive assessment grid in the form of an Excel spreadsheet with all Common Core State Standards for English Language Arts & Literacy in History/Social Studies, Science, and Technical Subjects as well as Mathematics! You can use it to mark your students and investigate the entire Common Core State Standards. The assessment grid has been made to be easy to use and navigate. Using... -
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MinGW-w64 Arch Linux
MinGW-w64 Repository for Arch Linux
This is an unofficial Arch Linux MinGW-w64 repository. It is based on the mingw-w64 packages in the AUR https://aur.archlinux.org/packages/?K=mingw-w64. To use this repo add the following lines to /etc/pacman.conf [mingw-w64] SigLevel = Optional TrustAll Server = http://downloads.sourceforge.net/project/mingw-w64-archlinux/$arch -
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RAMBO-K
Read Assignment Method Based On K-mers
RAMBO-K is a tool for rapid and sensitive removal of background sequences from Next Generation Sequencing data. Please cite our publication (http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0137896) if you use RAMBO-K. We moved to GitLab, please visit our homepage for latest development. The latest stable versions of RAMBO-K will still be provided here. -
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Scaffold_Builder
Combining de novo and reference-guided assembly with Scaffold_builder
Scaffold_builder is software to order contigs generated by draft sequencing along a reference sequence. Gaps are filled with N's and small overlaps are aligned with Needleman–Wunsch algorithm and the consensus created with IUPAC codes. Scaffold_builder can help in the assembly and annotation of genomes by revealing what is missing and allowing targeted sequencing to close those gaps. (c) Silva GG, Dutilh BE, Matthews TD, Elkins K, Schmieder R, Dinsdale EA, Edwards RA. Please... -
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The"Amip" GUI is intended to provide code examples of the methods proposed in: "Unsupervised image segmentation for microarray spots with irregular contours and inner holes" authors: Bogdan Belean, Monica Borda, Jörg Ackermann, Ina Koch and Ovidiu Balacescu Journal: BMC Bioinformatics, 2015, 16:412 https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0842-3 PDE were used for grid alignment, whereas autocorrelation driven PDE and k-means clustering were used...